RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 DAPP1Q9UN19 280 aa9.62□□□□□ -0.87
CAPN3-205ENST00000357568 DTX4Q9Y2E6 619 aa9.62□□□□□ -0.87
CAPN3-205ENST00000357568 A0A0B4J2A0 478 aa9.62□□□□□ -0.87
CAPN3-205ENST00000357568 C1orf196B1AJZ1 125 aa9.62□□□□□ -0.87
CAPN3-205ENST00000357568 FADS1O60427 444 aa9.62□□□□□ -0.87
CAPN3-205ENST00000357568 HLA-AP01891 365 aaKnown RBP9.62□□□□□ -0.87
CAPN3-205ENST00000357568 SLC35G6P0C7Q6 338 aa9.62□□□□□ -0.87
CAPN3-205ENST00000357568 ZNF888P0CJ79 500 aaPredicted RBP9.62□□□□□ -0.87
CAPN3-205ENST00000357568 NTSR1P30989 418 aa9.62□□□□□ -0.87
CAPN3-205ENST00000357568 NPBWR1P48145 328 aa9.62□□□□□ -0.87
CAPN3-205ENST00000357568 SOX2P48431 317 aa9.62□□□□□ -0.87
CAPN3-205ENST00000357568 ARRB1P49407 418 aaPredicted RBP9.62□□□□□ -0.87
CAPN3-205ENST00000357568 CAV2P51636 162 aa9.62□□□□□ -0.87
CAPN3-205ENST00000357568 ATP1B3P54709 279 aa9.62□□□□□ -0.87
CAPN3-205ENST00000357568 TAS2R31P59538 309 aa9.62□□□□□ -0.87
CAPN3-205ENST00000357568 DMWDQ09019 674 aa9.62□□□□□ -0.87
CAPN3-205ENST00000357568 MESP2Q0VG99 397 aa9.62□□□□□ -0.87
CAPN3-205ENST00000357568 ELOCQ15369 112 aa9.62□□□□□ -0.87
CAPN3-205ENST00000357568 TRMT12Q53H54 448 aaKnown RBP9.62□□□□□ -0.87
CAPN3-205ENST00000357568 JAZF1Q86VZ6 243 aa9.62□□□□□ -0.87
CAPN3-205ENST00000357568 ZNF440Q8IYI8 595 aa9.62□□□□□ -0.87
CAPN3-205ENST00000357568 BPIFB2Q8N4F0 458 aa9.62□□□□□ -0.87
CAPN3-205ENST00000357568 PAQR4Q8N4S7 273 aaPredicted RBP9.62□□□□□ -0.87
CAPN3-205ENST00000357568 ZNF676Q8N7Q3 588 aa9.62□□□□□ -0.87
CAPN3-205ENST00000357568 OR4A4PQ8NGN8 299 aa9.62□□□□□ -0.87
CAPN3-205ENST00000357568 CTHRC1Q96CG8 243 aa9.62□□□□□ -0.87
CAPN3-205ENST00000357568 SMIM8Q96KF7 97 aa9.62□□□□□ -0.87
CAPN3-205ENST00000357568 CHRDQ9H2X0 955 aa9.62□□□□□ -0.87
CAPN3-205ENST00000357568 XKR8Q9H6D3 395 aa9.62□□□□□ -0.87
CAPN3-205ENST00000357568 WDR76Q9H967 626 aa9.62□□□□□ -0.87
CAPN3-205ENST00000357568 ADAP2Q9NPF8 381 aa9.62□□□□□ -0.87
CAPN3-205ENST00000357568 TM7SF3Q9NS93 570 aa9.62□□□□□ -0.87
CAPN3-205ENST00000357568 SHPKQ9UHJ6 478 aa9.62□□□□□ -0.87
CAPN3-205ENST00000357568 HIF3AQ9Y2N7 669 aa9.62□□□□□ -0.87
CAPN3-205ENST00000357568 MEGF11A6BM72 1044 aa9.61□□□□□ -0.87
CAPN3-205ENST00000357568 DBX1A6NMT0 343 aa9.61□□□□□ -0.87
CAPN3-205ENST00000357568 MAS1P04201 325 aa9.61□□□□□ -0.87
CAPN3-205ENST00000357568 CRHP06850 196 aa9.61□□□□□ -0.87
CAPN3-205ENST00000357568 FAM157CP0CG43 387 aa9.61□□□□□ -0.87
CAPN3-205ENST00000357568 SELLP14151 372 aa9.61□□□□□ -0.87
CAPN3-205ENST00000357568 RAB6AP20340 208 aa9.61□□□□□ -0.87
CAPN3-205ENST00000357568 PSMB6P28072 239 aa9.61□□□□□ -0.87
CAPN3-205ENST00000357568 MAGEB1P43366 347 aa9.61□□□□□ -0.87
CAPN3-205ENST00000357568 METAP1P53582 386 aa9.61□□□□□ -0.87
CAPN3-205ENST00000357568 AIMP2Q13155 320 aaKnown RBP9.61□□□□□ -0.87
CAPN3-205ENST00000357568 Q3ZCU0 254 aa9.61□□□□□ -0.87
CAPN3-205ENST00000357568 ARHGAP40Q5TG30 622 aa9.61□□□□□ -0.87
CAPN3-205ENST00000357568 EIF5AL1Q6IS14 154 aaKnown RBP9.61□□□□□ -0.87
CAPN3-205ENST00000357568 BIVMQ86UB2 503 aa9.61□□□□□ -0.87
CAPN3-205ENST00000357568 RCBTB1Q8NDN9 531 aa9.61□□□□□ -0.87
CAPN3-205ENST00000357568 NUDCD2Q8WVJ2 157 aa9.61□□□□□ -0.87
CAPN3-205ENST00000357568 COL26A1Q96A83 441 aa9.61□□□□□ -0.87
CAPN3-205ENST00000357568 BCL2L14Q9BZR8 327 aa9.61□□□□□ -0.87
CAPN3-205ENST00000357568 ADAM19Q9H013 955 aa9.61□□□□□ -0.87
CAPN3-205ENST00000357568 SEC61A2Q9H9S3 476 aa9.61□□□□□ -0.87
CAPN3-205ENST00000357568 FBXO34Q9NWN3 711 aa9.61□□□□□ -0.87
CAPN3-205ENST00000357568 LPAR3Q9UBY5 353 aa9.61□□□□□ -0.87
CAPN3-205ENST00000357568 MMP17Q9ULZ9 603 aa9.61□□□□□ -0.87
CAPN3-205ENST00000357568 SIT1Q9Y3P8 196 aa9.61□□□□□ -0.87
CAPN3-205ENST00000357568 ADAM18Q9Y3Q7 739 aa9.61□□□□□ -0.87
CAPN3-205ENST00000357568 WIF1Q9Y5W5 379 aa9.61□□□□□ -0.87
CAPN3-205ENST00000357568 TMEM72A0PK05 275 aa9.61□□□□□ -0.87
CAPN3-205ENST00000357568 C9orf170A2RU37 121 aa9.61□□□□□ -0.87
CAPN3-205ENST00000357568 SCAMP1O15126 338 aa9.61□□□□□ -0.87
CAPN3-205ENST00000357568 LDLRAD4O15165 306 aa9.61□□□□□ -0.87
CAPN3-205ENST00000357568 ST8SIA5O15466 376 aa9.61□□□□□ -0.87
CAPN3-205ENST00000357568 ZNF208O43345 1280 aa9.61□□□□□ -0.87
CAPN3-205ENST00000357568 DUS4LO95620 317 aaKnown RBP9.61□□□□□ -0.87
CAPN3-205ENST00000357568 SDHAP31040 664 aa9.61□□□□□ -0.87
CAPN3-205ENST00000357568 MGAT2Q10469 447 aa9.61□□□□□ -0.87
CAPN3-205ENST00000357568 PRICKLE4Q2TBC4 344 aa9.61□□□□□ -0.87
CAPN3-205ENST00000357568 MST1LQ2TV78 715 aa9.61□□□□□ -0.87
CAPN3-205ENST00000357568 FNDC3BQ53EP0 1204 aaKnown RBP9.61□□□□□ -0.87
CAPN3-205ENST00000357568 YOD1Q5VVQ6 348 aaPredicted RBP9.61□□□□□ -0.87
CAPN3-205ENST00000357568 LEG1Q6P5S2 330 aa9.61□□□□□ -0.87
CAPN3-205ENST00000357568 TMED4Q7Z7H5 227 aa9.61□□□□□ -0.87
CAPN3-205ENST00000357568 ZNF561Q8N587 486 aa9.61□□□□□ -0.87
CAPN3-205ENST00000357568 LRRC75AQ8NAA5 344 aa9.61□□□□□ -0.87
CAPN3-205ENST00000357568 ASB17Q8WXJ9 295 aa9.61□□□□□ -0.87
CAPN3-205ENST00000357568 RSC1A1Q92681 617 aa9.61□□□□□ -0.87
CAPN3-205ENST00000357568 NUDT16L1Q9BRJ7 211 aaKnown RBP9.61□□□□□ -0.87
CAPN3-205ENST00000357568 TWSG1Q9GZX9 223 aa9.61□□□□□ -0.87
CAPN3-205ENST00000357568 ATG5Q9H1Y0 275 aa9.61□□□□□ -0.87
CAPN3-205ENST00000357568 FKRPQ9H9S5 495 aa9.61□□□□□ -0.87
CAPN3-205ENST00000357568 TREM1Q9NP99 234 aa9.61□□□□□ -0.87
CAPN3-205ENST00000357568 CYTL1Q9NRR1 136 aa9.61□□□□□ -0.87
CAPN3-205ENST00000357568 RPH3AQ9Y2J0 694 aaPredicted RBP9.61□□□□□ -0.87
CAPN3-205ENST00000357568 KLHDC2Q9Y2U9 406 aa9.61□□□□□ -0.87
CAPN3-205ENST00000357568 SPACA6W5XKT8 324 aa9.61□□□□□ -0.87
CAPN3-205ENST00000357568 NPIPA5A0A0B4J1W7 369 aa9.6□□□□□ -0.87
CAPN3-205ENST00000357568 METTL21EPA6NDL7 271 aa9.6□□□□□ -0.87
CAPN3-205ENST00000357568 OR6C76A6NM76 312 aa9.6□□□□□ -0.87
CAPN3-205ENST00000357568 NPIPA7E9PJI5 369 aa9.6□□□□□ -0.87
CAPN3-205ENST00000357568 NPIPB9F8W1W9 429 aa9.6□□□□□ -0.87
CAPN3-205ENST00000357568 WRBO00258 174 aa9.6□□□□□ -0.87
CAPN3-205ENST00000357568 MFNGO00587 321 aa9.6□□□□□ -0.87
CAPN3-205ENST00000357568 STATHP02808 62 aa9.6□□□□□ -0.87
CAPN3-205ENST00000357568 ITGA5P08648 1049 aa9.6□□□□□ -0.87
CAPN3-205ENST00000357568 NPIPA8P0DM63 369 aa9.6□□□□□ -0.87
CAPN3-205ENST00000357568 RCC1P18754 421 aaPredicted RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms