RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 AIPO00170 330 aa11.55□□□□□ -0.56
SMARCB1-203ENST00000407082 TFECO14948 347 aaPredicted RBP11.55□□□□□ -0.56
SMARCB1-203ENST00000407082 ZNF208O43345 1280 aa11.55□□□□□ -0.56
SMARCB1-203ENST00000407082 SCO2O43819 266 aa11.55□□□□□ -0.56
SMARCB1-203ENST00000407082 SERPINI2O75830 405 aa11.55□□□□□ -0.56
SMARCB1-203ENST00000407082 ZFAND5O76080 213 aa11.55□□□□□ -0.56
SMARCB1-203ENST00000407082 EIF4EP06730 217 aaKnown RBP11.55□□□□□ -0.56
SMARCB1-203ENST00000407082 YES1P07947 543 aa11.55□□□□□ -0.56
SMARCB1-203ENST00000407082 DAP3P51398 398 aaKnown RBP11.55□□□□□ -0.56
SMARCB1-203ENST00000407082 CCR9P51686 369 aa11.55□□□□□ -0.56
SMARCB1-203ENST00000407082 HCCSP53701 268 aa11.55□□□□□ -0.56
SMARCB1-203ENST00000407082 RAG2P55895 527 aa11.55□□□□□ -0.56
SMARCB1-203ENST00000407082 Q0VFX4 171 aa11.55□□□□□ -0.56
SMARCB1-203ENST00000407082 DYRK1AQ13627 763 aa11.55□□□□□ -0.56
SMARCB1-203ENST00000407082 CARTPTQ16568 116 aa11.55□□□□□ -0.56
SMARCB1-203ENST00000407082 TBRG1Q3YBR2 411 aa11.55□□□□□ -0.56
SMARCB1-203ENST00000407082 SLC18B1Q6NT16 456 aa11.55□□□□□ -0.56
SMARCB1-203ENST00000407082 HDDC2Q7Z4H3 204 aa11.55□□□□□ -0.56
SMARCB1-203ENST00000407082 TOMM5Q8N4H5 51 aa11.55□□□□□ -0.56
SMARCB1-203ENST00000407082 OR4M2Q8NGB6 313 aa11.55□□□□□ -0.56
SMARCB1-203ENST00000407082 OR6N2Q8NGY6 317 aa11.55□□□□□ -0.56
SMARCB1-203ENST00000407082 MFSD8Q8NHS3 518 aa11.55□□□□□ -0.56
SMARCB1-203ENST00000407082 GPR148Q8TDV2 347 aa11.55□□□□□ -0.56
SMARCB1-203ENST00000407082 DEDD2Q8WXF8 326 aa11.55□□□□□ -0.56
SMARCB1-203ENST00000407082 SLC7A6Q92536 515 aa11.55□□□□□ -0.56
SMARCB1-203ENST00000407082 NSMAFQ92636 917 aa11.55□□□□□ -0.56
SMARCB1-203ENST00000407082 SLC25A36Q96CQ1 311 aa11.55□□□□□ -0.56
SMARCB1-203ENST00000407082 S100A16Q96FQ6 103 aaKnown RBP11.55□□□□□ -0.56
SMARCB1-203ENST00000407082 ZNF486Q96H40 463 aaPredicted RBP11.55□□□□□ -0.56
SMARCB1-203ENST00000407082 THOC3Q96J01 351 aaKnown RBP11.55□□□□□ -0.56
SMARCB1-203ENST00000407082 POTEKPQ9BYX7 375 aa11.55□□□□□ -0.56
SMARCB1-203ENST00000407082 MMP28Q9H239 520 aa11.55□□□□□ -0.56
SMARCB1-203ENST00000407082 NOX4Q9NPH5 578 aa11.55□□□□□ -0.56
SMARCB1-203ENST00000407082 SERINC1Q9NRX5 453 aa11.55□□□□□ -0.56
SMARCB1-203ENST00000407082 ACOXLQ9NUZ1 547 aa11.55□□□□□ -0.56
SMARCB1-203ENST00000407082 VSX1Q9NZR4 365 aaPredicted RBP11.55□□□□□ -0.56
SMARCB1-203ENST00000407082 IKZF2Q9UKS7 526 aa11.55□□□□□ -0.56
SMARCB1-203ENST00000407082 COPS3Q9UNS2 423 aa11.55□□□□□ -0.56
SMARCB1-203ENST00000407082 NUBP2Q9Y5Y2 271 aa11.55□□□□□ -0.56
SMARCB1-203ENST00000407082 CACNG2Q9Y698 323 aa11.55□□□□□ -0.56
SMARCB1-203ENST00000407082 MTORP42345 2549 aa11.55□□□□□ -0.56
SMARCB1-203ENST00000407082 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.54□□□□□ -0.56
SMARCB1-203ENST00000407082 TMEM72A0PK05 275 aa11.54□□□□□ -0.56
SMARCB1-203ENST00000407082 PRSS37A4D1T9 235 aa11.54□□□□□ -0.56
SMARCB1-203ENST00000407082 INMT-MINDY4F8WBC2 141 aa11.54□□□□□ -0.56
SMARCB1-203ENST00000407082 NPIPB7O75200 414 aa11.54□□□□□ -0.56
SMARCB1-203ENST00000407082 SERPINA7P05543 415 aa11.54□□□□□ -0.56
SMARCB1-203ENST00000407082 CELA2AP08217 269 aa11.54□□□□□ -0.56
SMARCB1-203ENST00000407082 ALOX5APP20292 161 aa11.54□□□□□ -0.56
SMARCB1-203ENST00000407082 ITGA3P26006 1051 aa11.54□□□□□ -0.56
SMARCB1-203ENST00000407082 RPS11P62280 158 aaKnown RBP eCLIP11.54□□□□□ -0.56
SMARCB1-203ENST00000407082 MRPS15P82914 257 aaKnown RBP11.54□□□□□ -0.56
SMARCB1-203ENST00000407082 MESTQ5EB52 335 aa11.54□□□□□ -0.56
SMARCB1-203ENST00000407082 ATAD3CQ5T2N8 411 aa11.54□□□□□ -0.56
SMARCB1-203ENST00000407082 LIPNQ5VXI9 398 aa11.54□□□□□ -0.56
SMARCB1-203ENST00000407082 ADGRG3Q86Y34 549 aa11.54□□□□□ -0.56
SMARCB1-203ENST00000407082 GALNT16Q8N428 558 aa11.54□□□□□ -0.56
SMARCB1-203ENST00000407082 ZNF676Q8N7Q3 588 aa11.54□□□□□ -0.56
SMARCB1-203ENST00000407082 ZNF511Q8NB15 262 aa11.54□□□□□ -0.56
SMARCB1-203ENST00000407082 APCDD1LQ8NCL9 501 aa11.54□□□□□ -0.56
SMARCB1-203ENST00000407082 OTOSQ8NHW6 89 aa11.54□□□□□ -0.56
SMARCB1-203ENST00000407082 UBASH3BQ8TF42 649 aa11.54□□□□□ -0.56
SMARCB1-203ENST00000407082 DUSP19Q8WTR2 217 aa11.54□□□□□ -0.56
SMARCB1-203ENST00000407082 THEM6Q8WUY1 208 aa11.54□□□□□ -0.56
SMARCB1-203ENST00000407082 LURAP1Q96LR2 239 aa11.54□□□□□ -0.56
SMARCB1-203ENST00000407082 DERL3Q96Q80 235 aa11.54□□□□□ -0.56
SMARCB1-203ENST00000407082 OR14A2Q96R54 314 aa11.54□□□□□ -0.56
SMARCB1-203ENST00000407082 SMAD5Q99717 465 aaKnown RBP11.54□□□□□ -0.56
SMARCB1-203ENST00000407082 ABCG5Q9H222 651 aa11.54□□□□□ -0.56
SMARCB1-203ENST00000407082 TAS2R5Q9NYW4 299 aa11.54□□□□□ -0.56
SMARCB1-203ENST00000407082 STMN3Q9NZ72 180 aa11.54□□□□□ -0.56
SMARCB1-203ENST00000407082 B9D1Q9UPM9 204 aa11.54□□□□□ -0.56
SMARCB1-203ENST00000407082 MPDZO75970 2070 aa11.54□□□□□ -0.56
SMARCB1-203ENST00000407082 PDZD2O15018 2839 aa11.54□□□□□ -0.56
SMARCB1-203ENST00000407082 MED13LQ71F56 2210 aa11.54□□□□□ -0.56
SMARCB1-203ENST00000407082 ADGRG4Q8IZF6 3080 aa11.54□□□□□ -0.56
SMARCB1-203ENST00000407082 NF1P21359 2839 aa11.53□□□□□ -0.56
SMARCB1-203ENST00000407082 TRBV5-5A0A0J9YX44 114 aa11.53□□□□□ -0.56
SMARCB1-203ENST00000407082 IFITM5A6NNB3 132 aa11.53□□□□□ -0.56
SMARCB1-203ENST00000407082 PLPP3O14495 311 aa11.53□□□□□ -0.56
SMARCB1-203ENST00000407082 ATP6V1G1O75348 118 aa11.53□□□□□ -0.56
SMARCB1-203ENST00000407082 ZNF254O75437 659 aa11.53□□□□□ -0.56
SMARCB1-203ENST00000407082 HLA-DQA2P01906 255 aa11.53□□□□□ -0.56
SMARCB1-203ENST00000407082 MST1P26927 711 aa11.53□□□□□ -0.56
SMARCB1-203ENST00000407082 SLC6A1P30531 599 aa11.53□□□□□ -0.56
SMARCB1-203ENST00000407082 GRPRP30550 384 aa11.53□□□□□ -0.56
SMARCB1-203ENST00000407082 PSMB10P40306 273 aa11.53□□□□□ -0.56
SMARCB1-203ENST00000407082 ZNF41P51814 821 aaPredicted RBP11.53□□□□□ -0.56
SMARCB1-203ENST00000407082 CAPZA1P52907 286 aa11.53□□□□□ -0.56
SMARCB1-203ENST00000407082 SOX8P57073 446 aa11.53□□□□□ -0.56
SMARCB1-203ENST00000407082 OR10A3P58181 314 aa11.53□□□□□ -0.56
SMARCB1-203ENST00000407082 CD300CQ08708 224 aa11.53□□□□□ -0.56
SMARCB1-203ENST00000407082 TATDN3Q17R31 274 aa11.53□□□□□ -0.56
SMARCB1-203ENST00000407082 SLC25A35Q3KQZ1 300 aa11.53□□□□□ -0.56
SMARCB1-203ENST00000407082 CEP78Q5JTW2 689 aa11.53□□□□□ -0.56
SMARCB1-203ENST00000407082 FAM27D1Q5T7N8 215 aa11.53□□□□□ -0.56
SMARCB1-203ENST00000407082 FJX1Q86VR8 437 aa11.53□□□□□ -0.56
SMARCB1-203ENST00000407082 NR2C2APQ86WQ0 139 aa11.53□□□□□ -0.56
SMARCB1-203ENST00000407082 TCTE3Q8IZS6 198 aa11.53□□□□□ -0.56
SMARCB1-203ENST00000407082 OR6V1Q8N148 313 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms