RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 ZNF468Q5VIY5 522 aaPredicted RBP9.59□□□□□ -0.87
TPM3-212ENST00000368533 Q6ZTK2 550 aa9.59□□□□□ -0.87
TPM3-212ENST00000368533 OR11G2Q8NGC1 345 aa9.59□□□□□ -0.87
TPM3-212ENST00000368533 CACNG6Q9BXT2 260 aa9.59□□□□□ -0.87
TPM3-212ENST00000368533 STRADBQ9C0K7 418 aa9.59□□□□□ -0.87
TPM3-212ENST00000368533 ACTR6Q9GZN1 396 aa9.59□□□□□ -0.87
TPM3-212ENST00000368533 TINAGQ9UJW2 476 aa9.59□□□□□ -0.87
TPM3-212ENST00000368533 NOSIPQ9Y314 301 aaKnown RBP9.59□□□□□ -0.87
TPM3-212ENST00000368533 CEP295Q9C0D2 2601 aa9.59□□□□□ -0.87
TPM3-212ENST00000368533 A0A087WUJ7 227 aa9.59□□□□□ -0.87
TPM3-212ENST00000368533 C7orf66A4D0T2 115 aa9.59□□□□□ -0.87
TPM3-212ENST00000368533 J3QRE1 110 aa9.59□□□□□ -0.87
TPM3-212ENST00000368533 PLPP2O43688 288 aa9.59□□□□□ -0.87
TPM3-212ENST00000368533 TNFSF15O95150 251 aa9.59□□□□□ -0.87
TPM3-212ENST00000368533 APOC1P02654 83 aa9.59□□□□□ -0.87
TPM3-212ENST00000368533 FABP1P07148 127 aa9.59□□□□□ -0.87
TPM3-212ENST00000368533 CXCR1P25024 350 aa9.59□□□□□ -0.87
TPM3-212ENST00000368533 RPS27P42677 84 aaKnown RBP9.59□□□□□ -0.87
TPM3-212ENST00000368533 LTBQ06643 244 aa9.59□□□□□ -0.87
TPM3-212ENST00000368533 SFRP4Q6FHJ7 346 aaPredicted RBP9.59□□□□□ -0.87
TPM3-212ENST00000368533 WBP2NLQ6ICG8 309 aa9.59□□□□□ -0.87
TPM3-212ENST00000368533 DBX2Q6ZNG2 339 aa9.59□□□□□ -0.87
TPM3-212ENST00000368533 PRSS45Q7RTY3 260 aa9.59□□□□□ -0.87
TPM3-212ENST00000368533 ZNF441Q8N8Z8 693 aa9.59□□□□□ -0.87
TPM3-212ENST00000368533 OR4D10Q8NGI6 311 aa9.59□□□□□ -0.87
TPM3-212ENST00000368533 OR14A2Q96R54 314 aa9.59□□□□□ -0.87
TPM3-212ENST00000368533 RASL10BQ96S79 203 aa9.59□□□□□ -0.87
TPM3-212ENST00000368533 CNN2Q99439 309 aaKnown RBP9.59□□□□□ -0.87
TPM3-212ENST00000368533 NSG1A0A0A6YYJ2 146 aa9.58□□□□□ -0.88
TPM3-212ENST00000368533 TTLL8A6PVC2 850 aa9.58□□□□□ -0.88
TPM3-212ENST00000368533 L7N2F9 121 aa9.58□□□□□ -0.88
TPM3-212ENST00000368533 NDUFB2O95178 105 aa9.58□□□□□ -0.88
TPM3-212ENST00000368533 GP1BAP07359 652 aa9.58□□□□□ -0.88
TPM3-212ENST00000368533 BTG1P62324 171 aa9.58□□□□□ -0.88
TPM3-212ENST00000368533 ACTC1P68032 377 aa9.58□□□□□ -0.88
TPM3-212ENST00000368533 ACTA1P68133 377 aa9.58□□□□□ -0.88
TPM3-212ENST00000368533 TCF15Q12870 199 aa9.58□□□□□ -0.88
TPM3-212ENST00000368533 CHAF1BQ13112 559 aa9.58□□□□□ -0.88
TPM3-212ENST00000368533 IKZF1Q13422 519 aa9.58□□□□□ -0.88
TPM3-212ENST00000368533 TOMM20Q15388 145 aa9.58□□□□□ -0.88
TPM3-212ENST00000368533 FAM74A1Q5RGS3 127 aa9.58□□□□□ -0.88
TPM3-212ENST00000368533 RBMS3Q6XE24 437 aaKnown RBP9.58□□□□□ -0.88
TPM3-212ENST00000368533 GCDHQ92947 438 aaPredicted RBP9.58□□□□□ -0.88
TPM3-212ENST00000368533 TAAR8Q969N4 342 aa9.58□□□□□ -0.88
TPM3-212ENST00000368533 MRPS24Q96EL2 167 aaKnown RBP9.58□□□□□ -0.88
TPM3-212ENST00000368533 SLC25A18Q9H1K4 315 aa9.58□□□□□ -0.88
TPM3-212ENST00000368533 INPP5EQ9NRR6 644 aa9.58□□□□□ -0.88
TPM3-212ENST00000368533 KIF25Q9UIL4 384 aa9.58□□□□□ -0.88
TPM3-212ENST00000368533 ICAM5Q9UMF0 924 aa9.58□□□□□ -0.88
TPM3-212ENST00000368533 SVILO95425 2214 aa9.58□□□□□ -0.88
TPM3-212ENST00000368533 ATMQ13315 3056 aa9.58□□□□□ -0.88
TPM3-212ENST00000368533 MEIKINA0A087WXM9 373 aa9.58□□□□□ -0.88
TPM3-212ENST00000368533 SELENOFO60613 162 aa9.58□□□□□ -0.88
TPM3-212ENST00000368533 FMO6PO60774 539 aa9.58□□□□□ -0.88
TPM3-212ENST00000368533 ZFAND5O76080 213 aa9.58□□□□□ -0.88
TPM3-212ENST00000368533 GPANK1O95872 356 aa9.58□□□□□ -0.88
TPM3-212ENST00000368533 COX6A1P12074 109 aa9.58□□□□□ -0.88
TPM3-212ENST00000368533 NPR2P20594 1047 aa9.58□□□□□ -0.88
TPM3-212ENST00000368533 MAGEB1P43366 347 aa9.58□□□□□ -0.88
TPM3-212ENST00000368533 LGALS3BPQ08380 585 aa9.58□□□□□ -0.88
TPM3-212ENST00000368533 SRSF6Q13247 344 aaKnown RBP9.58□□□□□ -0.88
TPM3-212ENST00000368533 BIKQ13323 160 aa9.58□□□□□ -0.88
TPM3-212ENST00000368533 TRA2AQ13595 282 aaKnown RBP eCLIP9.58□□□□□ -0.884e-13■■■■□ 25.8
TPM3-212ENST00000368533 CD276Q5ZPR3 534 aa9.58□□□□□ -0.88
TPM3-212ENST00000368533 CBLN2Q8IUK8 224 aa9.58□□□□□ -0.88
TPM3-212ENST00000368533 SLC35F2Q8IXU6 374 aa9.58□□□□□ -0.88
TPM3-212ENST00000368533 ZNRF4Q8WWF5 429 aa9.58□□□□□ -0.88
TPM3-212ENST00000368533 Q96M85 177 aa9.58□□□□□ -0.88
TPM3-212ENST00000368533 C19orf25Q9UFG5 118 aaPredicted RBP9.58□□□□□ -0.88
TPM3-212ENST00000368533 IGHV1-45A0A0A0MS14 117 aa9.58□□□□□ -0.88
TPM3-212ENST00000368533 ALG1L2C9J202 215 aa9.58□□□□□ -0.88
TPM3-212ENST00000368533 ARPC5O15511 151 aa9.58□□□□□ -0.88
TPM3-212ENST00000368533 FADS1O60427 444 aa9.58□□□□□ -0.88
TPM3-212ENST00000368533 TFP02787 698 aa9.58□□□□□ -0.88
TPM3-212ENST00000368533 HOXB1P14653 301 aaPredicted RBP9.58□□□□□ -0.88
TPM3-212ENST00000368533 PTBP1P26599 531 aaKnown RBP eCLIP9.58□□□□□ -0.882e-9■■■■■ 36.6
TPM3-212ENST00000368533 RBMS1P29558 406 aaKnown RBP9.58□□□□□ -0.88
TPM3-212ENST00000368533 DCAF7P61962 342 aa9.58□□□□□ -0.88
TPM3-212ENST00000368533 DGCR2P98153 550 aa9.58□□□□□ -0.88
TPM3-212ENST00000368533 TRAM1Q15629 374 aa9.58□□□□□ -0.88
TPM3-212ENST00000368533 SWI5Q1ZZU3 235 aa9.58□□□□□ -0.88
TPM3-212ENST00000368533 GSG1Q2KHT4 349 aa9.58□□□□□ -0.88
TPM3-212ENST00000368533 HES5Q5TA89 166 aa9.58□□□□□ -0.88
TPM3-212ENST00000368533 TMEM205Q6UW68 189 aa9.58□□□□□ -0.88
TPM3-212ENST00000368533 C6orf15Q6UXA7 325 aaPredicted RBP9.58□□□□□ -0.88
TPM3-212ENST00000368533 MDGA2Q7Z553 956 aa9.58□□□□□ -0.88
TPM3-212ENST00000368533 ATG4DQ86TL0 474 aaPredicted RBP9.58□□□□□ -0.88
TPM3-212ENST00000368533 TPRA1Q86W33 373 aa9.58□□□□□ -0.88
TPM3-212ENST00000368533 SIAH3Q8IW03 269 aa9.58□□□□□ -0.88
TPM3-212ENST00000368533 SERPINA12Q8IW75 414 aa9.58□□□□□ -0.88
TPM3-212ENST00000368533 OR2Y1Q8NGV0 311 aa9.58□□□□□ -0.88
TPM3-212ENST00000368533 LOXL4Q96JB6 756 aa9.58□□□□□ -0.88
TPM3-212ENST00000368533 ARL5BQ96KC2 179 aa9.58□□□□□ -0.88
TPM3-212ENST00000368533 MFRPQ9BY79 579 aa9.58□□□□□ -0.88
TPM3-212ENST00000368533 DPAGT1Q9H3H5 408 aa9.58□□□□□ -0.88
TPM3-212ENST00000368533 CA10Q9NS85 328 aa9.58□□□□□ -0.88
TPM3-212ENST00000368533 IL17BQ9UHF5 180 aa9.58□□□□□ -0.88
TPM3-212ENST00000368533 SCP2D1Q9UJQ7 156 aa9.58□□□□□ -0.88
TPM3-212ENST00000368533 ACOD1A6NK06 481 aa9.57□□□□□ -0.88
TPM3-212ENST00000368533 H0YC42 278 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms