RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 GLSO94925 669 aaPredicted RBP5.58□□□□□ -1.52
VPS13B-203ENST00000358544 LMAN2Q12907 356 aa5.58□□□□□ -1.52
VPS13B-203ENST00000358544 TMEM201Q5SNT2 666 aa5.58□□□□□ -1.52
VPS13B-203ENST00000358544 ZNF385CQ66K41 422 aaPredicted RBP5.58□□□□□ -1.52
VPS13B-203ENST00000358544 VRK2Q86Y07 508 aa5.58□□□□□ -1.52
VPS13B-203ENST00000358544 OR6K3Q8NGY3 331 aa5.58□□□□□ -1.52
VPS13B-203ENST00000358544 CCDC74AQ96AQ1 378 aa5.58□□□□□ -1.52
VPS13B-203ENST00000358544 FGF20Q9NP95 211 aaPredicted RBP5.58□□□□□ -1.52
VPS13B-203ENST00000358544 C2orf42Q9NWW7 574 aa5.58□□□□□ -1.52
VPS13B-203ENST00000358544 UPK1AO00322 258 aa5.58□□□□□ -1.52
VPS13B-203ENST00000358544 APODP05090 189 aa5.58□□□□□ -1.52
VPS13B-203ENST00000358544 NMBP08949 121 aa5.58□□□□□ -1.52
VPS13B-203ENST00000358544 GATMP50440 423 aa5.58□□□□□ -1.52
VPS13B-203ENST00000358544 MVDP53602 400 aa5.58□□□□□ -1.52
VPS13B-203ENST00000358544 GPR18Q14330 331 aa5.58□□□□□ -1.52
VPS13B-203ENST00000358544 IHHQ14623 411 aa5.58□□□□□ -1.52
VPS13B-203ENST00000358544 AARDQ4LEZ3 155 aa5.58□□□□□ -1.52
VPS13B-203ENST00000358544 PHLDA2Q53GA4 152 aa5.58□□□□□ -1.52
VPS13B-203ENST00000358544 OTUD1Q5VV17 481 aaPredicted RBP5.58□□□□□ -1.52
VPS13B-203ENST00000358544 NSUN5P2Q63ZY6 315 aa5.58□□□□□ -1.52
VPS13B-203ENST00000358544 OR2A2Q6IF42 318 aa5.58□□□□□ -1.52
VPS13B-203ENST00000358544 MSRB3Q8IXL7 192 aa5.58□□□□□ -1.52
VPS13B-203ENST00000358544 DYRK2Q92630 601 aa5.58□□□□□ -1.52
VPS13B-203ENST00000358544 OR1F2PQ96R84 312 aa5.58□□□□□ -1.52
VPS13B-203ENST00000358544 TNFRSF13CQ96RJ3 184 aa5.58□□□□□ -1.52
VPS13B-203ENST00000358544 IFITM5A6NNB3 132 aa5.58□□□□□ -1.52
VPS13B-203ENST00000358544 TAPBPO15533 448 aa5.58□□□□□ -1.52
VPS13B-203ENST00000358544 CHRM4P08173 479 aa5.58□□□□□ -1.52
VPS13B-203ENST00000358544 ZNF888P0CJ79 500 aaPredicted RBP5.58□□□□□ -1.52
VPS13B-203ENST00000358544 CSF2RAP15509 400 aa5.58□□□□□ -1.52
VPS13B-203ENST00000358544 ABOP16442 354 aa5.58□□□□□ -1.52
VPS13B-203ENST00000358544 PGCP20142 388 aa5.58□□□□□ -1.52
VPS13B-203ENST00000358544 SUOXP51687 545 aa5.58□□□□□ -1.52
VPS13B-203ENST00000358544 TFAP2EQ6VUC0 442 aa5.58□□□□□ -1.52
VPS13B-203ENST00000358544 HMGCLL1Q8TB92 370 aa5.58□□□□□ -1.52
VPS13B-203ENST00000358544 ESRP2Q9H6T0 727 aaKnown RBP5.58□□□□□ -1.52
VPS13B-203ENST00000358544 LPAR3Q9UBY5 353 aa5.58□□□□□ -1.52
VPS13B-203ENST00000358544 ASB1Q9Y576 335 aa5.58□□□□□ -1.52
VPS13B-203ENST00000358544 K7ERQ8 282 aa5.58□□□□□ -1.52
VPS13B-203ENST00000358544 PYCR3Q53H96 274 aa5.58□□□□□ -1.52
VPS13B-203ENST00000358544 ATPAF1Q5TC12 328 aaPredicted RBP5.58□□□□□ -1.52
VPS13B-203ENST00000358544 ZNF808Q8N4W9 903 aaPredicted RBP5.58□□□□□ -1.52
VPS13B-203ENST00000358544 ZNF160Q9HCG1 818 aa5.58□□□□□ -1.52
VPS13B-203ENST00000358544 A0A1B0GWA3 101 aa5.58□□□□□ -1.52
VPS13B-203ENST00000358544 ECI1P42126 302 aa5.58□□□□□ -1.52
VPS13B-203ENST00000358544 CTSCP53634 463 aa5.58□□□□□ -1.52
VPS13B-203ENST00000358544 EXOSC7Q15024 291 aaKnown RBP5.58□□□□□ -1.52
VPS13B-203ENST00000358544 RPUSD4Q96CM3 377 aaKnown RBP5.58□□□□□ -1.52
VPS13B-203ENST00000358544 ZNF814B7Z6K7 855 aa5.58□□□□□ -1.52
VPS13B-203ENST00000358544 RAC2P15153 192 aa5.58□□□□□ -1.52
VPS13B-203ENST00000358544 PDXPQ96GD0 296 aa5.58□□□□□ -1.52
VPS13B-203ENST00000358544 LYSMD1Q96S90 227 aa5.58□□□□□ -1.52
VPS13B-203ENST00000358544 PRSS16Q9NQE7 514 aa5.58□□□□□ -1.52
VPS13B-203ENST00000358544 SLC5A10A0PJK1 596 aa5.58□□□□□ -1.52
VPS13B-203ENST00000358544 XRCC2O43543 280 aa5.58□□□□□ -1.52
VPS13B-203ENST00000358544 BCKDHBP21953 392 aa5.58□□□□□ -1.52
VPS13B-203ENST00000358544 HTRA3P83110 453 aa5.58□□□□□ -1.52
VPS13B-203ENST00000358544 PKDCCQ504Y2 493 aa5.58□□□□□ -1.52
VPS13B-203ENST00000358544 MARCH8Q5T0T0 291 aa5.58□□□□□ -1.52
VPS13B-203ENST00000358544 FAM160A2Q8N612 972 aaPredicted RBP5.58□□□□□ -1.52
VPS13B-203ENST00000358544 FBXO4Q9UKT5 387 aa5.58□□□□□ -1.52
VPS13B-203ENST00000358544 DSCAML1Q8TD84 2053 aa5.58□□□□□ -1.52
VPS13B-203ENST00000358544 ZC3H12DA2A288 527 aaKnown RBP5.58□□□□□ -1.52
VPS13B-203ENST00000358544 ATP1B3P54709 279 aa5.58□□□□□ -1.52
VPS13B-203ENST00000358544 ZNF626Q68DY1 528 aa5.58□□□□□ -1.52
VPS13B-203ENST00000358544 ZNF66Q6ZN08 573 aa5.58□□□□□ -1.52
VPS13B-203ENST00000358544 ADPRHL1Q8NDY3 354 aa5.58□□□□□ -1.52
VPS13B-203ENST00000358544 SGCZQ96LD1 299 aa5.58□□□□□ -1.52
VPS13B-203ENST00000358544 FKBP11Q9NYL4 201 aa5.58□□□□□ -1.52
VPS13B-203ENST00000358544 UBR1Q8IWV7 1749 aa5.58□□□□□ -1.52
VPS13B-203ENST00000358544 NALCNQ8IZF0 1738 aa5.58□□□□□ -1.52
VPS13B-203ENST00000358544 LOC107986453A0A1B0GWG9 222 aa5.58□□□□□ -1.52
VPS13B-203ENST00000358544 CDRT15L2A8MXV6 281 aa5.58□□□□□ -1.52
VPS13B-203ENST00000358544 CD3DP04234 171 aa5.58□□□□□ -1.52
VPS13B-203ENST00000358544 AADACP22760 399 aa5.58□□□□□ -1.52
VPS13B-203ENST00000358544 NOVA1P51513 510 aaKnown RBP5.58□□□□□ -1.52
VPS13B-203ENST00000358544 ZNF157P51786 506 aaPredicted RBP5.58□□□□□ -1.52
VPS13B-203ENST00000358544 ZNF805Q5CZA5 627 aa5.58□□□□□ -1.52
VPS13B-203ENST00000358544 ZSCAN4Q8NAM6 433 aaPredicted RBP5.58□□□□□ -1.52
VPS13B-203ENST00000358544 ULBP3Q9BZM4 244 aa5.58□□□□□ -1.52
VPS13B-203ENST00000358544 METTL7AQ9H8H3 244 aa5.58□□□□□ -1.52
VPS13B-203ENST00000358544 KCNIP1Q9NZI2 227 aa5.58□□□□□ -1.52
VPS13B-203ENST00000358544 FOXJ3Q9UPW0 622 aa5.58□□□□□ -1.52
VPS13B-203ENST00000358544 FASLGP48023 281 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 GLIPR1L1Q6UWM5 242 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 EDDM13A0A1B0GTR0 161 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 ZNF727A8MUV8 499 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 EDIL3O43854 480 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 CST4P01036 141 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 RPS18P62269 152 aaKnown RBP5.57□□□□□ -1.52
VPS13B-203ENST00000358544 JAG1P78504 1218 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 MALLQ13021 153 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 LTB4RQ15722 352 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 RNLSQ5VYX0 342 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 CPXM2Q8N436 756 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 ZNF511Q8NB15 262 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 RCBTB1Q8NDN9 531 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 SEC11CQ9BY50 192 aa5.57□□□□□ -1.52
VPS13B-203ENST00000358544 NPIPB15A6NHN6 443 aaPredicted RBP5.57□□□□□ -1.52
VPS13B-203ENST00000358544 EDN1P05305 212 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms