RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 ABHD3Q8WU67 409 aa12.03□□□□□ -0.48
CDC42-202ENST00000344548 C4orf45Q96LM5 186 aa12.03□□□□□ -0.48
CDC42-202ENST00000344548 SLC30A2Q9BRI3 323 aa12.03□□□□□ -0.48
CDC42-202ENST00000344548 TTYH2Q9BSA4 534 aa12.03□□□□□ -0.48
CDC42-202ENST00000344548 MROQ9BYG7 248 aa12.03□□□□□ -0.48
CDC42-202ENST00000344548 SLC25A18Q9H1K4 315 aa12.03□□□□□ -0.48
CDC42-202ENST00000344548 POLE4Q9NR33 117 aa12.03□□□□□ -0.48
CDC42-202ENST00000344548 KLHL9Q9P2J3 617 aa12.03□□□□□ -0.48
CDC42-202ENST00000344548 CYB5R1Q9UHQ9 305 aa12.03□□□□□ -0.48
CDC42-202ENST00000344548 hCG_2014768A0A024R1R8 64 aa12.03□□□□□ -0.48
CDC42-202ENST00000344548 CENPBD1B2RD01 187 aa12.03□□□□□ -0.48
CDC42-202ENST00000344548 NPIPA2E9PIF3 369 aa12.03□□□□□ -0.48
CDC42-202ENST00000344548 NPIPA3F8WFD2 350 aa12.03□□□□□ -0.48
CDC42-202ENST00000344548 HPGDSO60760 199 aa12.03□□□□□ -0.48
CDC42-202ENST00000344548 SRSF10O75494 262 aaKnown RBP12.03□□□□□ -0.48
CDC42-202ENST00000344548 PAHP00439 452 aa12.03□□□□□ -0.48
CDC42-202ENST00000344548 ETV6P41212 452 aa12.03□□□□□ -0.48
CDC42-202ENST00000344548 PMP22Q01453 160 aa12.03□□□□□ -0.48
CDC42-202ENST00000344548 POU4F3Q15319 338 aa12.03□□□□□ -0.48
CDC42-202ENST00000344548 TRAM1Q15629 374 aa12.03□□□□□ -0.48
CDC42-202ENST00000344548 TEX30Q5JUR7 227 aa12.03□□□□□ -0.48
CDC42-202ENST00000344548 CROCCP3Q8IVE0 287 aa12.03□□□□□ -0.48
CDC42-202ENST00000344548 IL17RDQ8NFM7 739 aa12.03□□□□□ -0.48
CDC42-202ENST00000344548 RNF128Q8TEB7 428 aa12.03□□□□□ -0.48
CDC42-202ENST00000344548 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.03□□□□□ -0.484e-9■■□□□ 13.6
CDC42-202ENST00000344548 GLTPQ9NZD2 209 aa12.03□□□□□ -0.48
CDC42-202ENST00000344548 CRNNQ9UBG3 495 aaPredicted RBP12.03□□□□□ -0.48
CDC42-202ENST00000344548 AK6Q9Y3D8 172 aaKnown RBP12.03□□□□□ -0.48
CDC42-202ENST00000344548 CMAHPQ9Y471 501 aa12.03□□□□□ -0.48
CDC42-202ENST00000344548 GJE1A6NN92 205 aa12.02□□□□□ -0.49
CDC42-202ENST00000344548 ZNF879B4DU55 563 aa12.02□□□□□ -0.49
CDC42-202ENST00000344548 CLDN18P56856 261 aa12.02□□□□□ -0.49
CDC42-202ENST00000344548 ARG2P78540 354 aa12.02□□□□□ -0.49
CDC42-202ENST00000344548 IDNKQ5T6J7 187 aa12.02□□□□□ -0.49
CDC42-202ENST00000344548 DTX3Q8N9I9 347 aa12.02□□□□□ -0.49
CDC42-202ENST00000344548 HAS2Q92819 552 aa12.02□□□□□ -0.49
CDC42-202ENST00000344548 MRPL48Q96GC5 212 aaKnown RBP12.02□□□□□ -0.49
CDC42-202ENST00000344548 DCBLD2Q96PD2 775 aa12.02□□□□□ -0.49
CDC42-202ENST00000344548 DERL3Q96Q80 235 aa12.02□□□□□ -0.49
CDC42-202ENST00000344548 NAA11Q9BSU3 229 aaPredicted RBP12.02□□□□□ -0.49
CDC42-202ENST00000344548 IRF2BPLQ9H1B7 796 aa12.02□□□□□ -0.49
CDC42-202ENST00000344548 ABCB10Q9NRK6 738 aa12.02□□□□□ -0.49
CDC42-202ENST00000344548 CENPMQ9NSP4 180 aa12.02□□□□□ -0.49
CDC42-202ENST00000344548 DAPK2Q9UIK4 370 aa12.02□□□□□ -0.49
CDC42-202ENST00000344548 FLVCR1Q9Y5Y0 555 aa12.02□□□□□ -0.49
CDC42-202ENST00000344548 ZNHIT1O43257 154 aa12.02□□□□□ -0.49
CDC42-202ENST00000344548 GPRIN2O60269 458 aa12.02□□□□□ -0.49
CDC42-202ENST00000344548 HRGP04196 525 aa12.02□□□□□ -0.49
CDC42-202ENST00000344548 PLGLB1Q02325 96 aa12.02□□□□□ -0.49
CDC42-202ENST00000344548 DEFB109BQ30KR1 87 aa12.02□□□□□ -0.49
CDC42-202ENST00000344548 ASPHD2Q6ICH7 369 aa12.02□□□□□ -0.49
CDC42-202ENST00000344548 TEX19Q8NA77 164 aa12.02□□□□□ -0.49
CDC42-202ENST00000344548 ASB17Q8WXJ9 295 aa12.02□□□□□ -0.49
CDC42-202ENST00000344548 TMEM54Q969K7 222 aa12.02□□□□□ -0.49
CDC42-202ENST00000344548 C14orf119Q9NWQ9 140 aa12.02□□□□□ -0.49
CDC42-202ENST00000344548 FOXD3Q9UJU5 478 aaPredicted RBP12.02□□□□□ -0.49
CDC42-202ENST00000344548 KLK13Q9UKR3 277 aa12.02□□□□□ -0.49
CDC42-202ENST00000344548 GTF2A1LQ9UNN4 478 aa12.02□□□□□ -0.49
CDC42-202ENST00000344548 EMC9Q9Y3B6 208 aa12.02□□□□□ -0.49
CDC42-202ENST00000344548 FREM1Q5H8C1 2179 aa12.01□□□□□ -0.49
CDC42-202ENST00000344548 TAF4O00268 1085 aa12.01□□□□□ -0.49
CDC42-202ENST00000344548 PHYHO14832 338 aa12.01□□□□□ -0.49
CDC42-202ENST00000344548 RER1O15258 196 aa12.01□□□□□ -0.49
CDC42-202ENST00000344548 AQP8O94778 261 aa12.01□□□□□ -0.49
CDC42-202ENST00000344548 VAMP5O95183 116 aa12.01□□□□□ -0.49
CDC42-202ENST00000344548 SRMP19623 302 aa12.01□□□□□ -0.49
CDC42-202ENST00000344548 AZGP1P25311 298 aaKnown RBP12.01□□□□□ -0.49
CDC42-202ENST00000344548 RRADP55042 308 aa12.01□□□□□ -0.49
CDC42-202ENST00000344548 PPIAP62937 165 aaKnown RBP12.01□□□□□ -0.49
CDC42-202ENST00000344548 ZNF45Q02386 682 aa12.01□□□□□ -0.49
CDC42-202ENST00000344548 YIF1BQ5BJH7 314 aa12.01□□□□□ -0.49
CDC42-202ENST00000344548 SFXN4Q6P4A7 337 aa12.01□□□□□ -0.49
CDC42-202ENST00000344548 LINGO2Q7L985 606 aa12.01□□□□□ -0.49
CDC42-202ENST00000344548 ZFP62Q8NB50 900 aaPredicted RBP12.01□□□□□ -0.49
CDC42-202ENST00000344548 OR6N1Q8NGY5 312 aa12.01□□□□□ -0.49
CDC42-202ENST00000344548 RNF133Q8WVZ7 376 aa12.01□□□□□ -0.49
CDC42-202ENST00000344548 SCMH1Q96GD3 660 aa12.01□□□□□ -0.49
CDC42-202ENST00000344548 CEP19Q96LK0 163 aa12.01□□□□□ -0.49
CDC42-202ENST00000344548 WDFY2Q96P53 400 aa12.01□□□□□ -0.49
CDC42-202ENST00000344548 DEFB127Q9H1M4 99 aa12.01□□□□□ -0.49
CDC42-202ENST00000344548 PALMDQ9NP74 551 aa12.01□□□□□ -0.49
CDC42-202ENST00000344548 BRD7Q9NPI1 651 aa12.01□□□□□ -0.49
CDC42-202ENST00000344548 ASH2LQ9UBL3 628 aa12.01□□□□□ -0.49
CDC42-202ENST00000344548 TRAV8-7A0A075B6U6 113 aa12□□□□□ -0.49
CDC42-202ENST00000344548 TRBV5-5A0A0J9YX44 114 aa12□□□□□ -0.49
CDC42-202ENST00000344548 A0A1B0GVC2 190 aa12□□□□□ -0.49
CDC42-202ENST00000344548 A6NIN4 97 aa12□□□□□ -0.49
CDC42-202ENST00000344548 SERPINA3P01011 423 aa12□□□□□ -0.49
CDC42-202ENST00000344548 ATF1P18846 271 aa12□□□□□ -0.49
CDC42-202ENST00000344548 CSNK1A1P48729 337 aa12□□□□□ -0.49
CDC42-202ENST00000344548 TNFSF10P50591 281 aa12□□□□□ -0.49
CDC42-202ENST00000344548 CDC20Q12834 499 aa12□□□□□ -0.49
CDC42-202ENST00000344548 ZNF766Q5HY98 468 aa12□□□□□ -0.49
CDC42-202ENST00000344548 SPANXN2Q5MJ10 180 aa12□□□□□ -0.49
CDC42-202ENST00000344548 STEAP3Q658P3 488 aa12□□□□□ -0.49
CDC42-202ENST00000344548 FDX2Q6P4F2 183 aa12□□□□□ -0.49
CDC42-202ENST00000344548 KCTD18Q6PI47 426 aaPredicted RBP12□□□□□ -0.49
CDC42-202ENST00000344548 ZNF676Q8N7Q3 588 aa12□□□□□ -0.49
CDC42-202ENST00000344548 ZNF454Q8N9F8 522 aa12□□□□□ -0.49
CDC42-202ENST00000344548 SLAMF6Q96DU3 332 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms