RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 C11orf40Q8WZ69 217 aa12.52□□□□□ -0.4
LIMS2-206ENST00000409754 KCTD12Q96CX2 325 aaKnown RBP12.52□□□□□ -0.4
LIMS2-206ENST00000409754 OR14A2Q96R54 314 aa12.52□□□□□ -0.4
LIMS2-206ENST00000409754 SF3B5Q9BWJ5 86 aaKnown RBP12.52□□□□□ -0.4
LIMS2-206ENST00000409754 SRXN1Q9BYN0 137 aa12.52□□□□□ -0.4
LIMS2-206ENST00000409754 PLA2G3Q9NZ20 509 aa12.52□□□□□ -0.4
LIMS2-206ENST00000409754 UGT2A1Q9Y4X1 527 aa12.52□□□□□ -0.4
LIMS2-206ENST00000409754 KCNMB2Q9Y691 235 aa12.52□□□□□ -0.4
LIMS2-206ENST00000409754 TNRC6AQ8NDV7 1962 aaKnown RBP12.52□□□□□ -0.4
LIMS2-206ENST00000409754 ARGFXA6NJG6 315 aa12.51□□□□□ -0.41
LIMS2-206ENST00000409754 TMEM212A6NML5 194 aa12.51□□□□□ -0.41
LIMS2-206ENST00000409754 ZNF879B4DU55 563 aa12.51□□□□□ -0.41
LIMS2-206ENST00000409754 TMCC2O75069 709 aa12.51□□□□□ -0.41
LIMS2-206ENST00000409754 HPNP05981 417 aa12.51□□□□□ -0.41
LIMS2-206ENST00000409754 CCR9P51686 369 aa12.51□□□□□ -0.41
LIMS2-206ENST00000409754 RIDAP52758 137 aaKnown RBP12.51□□□□□ -0.41
LIMS2-206ENST00000409754 CLDN17P56750 224 aa12.51□□□□□ -0.41
LIMS2-206ENST00000409754 CLDN20P56880 219 aa12.51□□□□□ -0.41
LIMS2-206ENST00000409754 DEFB109BQ30KR1 87 aa12.51□□□□□ -0.41
LIMS2-206ENST00000409754 AGAP7PQ5VUJ5 663 aa12.51□□□□□ -0.41
LIMS2-206ENST00000409754 DEGS2Q6QHC5 323 aa12.51□□□□□ -0.41
LIMS2-206ENST00000409754 Q6ZNX1 250 aa12.51□□□□□ -0.41
LIMS2-206ENST00000409754 KRT77Q7Z794 578 aa12.51□□□□□ -0.41
LIMS2-206ENST00000409754 SULF2Q8IWU5 870 aa12.51□□□□□ -0.41
LIMS2-206ENST00000409754 MDS2Q8NDY4 140 aa12.51□□□□□ -0.41
LIMS2-206ENST00000409754 OR10H5Q8NGA6 315 aa12.51□□□□□ -0.41
LIMS2-206ENST00000409754 OR9K2Q8NGE7 335 aa12.51□□□□□ -0.41
LIMS2-206ENST00000409754 OR2V1Q8NHB1 315 aa12.51□□□□□ -0.41
LIMS2-206ENST00000409754 ST7LQ8TDW4 575 aa12.51□□□□□ -0.41
LIMS2-206ENST00000409754 RGP1Q92546 391 aaPredicted RBP12.51□□□□□ -0.41
LIMS2-206ENST00000409754 MCHR2Q969V1 340 aa12.51□□□□□ -0.41
LIMS2-206ENST00000409754 ADGRG7Q96K78 797 aa12.51□□□□□ -0.41
LIMS2-206ENST00000409754 C4orf45Q96LM5 186 aa12.51□□□□□ -0.41
LIMS2-206ENST00000409754 AGAP4Q96P64 663 aa12.51□□□□□ -0.41
LIMS2-206ENST00000409754 UCN2Q96RP3 112 aa12.51□□□□□ -0.41
LIMS2-206ENST00000409754 CCDC32Q9BV29 185 aa12.51□□□□□ -0.41
LIMS2-206ENST00000409754 COMMD4Q9H0A8 199 aa12.51□□□□□ -0.41
LIMS2-206ENST00000409754 ZNF703Q9H7S9 590 aaPredicted RBP12.51□□□□□ -0.41
LIMS2-206ENST00000409754 V9GYH0 126 aa12.51□□□□□ -0.41
LIMS2-206ENST00000409754 ARPC4-TTLL3A0A0A6YYG9 625 aa12.51□□□□□ -0.41
LIMS2-206ENST00000409754 A0A0G2JK05 382 aa12.51□□□□□ -0.41
LIMS2-206ENST00000409754 TRBV5-5A0A0J9YX44 114 aa12.51□□□□□ -0.41
LIMS2-206ENST00000409754 ISPDA4D126 451 aa12.51□□□□□ -0.41
LIMS2-206ENST00000409754 OR5H15A6NDH6 313 aa12.51□□□□□ -0.41
LIMS2-206ENST00000409754 NPIPA2E9PIF3 369 aa12.51□□□□□ -0.41
LIMS2-206ENST00000409754 NPIPA3F8WFD2 350 aa12.51□□□□□ -0.41
LIMS2-206ENST00000409754 EIF1AYO14602 144 aaKnown RBP12.51□□□□□ -0.41
LIMS2-206ENST00000409754 ZNF254O75437 659 aa12.51□□□□□ -0.41
LIMS2-206ENST00000409754 POU3F2P20265 443 aaPredicted RBP12.51□□□□□ -0.41
LIMS2-206ENST00000409754 RAB3BP20337 219 aa12.51□□□□□ -0.41
LIMS2-206ENST00000409754 ENPP1P22413 925 aa12.51□□□□□ -0.41
LIMS2-206ENST00000409754 MAPK3P27361 379 aaPredicted RBP12.51□□□□□ -0.41
LIMS2-206ENST00000409754 CARD18P57730 90 aa12.51□□□□□ -0.41
LIMS2-206ENST00000409754 TBR1Q16650 682 aa12.51□□□□□ -0.41
LIMS2-206ENST00000409754 Q499Y3 187 aa12.51□□□□□ -0.41
LIMS2-206ENST00000409754 HSD17B12Q53GQ0 312 aa12.51□□□□□ -0.41
LIMS2-206ENST00000409754 CARD17Q5XLA6 110 aa12.51□□□□□ -0.41
LIMS2-206ENST00000409754 SLC25A25Q6KCM7 469 aa12.51□□□□□ -0.41
LIMS2-206ENST00000409754 ZNF544Q6NX49 715 aa12.51□□□□□ -0.41
LIMS2-206ENST00000409754 SFXN4Q6P4A7 337 aa12.51□□□□□ -0.41
LIMS2-206ENST00000409754 DCXRQ7Z4W1 244 aa12.51□□□□□ -0.41
LIMS2-206ENST00000409754 SNX29P2Q8IUI4 249 aa12.51□□□□□ -0.41
LIMS2-206ENST00000409754 PRSS35Q8N3Z0 413 aa12.51□□□□□ -0.41
LIMS2-206ENST00000409754 EXTL1Q92935 676 aa12.51□□□□□ -0.41
LIMS2-206ENST00000409754 HES7Q9BYE0 225 aa12.51□□□□□ -0.41
LIMS2-206ENST00000409754 COMMD3Q9UBI1 195 aa12.51□□□□□ -0.41
LIMS2-206ENST00000409754 KLF13Q9Y2Y9 288 aaPredicted RBP12.51□□□□□ -0.41
LIMS2-206ENST00000409754 MED12Q93074 2177 aa12.51□□□□□ -0.41
LIMS2-206ENST00000409754 FREM3P0C091 2139 aa12.5□□□□□ -0.41
LIMS2-206ENST00000409754 IGHV3-15A0A0B4J1V0 119 aa12.5□□□□□ -0.41
LIMS2-206ENST00000409754 H0YC42 278 aa12.5□□□□□ -0.41
LIMS2-206ENST00000409754 SMAD9O15198 467 aaKnown RBP12.5□□□□□ -0.41
LIMS2-206ENST00000409754 PIN1P1O15428 100 aa12.5□□□□□ -0.41
LIMS2-206ENST00000409754 TBX1O43435 398 aa12.5□□□□□ -0.41
LIMS2-206ENST00000409754 NME2P1O60361 137 aa12.5□□□□□ -0.41
LIMS2-206ENST00000409754 SP1P08047 785 aa12.5□□□□□ -0.41
LIMS2-206ENST00000409754 QDPRP09417 244 aa12.5□□□□□ -0.41
LIMS2-206ENST00000409754 NME2P22392 152 aa12.5□□□□□ -0.41
LIMS2-206ENST00000409754 KIR3DL2P43630 455 aa12.5□□□□□ -0.41
LIMS2-206ENST00000409754 ZNF133P52736 654 aaPredicted RBP12.5□□□□□ -0.41
LIMS2-206ENST00000409754 MFAP5Q13361 173 aa12.5□□□□□ -0.41
LIMS2-206ENST00000409754 KCNMB1Q16558 191 aa12.5□□□□□ -0.41
LIMS2-206ENST00000409754 IDNKQ5T6J7 187 aa12.5□□□□□ -0.41
LIMS2-206ENST00000409754 DCDC5Q6ZRR9 648 aa12.5□□□□□ -0.41
LIMS2-206ENST00000409754 CENPSQ8N2Z9 138 aa12.5□□□□□ -0.41
LIMS2-206ENST00000409754 ZNF676Q8N7Q3 588 aa12.5□□□□□ -0.41
LIMS2-206ENST00000409754 SLC39A7Q92504 469 aa12.5□□□□□ -0.41
LIMS2-206ENST00000409754 TMEM54Q969K7 222 aa12.5□□□□□ -0.41
LIMS2-206ENST00000409754 DIRAS2Q96HU8 199 aa12.5□□□□□ -0.41
LIMS2-206ENST00000409754 DERL3Q96Q80 235 aa12.5□□□□□ -0.41
LIMS2-206ENST00000409754 OR2M2Q96R28 347 aa12.5□□□□□ -0.41
LIMS2-206ENST00000409754 TTTY12Q9BZ98 90 aa12.5□□□□□ -0.41
LIMS2-206ENST00000409754 ZCCHC4Q9H5U6 513 aa12.5□□□□□ -0.41
LIMS2-206ENST00000409754 NOX4Q9NPH5 578 aa12.5□□□□□ -0.41
LIMS2-206ENST00000409754 ABCB10Q9NRK6 738 aa12.5□□□□□ -0.41
LIMS2-206ENST00000409754 GLTPQ9NZD2 209 aa12.5□□□□□ -0.41
LIMS2-206ENST00000409754 CYB5R1Q9UHQ9 305 aa12.5□□□□□ -0.41
LIMS2-206ENST00000409754 ADAM30Q9UKF2 790 aa12.5□□□□□ -0.41
LIMS2-206ENST00000409754 LRP12Q9Y561 859 aa12.5□□□□□ -0.41
LIMS2-206ENST00000409754 NCKAP5O14513 1909 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms