RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 NKD1Q969G9 470 aa4.93□□□□□ -1.62
CD47-201ENST00000355354 HRASLSQ9HDD0 168 aa4.93□□□□□ -1.62
CD47-201ENST00000355354 MCTS1Q9ULC4 181 aaKnown RBP4.93□□□□□ -1.62
CD47-201ENST00000355354 SAMD4AQ9UPU9 718 aaKnown RBP4.93□□□□□ -1.62
CD47-201ENST00000355354 CCDC187A0A096LP49 1063 aa4.93□□□□□ -1.62
CD47-201ENST00000355354 FAM240BA0A1B0GVZ2 78 aa4.93□□□□□ -1.62
CD47-201ENST00000355354 INMT-MINDY4F8WBC2 141 aa4.93□□□□□ -1.62
CD47-201ENST00000355354 H3BML4 177 aa4.93□□□□□ -1.62
CD47-201ENST00000355354 TOR1AO14656 332 aa4.93□□□□□ -1.62
CD47-201ENST00000355354 PRODHO43272 600 aa4.93□□□□□ -1.62
CD47-201ENST00000355354 FCN3O75636 299 aa4.93□□□□□ -1.62
CD47-201ENST00000355354 CD63P08962 238 aa4.93□□□□□ -1.62
CD47-201ENST00000355354 SULT1A3P0DMM9 295 aa4.93□□□□□ -1.62
CD47-201ENST00000355354 SULT1A4P0DMN0 295 aa4.93□□□□□ -1.62
CD47-201ENST00000355354 AHCYP23526 432 aa4.93□□□□□ -1.62
CD47-201ENST00000355354 RPS5P46782 204 aaKnown RBP4.93□□□□□ -1.62
CD47-201ENST00000355354 CLDN20P56880 219 aa4.93□□□□□ -1.62
CD47-201ENST00000355354 SPOCK1Q08629 439 aa4.93□□□□□ -1.62
CD47-201ENST00000355354 TOP3AQ13472 1001 aaPredicted RBP4.93□□□□□ -1.62
CD47-201ENST00000355354 TUBA3CQ13748 450 aa4.93□□□□□ -1.62
CD47-201ENST00000355354 GPR33Q49SQ1 333 aa4.93□□□□□ -1.62
CD47-201ENST00000355354 DCST1Q5T197 706 aa4.93□□□□□ -1.62
CD47-201ENST00000355354 IRAK1BP1Q5VVH5 260 aa4.93□□□□□ -1.62
CD47-201ENST00000355354 LIPJQ5W064 366 aa4.93□□□□□ -1.62
CD47-201ENST00000355354 OR8H3Q8N146 312 aa4.93□□□□□ -1.62
CD47-201ENST00000355354 FTMTQ8N4E7 242 aa4.93□□□□□ -1.62
CD47-201ENST00000355354 OR8J1Q8NGP2 316 aa4.93□□□□□ -1.62
CD47-201ENST00000355354 OR11L1Q8NGX0 322 aa4.93□□□□□ -1.62
CD47-201ENST00000355354 DCUN1D4Q92564 292 aa4.93□□□□□ -1.62
CD47-201ENST00000355354 SGK3Q96BR1 496 aa4.93□□□□□ -1.62
CD47-201ENST00000355354 METTL2AQ96IZ6 378 aaKnown RBP4.93□□□□□ -1.62
CD47-201ENST00000355354 WDFY2Q96P53 400 aa4.93□□□□□ -1.62
CD47-201ENST00000355354 C20orf24Q9BUV8 137 aa4.93□□□□□ -1.62
CD47-201ENST00000355354 TRIM15Q9C019 465 aa4.93□□□□□ -1.62
CD47-201ENST00000355354 VN1R1Q9GZP7 353 aa4.93□□□□□ -1.62
CD47-201ENST00000355354 ADAM19Q9H013 955 aa4.93□□□□□ -1.62
CD47-201ENST00000355354 SH3BGRL3Q9H299 93 aa4.93□□□□□ -1.62
CD47-201ENST00000355354 PROK2Q9HC23 129 aa4.93□□□□□ -1.62
CD47-201ENST00000355354 MYNNQ9NPC7 610 aa4.93□□□□□ -1.62
CD47-201ENST00000355354 EVPLLA8MZ36 301 aa4.93□□□□□ -1.62
CD47-201ENST00000355354 ALOX5P09917 674 aa4.93□□□□□ -1.62
CD47-201ENST00000355354 CAPZA1P52907 286 aa4.93□□□□□ -1.62
CD47-201ENST00000355354 NTRK2Q16620 822 aa4.93□□□□□ -1.62
CD47-201ENST00000355354 CLPPQ16740 277 aaPredicted RBP4.93□□□□□ -1.62
CD47-201ENST00000355354 ATP1A1-AS1Q5TC04 95 aa4.93□□□□□ -1.62
CD47-201ENST00000355354 HES3Q5TGS1 186 aa4.93□□□□□ -1.62
CD47-201ENST00000355354 ZNF385CQ66K41 422 aaPredicted RBP4.93□□□□□ -1.62
CD47-201ENST00000355354 ZNF776Q68DI1 518 aaPredicted RBP4.93□□□□□ -1.62
CD47-201ENST00000355354 RGS7BPQ6MZT1 257 aaPredicted RBP4.93□□□□□ -1.62
CD47-201ENST00000355354 SLC16A13Q7RTY0 426 aa4.93□□□□□ -1.62
CD47-201ENST00000355354 PLCZ1Q86YW0 608 aa4.93□□□□□ -1.62
CD47-201ENST00000355354 C19orf18Q8NEA5 215 aa4.93□□□□□ -1.62
CD47-201ENST00000355354 TNIP2Q8NFZ5 429 aa4.93□□□□□ -1.62
CD47-201ENST00000355354 OR4K14Q8NGD5 310 aa4.93□□□□□ -1.62
CD47-201ENST00000355354 TMEM171Q8WVE6 324 aa4.93□□□□□ -1.62
CD47-201ENST00000355354 ELMOD3Q96FG2 381 aa4.93□□□□□ -1.62
CD47-201ENST00000355354 SLC41A3Q96GZ6 507 aa4.93□□□□□ -1.62
CD47-201ENST00000355354 SP140LQ9H930 580 aa4.93□□□□□ -1.62
CD47-201ENST00000355354 MMP25Q9NPA2 562 aa4.93□□□□□ -1.62
CD47-201ENST00000355354 GPR173Q9NS66 373 aa4.93□□□□□ -1.62
CD47-201ENST00000355354 GLTPQ9NZD2 209 aa4.93□□□□□ -1.62
CD47-201ENST00000355354 TUBD1Q9UJT1 453 aa4.93□□□□□ -1.62
CD47-201ENST00000355354 VSIG4Q9Y279 399 aa4.93□□□□□ -1.62
CD47-201ENST00000355354 DBX1A6NMT0 343 aa4.92□□□□□ -1.62
CD47-201ENST00000355354 TSPAN4O14817 238 aa4.92□□□□□ -1.62
CD47-201ENST00000355354 PROP1O75360 226 aa4.92□□□□□ -1.62
CD47-201ENST00000355354 FAM157CP0CG43 387 aa4.92□□□□□ -1.62
CD47-201ENST00000355354 NID1P14543 1247 aa4.92□□□□□ -1.62
CD47-201ENST00000355354 CD38P28907 300 aa4.92□□□□□ -1.62
CD47-201ENST00000355354 PTGER4P35408 488 aa4.92□□□□□ -1.62
CD47-201ENST00000355354 UGT2B10P36537 528 aa4.92□□□□□ -1.62
CD47-201ENST00000355354 CCR9P51686 369 aa4.92□□□□□ -1.62
CD47-201ENST00000355354 DEFA3P59666 94 aa4.92□□□□□ -1.62
CD47-201ENST00000355354 ZNF273Q14593 569 aa4.92□□□□□ -1.62
CD47-201ENST00000355354 NMNAT2Q9BZQ4 307 aa4.92□□□□□ -1.62
CD47-201ENST00000355354 TAS2R7Q9NYW3 318 aa4.92□□□□□ -1.62
CD47-201ENST00000355354 MN1Q10571 1320 aaPredicted RBP4.92□□□□□ -1.62
CD47-201ENST00000355354 CDC40O60508 579 aaKnown RBP eCLIP4.92□□□□□ -1.62
CD47-201ENST00000355354 CRYZL1O95825 349 aa4.92□□□□□ -1.62
CD47-201ENST00000355354 IL18BPO95998 194 aa4.92□□□□□ -1.62
CD47-201ENST00000355354 ARG1P05089 322 aa4.92□□□□□ -1.62
CD47-201ENST00000355354 EGR1P18146 543 aa4.92□□□□□ -1.62
CD47-201ENST00000355354 C21orf58P58505 322 aa4.92□□□□□ -1.62
CD47-201ENST00000355354 GABARAPL2P60520 117 aa4.92□□□□□ -1.62
CD47-201ENST00000355354 ELP6Q0PNE2 266 aa4.92□□□□□ -1.62
CD47-201ENST00000355354 ZNF260Q3ZCT1 412 aa4.92□□□□□ -1.62
CD47-201ENST00000355354 FIP1L1Q6UN15 594 aaKnown RBP4.92□□□□□ -1.62
CD47-201ENST00000355354 Q6ZRM9 215 aa4.92□□□□□ -1.62
CD47-201ENST00000355354 IPCEF1Q8WWN9 437 aaPredicted RBP4.92□□□□□ -1.62
CD47-201ENST00000355354 PSMF1Q92530 271 aa4.92□□□□□ -1.62
CD47-201ENST00000355354 FRMD6Q96NE9 622 aa4.92□□□□□ -1.62
CD47-201ENST00000355354 ERMAPQ96PL5 475 aaPredicted RBP4.92□□□□□ -1.62
CD47-201ENST00000355354 SNX18Q96RF0 628 aa4.92□□□□□ -1.62
CD47-201ENST00000355354 PIGQQ9BRB3 760 aa4.92□□□□□ -1.62
CD47-201ENST00000355354 MFRPQ9BY79 579 aa4.92□□□□□ -1.62
CD47-201ENST00000355354 DYRK4Q9NR20 520 aa4.92□□□□□ -1.62
CD47-201ENST00000355354 BABAM2Q9NXR7 383 aa4.92□□□□□ -1.62
CD47-201ENST00000355354 NUPR1O60356 82 aa4.92□□□□□ -1.62
CD47-201ENST00000355354 SLC22A5O76082 557 aa4.92□□□□□ -1.62
CD47-201ENST00000355354 LY86O95711 162 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms