RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 CEP290O15078 2479 aa9.65□□□□□ -0.86
CAPN3-203ENST00000349748 MYO16Q9Y6X6 1858 aa9.65□□□□□ -0.86
CAPN3-203ENST00000349748 H3BSH0 61 aa9.65□□□□□ -0.86
CAPN3-203ENST00000349748 SCAF4O95104 1147 aaKnown RBP9.65□□□□□ -0.86
CAPN3-203ENST00000349748 TBX18O95935 607 aa9.65□□□□□ -0.86
CAPN3-203ENST00000349748 EDNRAP25101 427 aa9.65□□□□□ -0.86
CAPN3-203ENST00000349748 HSPB3Q12988 150 aa9.65□□□□□ -0.86
CAPN3-203ENST00000349748 BATFQ16520 125 aa9.65□□□□□ -0.86
CAPN3-203ENST00000349748 C17orf64Q86WR6 236 aa9.65□□□□□ -0.86
CAPN3-203ENST00000349748 GID4Q8IVV7 300 aa9.65□□□□□ -0.86
CAPN3-203ENST00000349748 CBARPQ8N350 705 aaPredicted RBP9.65□□□□□ -0.86
CAPN3-203ENST00000349748 OR13C8Q8NGS7 320 aa9.65□□□□□ -0.86
CAPN3-203ENST00000349748 TERB2Q8NHR7 220 aa9.65□□□□□ -0.86
CAPN3-203ENST00000349748 PELI1Q96FA3 418 aa9.65□□□□□ -0.86
CAPN3-203ENST00000349748 PDFQ9HBH1 243 aa9.65□□□□□ -0.86
CAPN3-203ENST00000349748 ADGRL4Q9HBW9 690 aa9.65□□□□□ -0.86
CAPN3-203ENST00000349748 MED19A0JLT2 244 aaPredicted RBP9.65□□□□□ -0.87
CAPN3-203ENST00000349748 SERTM1A2A2V5 107 aa9.65□□□□□ -0.87
CAPN3-203ENST00000349748 H7BY64 318 aa9.65□□□□□ -0.87
CAPN3-203ENST00000349748 ITGB1BP1O14713 200 aa9.65□□□□□ -0.87
CAPN3-203ENST00000349748 B3GAT3O94766 335 aa9.65□□□□□ -0.87
CAPN3-203ENST00000349748 CNOT4O95628 575 aaKnown RBP9.65□□□□□ -0.87
CAPN3-203ENST00000349748 TSPAN15O95858 294 aa9.65□□□□□ -0.87
CAPN3-203ENST00000349748 KLK1P06870 262 aa9.65□□□□□ -0.87
CAPN3-203ENST00000349748 GALNSP34059 522 aa9.65□□□□□ -0.87
CAPN3-203ENST00000349748 THBS4P35443 961 aa9.65□□□□□ -0.87
CAPN3-203ENST00000349748 NPY4RP50391 375 aa9.65□□□□□ -0.87
CAPN3-203ENST00000349748 OR5I1Q13606 314 aa9.65□□□□□ -0.87
CAPN3-203ENST00000349748 MIDNQ504T8 468 aa9.65□□□□□ -0.87
CAPN3-203ENST00000349748 DNM1P46Q6ZS02 220 aa9.65□□□□□ -0.87
CAPN3-203ENST00000349748 CD163Q86VB7 1156 aa9.65□□□□□ -0.87
CAPN3-203ENST00000349748 MAML2Q8IZL2 1156 aaPredicted RBP9.65□□□□□ -0.87
CAPN3-203ENST00000349748 GABRG1Q8N1C3 465 aa9.65□□□□□ -0.87
CAPN3-203ENST00000349748 CLEC1AQ8NC01 280 aa9.65□□□□□ -0.87
CAPN3-203ENST00000349748 HPSE2Q8WWQ2 592 aa9.65□□□□□ -0.87
CAPN3-203ENST00000349748 TMEM159Q96B96 161 aa9.65□□□□□ -0.87
CAPN3-203ENST00000349748 DNAJA3Q96EY1 480 aa9.65□□□□□ -0.87
CAPN3-203ENST00000349748 ADGRG7Q96K78 797 aa9.65□□□□□ -0.87
CAPN3-203ENST00000349748 SERINC2Q96SA4 455 aa9.65□□□□□ -0.87
CAPN3-203ENST00000349748 TAF9BQ9HBM6 251 aa9.65□□□□□ -0.87
CAPN3-203ENST00000349748 DNAJC4Q9NNZ3 241 aa9.65□□□□□ -0.87
CAPN3-203ENST00000349748 TMED3Q9Y3Q3 217 aa9.65□□□□□ -0.87
CAPN3-203ENST00000349748 PLXNA4Q9HCM2 1894 aa9.65□□□□□ -0.87
CAPN3-203ENST00000349748 LAMA3Q16787 3333 aa9.65□□□□□ -0.87
CAPN3-203ENST00000349748 A6NCN8 305 aa9.64□□□□□ -0.87
CAPN3-203ENST00000349748 AMBPP02760 352 aa9.64□□□□□ -0.87
CAPN3-203ENST00000349748 ZGLP1P0C6A0 271 aa9.64□□□□□ -0.87
CAPN3-203ENST00000349748 PTGER1P34995 402 aa9.64□□□□□ -0.87
CAPN3-203ENST00000349748 IFNGR2P38484 337 aa9.64□□□□□ -0.87
CAPN3-203ENST00000349748 TFPI2P48307 235 aa9.64□□□□□ -0.87
CAPN3-203ENST00000349748 LTBQ06643 244 aa9.64□□□□□ -0.87
CAPN3-203ENST00000349748 AMZ1Q400G9 498 aa9.64□□□□□ -0.87
CAPN3-203ENST00000349748 URM1Q9BTM9 101 aaKnown RBP9.64□□□□□ -0.87
CAPN3-203ENST00000349748 CST11Q9H112 138 aa9.64□□□□□ -0.87
CAPN3-203ENST00000349748 GAL3ST2Q9H3Q3 398 aa9.64□□□□□ -0.87
CAPN3-203ENST00000349748 CAPN10Q9HC96 672 aa9.64□□□□□ -0.87
CAPN3-203ENST00000349748 CHST11Q9NPF2 352 aa9.64□□□□□ -0.87
CAPN3-203ENST00000349748 KCNJ16Q9NPI9 418 aa9.64□□□□□ -0.87
CAPN3-203ENST00000349748 TAS2R8Q9NYW2 309 aa9.64□□□□□ -0.87
CAPN3-203ENST00000349748 OR5AC2Q9NZP5 309 aa9.64□□□□□ -0.87
CAPN3-203ENST00000349748 TAAR2Q9P1P5 351 aa9.64□□□□□ -0.87
CAPN3-203ENST00000349748 UPB1Q9UBR1 384 aa9.64□□□□□ -0.87
CAPN3-203ENST00000349748 CHTOPQ9Y3Y2 248 aaKnown RBP9.64□□□□□ -0.87
CAPN3-203ENST00000349748 SCN10AQ9Y5Y9 1956 aa9.64□□□□□ -0.87
CAPN3-203ENST00000349748 HELZP42694 1942 aaKnown RBP9.64□□□□□ -0.87
CAPN3-203ENST00000349748 TMEM269A0A1B0GVZ9 245 aa9.64□□□□□ -0.87
CAPN3-203ENST00000349748 SLC38A8A6NNN8 435 aa9.64□□□□□ -0.87
CAPN3-203ENST00000349748 DVL1O14640 695 aa9.64□□□□□ -0.87
CAPN3-203ENST00000349748 SOCS5O75159 536 aa9.64□□□□□ -0.87
CAPN3-203ENST00000349748 PGA4P0DJD7 388 aa9.64□□□□□ -0.87
CAPN3-203ENST00000349748 PGA5P0DJD9 388 aa9.64□□□□□ -0.87
CAPN3-203ENST00000349748 HKR1P10072 659 aa9.64□□□□□ -0.87
CAPN3-203ENST00000349748 NR2F1P10589 423 aa9.64□□□□□ -0.87
CAPN3-203ENST00000349748 IRF2P14316 349 aa9.64□□□□□ -0.87
CAPN3-203ENST00000349748 NDUFV2P19404 249 aa9.64□□□□□ -0.87
CAPN3-203ENST00000349748 MDKP21741 143 aaPredicted RBP9.64□□□□□ -0.87
CAPN3-203ENST00000349748 PPP2R1BP30154 601 aa9.64□□□□□ -0.87
CAPN3-203ENST00000349748 GATMP50440 423 aa9.64□□□□□ -0.87
CAPN3-203ENST00000349748 RAB1AP62820 205 aa9.64□□□□□ -0.87
CAPN3-203ENST00000349748 EIF2B1Q14232 305 aaKnown RBP9.64□□□□□ -0.87
CAPN3-203ENST00000349748 MOGAT2Q3SYC2 334 aa9.64□□□□□ -0.87
CAPN3-203ENST00000349748 SLC39A5Q6ZMH5 540 aa9.64□□□□□ -0.87
CAPN3-203ENST00000349748 MBOAT2Q6ZWT7 520 aa9.64□□□□□ -0.87
CAPN3-203ENST00000349748 DND1Q8IYX4 353 aaKnown RBP9.64□□□□□ -0.87
CAPN3-203ENST00000349748 ZNF283Q8N7M2 679 aa9.64□□□□□ -0.87
CAPN3-203ENST00000349748 SEPT5Q99719 369 aaPredicted RBP9.64□□□□□ -0.87
CAPN3-203ENST00000349748 MENTQ9BUN1 341 aa9.64□□□□□ -0.87
CAPN3-203ENST00000349748 SCRT1Q9BWW7 348 aa9.64□□□□□ -0.87
CAPN3-203ENST00000349748 PARP11Q9NR21 331 aa9.64□□□□□ -0.87
CAPN3-203ENST00000349748 CXXC1Q9P0U4 656 aaPredicted RBP9.64□□□□□ -0.87
CAPN3-203ENST00000349748 TRPC4Q9UBN4 977 aa9.64□□□□□ -0.87
CAPN3-203ENST00000349748 SUSD2Q9UGT4 822 aa9.64□□□□□ -0.87
CAPN3-203ENST00000349748 CRLS1Q9UJA2 301 aa9.64□□□□□ -0.87
CAPN3-203ENST00000349748 PRG3Q9Y2Y8 225 aaPredicted RBP9.64□□□□□ -0.87
CAPN3-203ENST00000349748 SYNDIG1LA6NDD5 238 aa9.63□□□□□ -0.87
CAPN3-203ENST00000349748 ZNF432O94892 652 aa9.63□□□□□ -0.87
CAPN3-203ENST00000349748 PAPLNO95428 1278 aa9.63□□□□□ -0.87
CAPN3-203ENST00000349748 GSTP1P09211 210 aaKnown RBP9.63□□□□□ -0.87
CAPN3-203ENST00000349748 ZNF28P17035 718 aa9.63□□□□□ -0.87
CAPN3-203ENST00000349748 EN2P19622 333 aaPredicted RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms