RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 LIN7BQ9HAP6 207 aa7.8□□□□□ -1.16
SNRNP40-202ENST00000373720 MRPL22Q9NWU5 206 aaKnown RBP7.8□□□□□ -1.16
SNRNP40-202ENST00000373720 SLCO1C1Q9NYB5 712 aa7.8□□□□□ -1.16
SNRNP40-202ENST00000373720 MED11Q9P086 117 aa7.8□□□□□ -1.16
SNRNP40-202ENST00000373720 UPB1Q9UBR1 384 aa7.8□□□□□ -1.16
SNRNP40-202ENST00000373720 FBXL3Q9UKT7 428 aa7.8□□□□□ -1.16
SNRNP40-202ENST00000373720 ING4Q9UNL4 249 aa7.8□□□□□ -1.16
SNRNP40-202ENST00000373720 RCE1Q9Y256 329 aa7.8□□□□□ -1.16
SNRNP40-202ENST00000373720 HS3ST3B1Q9Y662 390 aa7.8□□□□□ -1.16
SNRNP40-202ENST00000373720 UNC13CQ8NB66 2214 aa7.79□□□□□ -1.16
SNRNP40-202ENST00000373720 TNRC18O15417 2968 aaPredicted RBP7.79□□□□□ -1.16
SNRNP40-202ENST00000373720 TMEM269A0A1B0GVZ9 245 aa7.79□□□□□ -1.16
SNRNP40-202ENST00000373720 TMEM221A6NGB7 291 aa7.79□□□□□ -1.16
SNRNP40-202ENST00000373720 BOLA2-SMG1P6H3BVE0 249 aa7.79□□□□□ -1.16
SNRNP40-202ENST00000373720 M0R296 226 aa7.79□□□□□ -1.16
SNRNP40-202ENST00000373720 DCTN6O00399 190 aa7.79□□□□□ -1.16
SNRNP40-202ENST00000373720 PIN1P1O15428 100 aa7.79□□□□□ -1.16
SNRNP40-202ENST00000373720 RBBP9O75884 186 aa7.79□□□□□ -1.16
SNRNP40-202ENST00000373720 NCR1O76036 304 aa7.79□□□□□ -1.16
SNRNP40-202ENST00000373720 TGM6O95932 706 aa7.79□□□□□ -1.16
SNRNP40-202ENST00000373720 P04436 131 aa7.79□□□□□ -1.16
SNRNP40-202ENST00000373720 ALDOBP05062 364 aa7.79□□□□□ -1.16
SNRNP40-202ENST00000373720 UMODP07911 640 aa7.79□□□□□ -1.16
SNRNP40-202ENST00000373720 CHRM2P08172 466 aa7.79□□□□□ -1.16
SNRNP40-202ENST00000373720 SPARCP09486 303 aa7.79□□□□□ -1.16
SNRNP40-202ENST00000373720 PGA4P0DJD7 388 aa7.79□□□□□ -1.16
SNRNP40-202ENST00000373720 PGA3P0DJD8 388 aa7.79□□□□□ -1.16
SNRNP40-202ENST00000373720 LIFP15018 202 aa7.79□□□□□ -1.16
SNRNP40-202ENST00000373720 CPN1P15169 458 aa7.79□□□□□ -1.16
SNRNP40-202ENST00000373720 CTLA4P16410 223 aa7.79□□□□□ -1.16
SNRNP40-202ENST00000373720 IGFBP3P17936 291 aaPredicted RBP7.79□□□□□ -1.16
SNRNP40-202ENST00000373720 TBPP20226 339 aa7.79□□□□□ -1.16
SNRNP40-202ENST00000373720 HSD11B1P28845 292 aa7.79□□□□□ -1.16
SNRNP40-202ENST00000373720 MPLP40238 635 aa7.79□□□□□ -1.16
SNRNP40-202ENST00000373720 SUCLG1P53597 346 aaKnown RBP7.79□□□□□ -1.16
SNRNP40-202ENST00000373720 HCCSP53701 268 aa7.79□□□□□ -1.16
SNRNP40-202ENST00000373720 CAV3P56539 151 aa7.79□□□□□ -1.16
SNRNP40-202ENST00000373720 RAC3P60763 192 aa7.79□□□□□ -1.16
SNRNP40-202ENST00000373720 GPR176Q14439 515 aa7.79□□□□□ -1.16
SNRNP40-202ENST00000373720 RAB11BQ15907 218 aa7.79□□□□□ -1.16
SNRNP40-202ENST00000373720 C1orf100Q5SVJ3 147 aa7.79□□□□□ -1.16
SNRNP40-202ENST00000373720 METTL11BQ5VVY1 283 aa7.79□□□□□ -1.16
SNRNP40-202ENST00000373720 OLFML2AQ68BL7 652 aa7.79□□□□□ -1.16
SNRNP40-202ENST00000373720 FAM166AQ6J272 317 aa7.79□□□□□ -1.16
SNRNP40-202ENST00000373720 FOXL2NBQ6ZUU3 175 aa7.79□□□□□ -1.16
SNRNP40-202ENST00000373720 SYT9Q86SS6 491 aa7.79□□□□□ -1.16
SNRNP40-202ENST00000373720 ELMOD2Q8IZ81 293 aa7.79□□□□□ -1.16
SNRNP40-202ENST00000373720 ZNF433Q8N7K0 673 aaPredicted RBP7.79□□□□□ -1.16
SNRNP40-202ENST00000373720 WDSUB1Q8N9V3 476 aa7.79□□□□□ -1.16
SNRNP40-202ENST00000373720 GJC3Q8NFK1 279 aa7.79□□□□□ -1.16
SNRNP40-202ENST00000373720 OR10G3Q8NGC4 313 aa7.79□□□□□ -1.16
SNRNP40-202ENST00000373720 ST7LQ8TDW4 575 aa7.79□□□□□ -1.16
SNRNP40-202ENST00000373720 ASB5Q8WWX0 329 aa7.79□□□□□ -1.16
SNRNP40-202ENST00000373720 SCMH1Q96GD3 660 aa7.79□□□□□ -1.16
SNRNP40-202ENST00000373720 TSSK2Q96PF2 358 aa7.79□□□□□ -1.16
SNRNP40-202ENST00000373720 ABHD1Q96SE0 405 aa7.79□□□□□ -1.16
SNRNP40-202ENST00000373720 UTP23Q9BRU9 249 aaKnown RBP7.79□□□□□ -1.16
SNRNP40-202ENST00000373720 CACNG6Q9BXT2 260 aa7.79□□□□□ -1.16
SNRNP40-202ENST00000373720 ALX4Q9H161 411 aaPredicted RBP7.79□□□□□ -1.16
SNRNP40-202ENST00000373720 SLA2Q9H6Q3 261 aa7.79□□□□□ -1.16
SNRNP40-202ENST00000373720 GPN1Q9HCN4 374 aaPredicted RBP7.79□□□□□ -1.16
SNRNP40-202ENST00000373720 NUFIP1Q9UHK0 495 aaKnown RBP7.79□□□□□ -1.16
SNRNP40-202ENST00000373720 OR52A1Q9UKL2 312 aa7.79□□□□□ -1.16
SNRNP40-202ENST00000373720 TCFL5Q9UL49 500 aa7.79□□□□□ -1.16
SNRNP40-202ENST00000373720 FARSAQ9Y285 508 aaKnown RBP7.79□□□□□ -1.16
SNRNP40-202ENST00000373720 COA3Q9Y2R0 106 aaPredicted RBP7.79□□□□□ -1.16
SNRNP40-202ENST00000373720 AK6Q9Y3D8 172 aaKnown RBP7.79□□□□□ -1.16
SNRNP40-202ENST00000373720 LRP12Q9Y561 859 aa7.79□□□□□ -1.16
SNRNP40-202ENST00000373720 REV3LO60673 3130 aa7.79□□□□□ -1.16
SNRNP40-202ENST00000373720 HEATR5AQ86XA9 2040 aa7.79□□□□□ -1.16
SNRNP40-202ENST00000373720 PCDH15Q96QU1 1955 aa7.79□□□□□ -1.16
SNRNP40-202ENST00000373720 SCN2AQ99250 2005 aa7.78□□□□□ -1.16
SNRNP40-202ENST00000373720 ARID1BQ8NFD5 2236 aaPredicted RBP7.78□□□□□ -1.16
SNRNP40-202ENST00000373720 CCDC187A0A096LP49 1063 aa7.78□□□□□ -1.16
SNRNP40-202ENST00000373720 IGHV3-20A0A0C4DH32 117 aa7.78□□□□□ -1.16
SNRNP40-202ENST00000373720 ANKRD20A5PA0PJZ0 165 aa7.78□□□□□ -1.16
SNRNP40-202ENST00000373720 TVP23AA6NH52 213 aa7.78□□□□□ -1.16
SNRNP40-202ENST00000373720 SNRPGP15A8MWD9 76 aa7.78□□□□□ -1.16
SNRNP40-202ENST00000373720 LRP3O75074 770 aa7.78□□□□□ -1.16
SNRNP40-202ENST00000373720 SRSF10O75494 262 aaKnown RBP7.78□□□□□ -1.16
SNRNP40-202ENST00000373720 STK17BO94768 372 aa7.78□□□□□ -1.16
SNRNP40-202ENST00000373720 GLSO94925 669 aaPredicted RBP7.78□□□□□ -1.16
SNRNP40-202ENST00000373720 RPP14O95059 124 aaKnown RBP7.78□□□□□ -1.16
SNRNP40-202ENST00000373720 C1QBP02746 253 aa7.78□□□□□ -1.16
SNRNP40-202ENST00000373720 TCRBP04435 133 aa7.78□□□□□ -1.16
SNRNP40-202ENST00000373720 IL5P05113 134 aa7.78□□□□□ -1.16
SNRNP40-202ENST00000373720 SP9P0CG40 484 aa7.78□□□□□ -1.16
SNRNP40-202ENST00000373720 GABRA1P14867 456 aa7.78□□□□□ -1.16
SNRNP40-202ENST00000373720 ARSBP15848 533 aa7.78□□□□□ -1.16
SNRNP40-202ENST00000373720 PSMB1P20618 241 aaKnown RBP7.78□□□□□ -1.16
SNRNP40-202ENST00000373720 STOMP27105 288 aa7.78□□□□□ -1.16
SNRNP40-202ENST00000373720 HTR2CP28335 458 aa7.78□□□□□ -1.16
SNRNP40-202ENST00000373720 PSMB10P40306 273 aa7.78□□□□□ -1.16
SNRNP40-202ENST00000373720 CASRP41180 1078 aa7.78□□□□□ -1.16
SNRNP40-202ENST00000373720 DNASE1L1P49184 302 aa7.78□□□□□ -1.16
SNRNP40-202ENST00000373720 ZNF84P51523 738 aa7.78□□□□□ -1.16
SNRNP40-202ENST00000373720 OR10A3P58181 314 aa7.78□□□□□ -1.16
SNRNP40-202ENST00000373720 PSMA6P60900 246 aaKnown RBP7.78□□□□□ -1.16
SNRNP40-202ENST00000373720 GABREP78334 506 aa7.78□□□□□ -1.16
SNRNP40-202ENST00000373720 GALK2Q01415 458 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms