RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 SUB1P53999 127 aaKnown RBP eCLIP3.1□□□□□ -1.91
XRN1-202ENST00000392981 SNRNP35Q16560 246 aaKnown RBP3.1□□□□□ -1.91
XRN1-202ENST00000392981 C2CD6Q53TS8 623 aa3.1□□□□□ -1.91
XRN1-202ENST00000392981 SCD5Q86SK9 330 aa3.1□□□□□ -1.91
XRN1-202ENST00000392981 SLC13A5Q86YT5 568 aaPredicted RBP3.1□□□□□ -1.91
XRN1-202ENST00000392981 MS4A15Q8N5U1 240 aa3.1□□□□□ -1.91
XRN1-202ENST00000392981 OR5B17Q8NGF7 314 aa3.1□□□□□ -1.91
XRN1-202ENST00000392981 OR52N5Q8NH56 324 aa3.1□□□□□ -1.91
XRN1-202ENST00000392981 ADAMTS16Q8TE57 1224 aa3.1□□□□□ -1.91
XRN1-202ENST00000392981 SMAP2Q8WU79 429 aaPredicted RBP3.1□□□□□ -1.91
XRN1-202ENST00000392981 SKA2Q8WVK7 121 aaPredicted RBP3.1□□□□□ -1.91
XRN1-202ENST00000392981 NELFBQ8WX92 580 aa3.1□□□□□ -1.91
XRN1-202ENST00000392981 ZNF285Q96NJ3 590 aa3.1□□□□□ -1.91
XRN1-202ENST00000392981 ECSITQ9BQ95 431 aa3.1□□□□□ -1.91
XRN1-202ENST00000392981 C6orf62Q9GZU0 229 aaPredicted RBP3.1□□□□□ -1.91
XRN1-202ENST00000392981 PORCNQ9H237 461 aa3.1□□□□□ -1.91
XRN1-202ENST00000392981 OR51B5Q9H339 312 aa3.1□□□□□ -1.91
XRN1-202ENST00000392981 GPATCH2LQ9NWQ4 482 aa3.1□□□□□ -1.91
XRN1-202ENST00000392981 GPATCH8Q9UKJ3 1502 aaKnown RBP3.1□□□□□ -1.91
XRN1-202ENST00000392981 IDSB3KWA1 339 aa3.1□□□□□ -1.91
XRN1-202ENST00000392981 PRKYO43930 277 aa3.1□□□□□ -1.91
XRN1-202ENST00000392981 RBBP9O75884 186 aa3.1□□□□□ -1.91
XRN1-202ENST00000392981 B3GAT3O94766 335 aa3.1□□□□□ -1.91
XRN1-202ENST00000392981 FAM107AO95990 144 aa3.1□□□□□ -1.91
XRN1-202ENST00000392981 HBE1P02100 147 aa3.1□□□□□ -1.91
XRN1-202ENST00000392981 DCNP07585 359 aaKnown RBP3.1□□□□□ -1.91
XRN1-202ENST00000392981 FCGR3AP08637 254 aa3.1□□□□□ -1.91
XRN1-202ENST00000392981 XRCC1P18887 633 aaPredicted RBP3.1□□□□□ -1.91
XRN1-202ENST00000392981 BGNP21810 368 aa3.1□□□□□ -1.91
XRN1-202ENST00000392981 S100A2P29034 98 aa3.1□□□□□ -1.91
XRN1-202ENST00000392981 PRKXP51817 358 aa3.1□□□□□ -1.91
XRN1-202ENST00000392981 RAB8AP61006 207 aa3.1□□□□□ -1.91
XRN1-202ENST00000392981 TAB1Q15750 504 aa3.1□□□□□ -1.91
XRN1-202ENST00000392981 LRRC36Q1X8D7 754 aa3.1□□□□□ -1.91
XRN1-202ENST00000392981 ACSF3Q4G176 576 aaPredicted RBP3.1□□□□□ -1.91
XRN1-202ENST00000392981 CEACAM19Q7Z692 300 aa3.1□□□□□ -1.91
XRN1-202ENST00000392981 KCNMB4Q86W47 210 aa3.1□□□□□ -1.91
XRN1-202ENST00000392981 TEX45Q8NA69 505 aa3.1□□□□□ -1.91
XRN1-202ENST00000392981 ZNF555Q8NEP9 628 aa3.1□□□□□ -1.91
XRN1-202ENST00000392981 FCAMRQ8WWV6 532 aa3.1□□□□□ -1.91
XRN1-202ENST00000392981 ARPC1AQ92747 370 aa3.1□□□□□ -1.91
XRN1-202ENST00000392981 MYEOVQ96EZ4 313 aa3.1□□□□□ -1.91
XRN1-202ENST00000392981 PACRGQ96M98 296 aaPredicted RBP3.1□□□□□ -1.91
XRN1-202ENST00000392981 SUCNR1Q9BXA5 334 aa3.1□□□□□ -1.91
XRN1-202ENST00000392981 PECRQ9BY49 303 aa3.1□□□□□ -1.91
XRN1-202ENST00000392981 ELOVL4Q9GZR5 314 aa3.1□□□□□ -1.91
XRN1-202ENST00000392981 LAT2Q9GZY6 243 aa3.1□□□□□ -1.91
XRN1-202ENST00000392981 TMEM74BQ9NUR3 256 aa3.1□□□□□ -1.91
XRN1-202ENST00000392981 NLE1Q9NVX2 485 aaPredicted RBP3.1□□□□□ -1.91
XRN1-202ENST00000392981 PCYOX1Q9UHG3 505 aa3.1□□□□□ -1.91
XRN1-202ENST00000392981 RNF115Q9Y4L5 304 aa3.1□□□□□ -1.91
XRN1-202ENST00000392981 AP4S1Q9Y587 144 aa3.1□□□□□ -1.91
XRN1-202ENST00000392981 RTL1A6NKG5 1358 aa3.09□□□□□ -1.91
XRN1-202ENST00000392981 PZPP20742 1482 aa3.09□□□□□ -1.91
XRN1-202ENST00000392981 A0A0G2JNG1 304 aa3.09□□□□□ -1.91
XRN1-202ENST00000392981 DBX1A6NMT0 343 aa3.09□□□□□ -1.91
XRN1-202ENST00000392981 USP27XA6NNY8 438 aa3.09□□□□□ -1.91
XRN1-202ENST00000392981 KPNA4O00629 521 aaPredicted RBP3.09□□□□□ -1.91
XRN1-202ENST00000392981 IFNA21P01568 189 aa3.09□□□□□ -1.91
XRN1-202ENST00000392981 JCHAINP01591 159 aa3.09□□□□□ -1.91
XRN1-202ENST00000392981 FGF3P11487 239 aaPredicted RBP3.09□□□□□ -1.91
XRN1-202ENST00000392981 CDH1P12830 882 aa3.09□□□□□ -1.91
XRN1-202ENST00000392981 ATF1P18846 271 aa3.09□□□□□ -1.91
XRN1-202ENST00000392981 RAB4BP61018 213 aa3.09□□□□□ -1.91
XRN1-202ENST00000392981 ILF3Q12906 894 aaKnown RBP eCLIP3.09□□□□□ -1.91
XRN1-202ENST00000392981 KIR2DS5Q14953 304 aa3.09□□□□□ -1.91
XRN1-202ENST00000392981 PPP1R3AQ16821 1122 aa3.09□□□□□ -1.91
XRN1-202ENST00000392981 CCDC58Q4VC31 144 aa3.09□□□□□ -1.91
XRN1-202ENST00000392981 ACSM3Q53FZ2 586 aa3.09□□□□□ -1.91
XRN1-202ENST00000392981 CST9Q5W186 159 aa3.09□□□□□ -1.91
XRN1-202ENST00000392981 FAM131AQ6UXB0 335 aa3.09□□□□□ -1.91
XRN1-202ENST00000392981 LFNGQ8NES3 379 aa3.09□□□□□ -1.91
XRN1-202ENST00000392981 PIGXQ8TBF5 258 aa3.09□□□□□ -1.91
XRN1-202ENST00000392981 RERGQ96A58 199 aaPredicted RBP3.09□□□□□ -1.91
XRN1-202ENST00000392981 RCN3Q96D15 328 aa3.09□□□□□ -1.91
XRN1-202ENST00000392981 OSBPL11Q9BXB4 747 aa3.09□□□□□ -1.91
XRN1-202ENST00000392981 DEFB129Q9H1M3 183 aa3.09□□□□□ -1.91
XRN1-202ENST00000392981 SYT4Q9H2B2 425 aa3.09□□□□□ -1.91
XRN1-202ENST00000392981 MFSD1Q9H3U5 465 aa3.09□□□□□ -1.91
XRN1-202ENST00000392981 TMEM27Q9HBJ8 222 aa3.09□□□□□ -1.91
XRN1-202ENST00000392981 CTPS2Q9NRF8 586 aa3.09□□□□□ -1.91
XRN1-202ENST00000392981 SCN3BQ9NY72 215 aa3.09□□□□□ -1.91
XRN1-202ENST00000392981 ING4Q9UNL4 249 aa3.09□□□□□ -1.91
XRN1-202ENST00000392981 LSM5Q9Y4Y9 91 aaKnown RBP3.09□□□□□ -1.91
XRN1-202ENST00000392981 KNDC1Q76NI1 1749 aa3.09□□□□□ -1.91
XRN1-202ENST00000392981 XRN1Q8IZH2 1706 aaKnown RBP3.09□□□□□ -1.91
XRN1-202ENST00000392981 CPDO75976 1380 aa3.09□□□□□ -1.91
XRN1-202ENST00000392981 FREM2Q5SZK8 3169 aa3.09□□□□□ -1.91
XRN1-202ENST00000392981 TEX13DA0A0J9YY54 714 aaPredicted RBP3.09□□□□□ -1.91
XRN1-202ENST00000392981 TEX48A0A1B0GUV7 120 aa3.09□□□□□ -1.91
XRN1-202ENST00000392981 ATP6V1G2-DDX39BF2Z307 99 aa3.09□□□□□ -1.91
XRN1-202ENST00000392981 RNASEK-C17orf49H0YIS7 233 aa3.09□□□□□ -1.91
XRN1-202ENST00000392981 GABRPO00591 440 aa3.09□□□□□ -1.91
XRN1-202ENST00000392981 TGOLN2O43493 480 aa3.09□□□□□ -1.91
XRN1-202ENST00000392981 GLSO94925 669 aaPredicted RBP3.09□□□□□ -1.91
XRN1-202ENST00000392981 PRSS56P0CW18 603 aa3.09□□□□□ -1.91
XRN1-202ENST00000392981 SLCO1A2P46721 670 aa3.09□□□□□ -1.91
XRN1-202ENST00000392981 GNG2P59768 71 aa3.09□□□□□ -1.91
XRN1-202ENST00000392981 RPL31P62899 125 aaKnown RBP3.09□□□□□ -1.91
XRN1-202ENST00000392981 ARFRP1Q13795 201 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms