RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 MRPL22Q9NWU5 206 aaKnown RBP13.33□□□□□ -0.28
TPM1-206ENST00000358278 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.33□□□□□ -0.28
TPM1-206ENST00000358278 ARPC4-TTLL3A0A0A6YYG9 625 aa13.32□□□□□ -0.28
TPM1-206ENST00000358278 CCDC182A6NF36 153 aa13.32□□□□□ -0.28
TPM1-206ENST00000358278 C12orf71A8MTZ7 269 aa13.32□□□□□ -0.28
TPM1-206ENST00000358278 CST2P09228 141 aa13.32□□□□□ -0.28
TPM1-206ENST00000358278 HTR1FP30939 366 aa13.32□□□□□ -0.28
TPM1-206ENST00000358278 ISL1P61371 349 aa13.32□□□□□ -0.28
TPM1-206ENST00000358278 PIGFQ07326 219 aa13.32□□□□□ -0.28
TPM1-206ENST00000358278 KCNMB1Q16558 191 aa13.32□□□□□ -0.28
TPM1-206ENST00000358278 GSG1Q2KHT4 349 aa13.32□□□□□ -0.28
TPM1-206ENST00000358278 SSX8Q7RTT4 187 aa13.32□□□□□ -0.28
TPM1-206ENST00000358278 THAP5Q7Z6K1 395 aa13.32□□□□□ -0.28
TPM1-206ENST00000358278 DPPA2Q7Z7J5 298 aa13.32□□□□□ -0.28
TPM1-206ENST00000358278 WDR31Q8NA23 367 aa13.32□□□□□ -0.28
TPM1-206ENST00000358278 OR6N2Q8NGY6 317 aa13.32□□□□□ -0.28
TPM1-206ENST00000358278 LINC01560Q8TB33 94 aa13.32□□□□□ -0.28
TPM1-206ENST00000358278 APH1BQ8WW43 257 aa13.32□□□□□ -0.28
TPM1-206ENST00000358278 FBXO17Q96EF6 278 aa13.32□□□□□ -0.28
TPM1-206ENST00000358278 WFIKKN1Q96NZ8 548 aa13.32□□□□□ -0.28
TPM1-206ENST00000358278 INTS14Q96SY0 518 aa13.32□□□□□ -0.28
TPM1-206ENST00000358278 ANKRD60Q9BZ19 345 aa13.32□□□□□ -0.28
TPM1-206ENST00000358278 WDR76Q9H967 626 aa13.32□□□□□ -0.28
TPM1-206ENST00000358278 ZNF224Q9NZL3 707 aa13.32□□□□□ -0.28
TPM1-206ENST00000358278 ASH2LQ9UBL3 628 aa13.32□□□□□ -0.28
TPM1-206ENST00000358278 WARS2Q9UGM6 360 aaKnown RBP13.32□□□□□ -0.28
TPM1-206ENST00000358278 DCHS2Q6V1P9 2916 aa13.32□□□□□ -0.28
TPM1-206ENST00000358278 ZNF503-AS2A6NEH8 195 aa13.31□□□□□ -0.28
TPM1-206ENST00000358278 TMCC2O75069 709 aa13.31□□□□□ -0.28
TPM1-206ENST00000358278 RAB36O95755 333 aa13.31□□□□□ -0.28
TPM1-206ENST00000358278 CLDN1O95832 211 aa13.31□□□□□ -0.28
TPM1-206ENST00000358278 MRPL3P09001 348 aaKnown RBP13.31□□□□□ -0.28
TPM1-206ENST00000358278 SPARCP09486 303 aa13.31□□□□□ -0.28
TPM1-206ENST00000358278 PATE4P0C8F1 98 aa13.31□□□□□ -0.28
TPM1-206ENST00000358278 NAA10P41227 235 aaPredicted RBP13.31□□□□□ -0.28
TPM1-206ENST00000358278 ENTPD1P49961 510 aa13.31□□□□□ -0.28
TPM1-206ENST00000358278 NUDT6P53370 316 aa13.31□□□□□ -0.28
TPM1-206ENST00000358278 PCBD1P61457 104 aa13.31□□□□□ -0.28
TPM1-206ENST00000358278 AQP6Q13520 282 aa13.31□□□□□ -0.28
TPM1-206ENST00000358278 ENDOGQ14249 297 aaKnown RBP13.31□□□□□ -0.28
TPM1-206ENST00000358278 TMEM53Q6P2H8 277 aa13.31□□□□□ -0.28
TPM1-206ENST00000358278 WFDC8Q8IUA0 241 aa13.31□□□□□ -0.28
TPM1-206ENST00000358278 CNBD2Q96M20 576 aa13.31□□□□□ -0.28
TPM1-206ENST00000358278 KCNG2Q9UJ96 466 aa13.31□□□□□ -0.28
TPM1-206ENST00000358278 SLC25A15Q9Y619 301 aa13.31□□□□□ -0.28
TPM1-206ENST00000358278 ABCA4P78363 2273 aa13.31□□□□□ -0.28
TPM1-206ENST00000358278 CENPEQ02224 2701 aa13.31□□□□□ -0.28
TPM1-206ENST00000358278 SELENOFO60613 162 aa13.3□□□□□ -0.28
TPM1-206ENST00000358278 WBP4O75554 376 aaKnown RBP13.3□□□□□ -0.28
TPM1-206ENST00000358278 MYF6P23409 242 aa13.3□□□□□ -0.28
TPM1-206ENST00000358278 ATP6V1E1P36543 226 aa13.3□□□□□ -0.28
TPM1-206ENST00000358278 ARR3P36575 388 aa13.3□□□□□ -0.28
TPM1-206ENST00000358278 KIR2DL3P43628 341 aa13.3□□□□□ -0.28
TPM1-206ENST00000358278 MTNR1AP48039 350 aa13.3□□□□□ -0.28
TPM1-206ENST00000358278 RAB1AP62820 205 aa13.3□□□□□ -0.28
TPM1-206ENST00000358278 GGTLC2Q14390 218 aa13.3□□□□□ -0.28
TPM1-206ENST00000358278 C1QTNF12Q5T7M4 302 aa13.3□□□□□ -0.28
TPM1-206ENST00000358278 MEX3BQ6ZN04 569 aaKnown RBP13.3□□□□□ -0.28
TPM1-206ENST00000358278 C22orf34Q6ZV56 151 aa13.3□□□□□ -0.28
TPM1-206ENST00000358278 MDP1Q86V88 176 aa13.3□□□□□ -0.28
TPM1-206ENST00000358278 LINC00346Q8IVM7 164 aa13.3□□□□□ -0.28
TPM1-206ENST00000358278 OR51G2Q8NGK0 314 aa13.3□□□□□ -0.28
TPM1-206ENST00000358278 OR2AJ1Q8NGZ0 328 aa13.3□□□□□ -0.28
TPM1-206ENST00000358278 CNN2Q99439 309 aaKnown RBP13.3□□□□□ -0.28
TPM1-206ENST00000358278 MOV10Q9HCE1 1003 aaKnown RBP13.3□□□□□ -0.28
TPM1-206ENST00000358278 LHFPL6Q9Y693 200 aa13.3□□□□□ -0.28
TPM1-206ENST00000358278 PLCE1Q9P212 2302 aa13.3□□□□□ -0.28
TPM1-206ENST00000358278 ZNF593O00488 134 aaPredicted RBP13.3□□□□□ -0.28
TPM1-206ENST00000358278 THBDP07204 575 aa13.3□□□□□ -0.28
TPM1-206ENST00000358278 ZNF32P17041 273 aa13.3□□□□□ -0.28
TPM1-206ENST00000358278 IGFBP2P18065 325 aa13.3□□□□□ -0.28
TPM1-206ENST00000358278 RPS27P42677 84 aaKnown RBP13.3□□□□□ -0.28
TPM1-206ENST00000358278 SCRN3Q0VDG4 424 aa13.3□□□□□ -0.28
TPM1-206ENST00000358278 POU4F2Q12837 409 aa13.3□□□□□ -0.28
TPM1-206ENST00000358278 TMED1Q13445 227 aa13.3□□□□□ -0.28
TPM1-206ENST00000358278 KRT80Q6KB66 452 aa13.3□□□□□ -0.28
TPM1-206ENST00000358278 CORO6Q6QEF8 472 aa13.3□□□□□ -0.28
TPM1-206ENST00000358278 SYT9Q86SS6 491 aa13.3□□□□□ -0.28
TPM1-206ENST00000358278 DMRTC2Q8IXT2 367 aaPredicted RBP13.3□□□□□ -0.28
TPM1-206ENST00000358278 TIGD4Q8IY51 512 aa13.3□□□□□ -0.28
TPM1-206ENST00000358278 FGFBP3Q8TAT2 258 aa13.3□□□□□ -0.28
TPM1-206ENST00000358278 DACH2Q96NX9 599 aa13.3□□□□□ -0.28
TPM1-206ENST00000358278 WACQ9BTA9 647 aa13.3□□□□□ -0.28
TPM1-206ENST00000358278 C1QTNF6Q9BXI9 259 aa13.3□□□□□ -0.28
TPM1-206ENST00000358278 MARCH7Q9H992 704 aa13.3□□□□□ -0.28
TPM1-206ENST00000358278 NGBQ9NPG2 151 aa13.3□□□□□ -0.28
TPM1-206ENST00000358278 HAO2Q9NYQ3 351 aa13.3□□□□□ -0.28
TPM1-206ENST00000358278 CASKO14936 926 aa13.29□□□□□ -0.28
TPM1-206ENST00000358278 MMP7P09237 267 aaPredicted RBP13.29□□□□□ -0.28
TPM1-206ENST00000358278 PAX7P23759 505 aa13.29□□□□□ -0.28
TPM1-206ENST00000358278 ZNF83P51522 516 aa13.29□□□□□ -0.28
TPM1-206ENST00000358278 ZNF91Q05481 1191 aa13.29□□□□□ -0.28
TPM1-206ENST00000358278 CDK5R2Q13319 367 aa13.29□□□□□ -0.28
TPM1-206ENST00000358278 SMN1Q16637 294 aaKnown RBP13.29□□□□□ -0.28
TPM1-206ENST00000358278 DPY19L4Q7Z388 723 aa13.29□□□□□ -0.28
TPM1-206ENST00000358278 GJC3Q8NFK1 279 aa13.29□□□□□ -0.28
TPM1-206ENST00000358278 RNFT2Q96EX2 444 aa13.29□□□□□ -0.28
TPM1-206ENST00000358278 ADGRL4Q9HBW9 690 aa13.29□□□□□ -0.28
TPM1-206ENST00000358278 NOX3Q9HBY0 568 aa13.29□□□□□ -0.28
TPM1-206ENST00000358278 AMBNQ9NP70 447 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms