RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 PRIMA1Q86XR5 153 aa4.95□□□□□ -1.62
HMGB1P20-201ENST00000402555 ZDHHC13Q8IUH4 622 aa4.95□□□□□ -1.62
HMGB1P20-201ENST00000402555 ARIH2OSQ8N7S6 290 aa4.95□□□□□ -1.62
HMGB1P20-201ENST00000402555 GTF3AQ92664 365 aaKnown RBP4.95□□□□□ -1.62
HMGB1P20-201ENST00000402555 DHRS1Q96LJ7 313 aa4.95□□□□□ -1.62
HMGB1P20-201ENST00000402555 ZNF570Q96NI8 536 aa4.95□□□□□ -1.62
HMGB1P20-201ENST00000402555 RBP7Q96R05 134 aa4.95□□□□□ -1.62
HMGB1P20-201ENST00000402555 FUZQ9BT04 418 aa4.95□□□□□ -1.62
HMGB1P20-201ENST00000402555 ZNF416Q9BWM5 594 aa4.95□□□□□ -1.62
HMGB1P20-201ENST00000402555 RAB1BQ9H0U4 201 aa4.95□□□□□ -1.62
HMGB1P20-201ENST00000402555 ANKRD19PQ9H560 264 aa4.95□□□□□ -1.62
HMGB1P20-201ENST00000402555 RERGLQ9H628 205 aa4.95□□□□□ -1.62
HMGB1P20-201ENST00000402555 DENND2DQ9H6A0 471 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P20-201ENST00000402555 GORASP2Q9H8Y8 452 aa4.95□□□□□ -1.62
HMGB1P20-201ENST00000402555 SIAEQ9HAT2 523 aa4.95□□□□□ -1.62
HMGB1P20-201ENST00000402555 SMURF2Q9HAU4 748 aa4.95□□□□□ -1.62
HMGB1P20-201ENST00000402555 CCNB1IP1Q9NPC3 277 aa4.95□□□□□ -1.62
HMGB1P20-201ENST00000402555 STX18Q9P2W9 335 aaKnown RBP4.95□□□□□ -1.62
HMGB1P20-201ENST00000402555 GRHPRQ9UBQ7 328 aa4.95□□□□□ -1.62
HMGB1P20-201ENST00000402555 REV1Q9UBZ9 1251 aa4.95□□□□□ -1.62
HMGB1P20-201ENST00000402555 SLC7A8Q9UHI5 535 aa4.95□□□□□ -1.62
HMGB1P20-201ENST00000402555 DUSP13Q9UII6 198 aa4.95□□□□□ -1.62
HMGB1P20-201ENST00000402555 MAGEL2Q9UJ55 1249 aa4.95□□□□□ -1.62
HMGB1P20-201ENST00000402555 ADAM21Q9UKJ8 722 aa4.95□□□□□ -1.62
HMGB1P20-201ENST00000402555 AURKCQ9UQB9 309 aa4.95□□□□□ -1.62
HMGB1P20-201ENST00000402555 SIGLEC7Q9Y286 467 aa4.95□□□□□ -1.62
HMGB1P20-201ENST00000402555 TMEM5Q9Y2B1 443 aa4.95□□□□□ -1.62
HMGB1P20-201ENST00000402555 SPEF1Q9Y4P9 236 aa4.95□□□□□ -1.62
HMGB1P20-201ENST00000402555 LOC100509620A0A075B734 347 aa4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 A0A1W2PPW3 197 aa4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 LOC390937A0A1W2PQ73 354 aa4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 PRSS37A4D1T9 235 aa4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 C5orf49A4QMS7 147 aa4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 LRP5LA4QPB2 252 aa4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 A6NIZ1 184 aa4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 M0R233 179 aa4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 DYNC1I1O14576 645 aa4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 XKRYO14609 159 aa4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 SYNGR3O43761 229 aa4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 CD5LO43866 347 aa4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 OR10H3O60404 316 aa4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 ENTPD5O75356 428 aa4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 CRLF1O75462 422 aa4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 NCR1O76036 304 aa4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 GADD45GO95257 159 aa4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 MPZL1O95297 269 aa4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 STAMBPO95630 424 aa4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 PPP1R3DO95685 299 aa4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 GPANK1O95872 356 aa4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 HPXP02790 462 aa4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 FABP3P05413 133 aa4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 CST2P09228 141 aa4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 CSF3P09919 207 aa4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 T-ENOLP0DO92 83 aa4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 IGHV4-31P0DP07 118 aa4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 NAT2P11245 290 aa4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 CTLA4P16410 223 aa4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 ITGA2P17301 1181 aa4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 MSR1P21757 451 aa4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 USF1P22415 310 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 STOMP27105 288 aa4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 RRM2P31350 389 aa4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 APLNRP35414 380 aa4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 WNT5AP41221 380 aa4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 NR4A2P43354 598 aa4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 MAGEB1P43366 347 aa4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 UCP2P55851 309 aa4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 RAP1BP61224 184 aa4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 RPS23P62266 143 aaKnown RBP4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 RAP1AP62834 184 aa4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 LOXL1Q08397 574 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 PPP1R8Q12972 351 aaKnown RBP4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 KRR1Q13601 381 aaKnown RBP4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 ENDOGQ14249 297 aaKnown RBP4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 KRT72Q14CN4 511 aa4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 TRIP10Q15642 601 aa4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 NKPD1Q17RQ9 610 aa4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 TBC1D28Q2M2D7 210 aa4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 ANKDD1AQ495B1 522 aa4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 NRN1LQ496H8 165 aa4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 TMEM255AQ5JRV8 349 aa4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 THEM4Q5T1C6 240 aa4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 C6orf52Q5T4I8 152 aa4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 LCE3BQ5TA77 95 aa4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 FAM27BQ5VT28 67 aa4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 FAM205BPQ63HN1 556 aa4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 RGS7BPQ6MZT1 257 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 ZNF774Q6NX45 483 aa4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 FOXL2NBQ6ZUU3 175 aa4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 PTCHD4Q6ZW05 846 aa4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 RFPL4BQ6ZWI9 263 aa4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 DPPA2Q7Z7J5 298 aa4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 ZER1Q7Z7L7 766 aa4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 ZDHHC21Q8IVQ6 265 aa4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 ZNF101Q8IZC7 436 aa4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 CCDC197Q8NCU1 140 aa4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 OR1J1Q8NGS3 322 aa4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 FANK1Q8TC84 345 aa4.94□□□□□ -1.62
HMGB1P20-201ENST00000402555 UTP4Q969X6 686 aaKnown RBP4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms