RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 ZNF250P15622 560 aa12.54□□□□□ -0.4
ERCC1-203ENST00000340192 SLC6A6P31641 620 aa12.54□□□□□ -0.4
ERCC1-203ENST00000340192 CDKN2AP42771 156 aaKnown RBP12.54□□□□□ -0.4
ERCC1-203ENST00000340192 GSSP48637 474 aa12.54□□□□□ -0.4
ERCC1-203ENST00000340192 GDI2P50395 445 aaKnown RBP12.54□□□□□ -0.4
ERCC1-203ENST00000340192 HMGA2P52926 109 aa12.54□□□□□ -0.4
ERCC1-203ENST00000340192 LOXL1Q08397 574 aaPredicted RBP12.54□□□□□ -0.4
ERCC1-203ENST00000340192 TSPAN31Q12999 210 aa12.54□□□□□ -0.4
ERCC1-203ENST00000340192 ZNF774Q6NX45 483 aa12.54□□□□□ -0.4
ERCC1-203ENST00000340192 PGBD2Q6P3X8 592 aa12.54□□□□□ -0.4
ERCC1-203ENST00000340192 GLB1L2Q8IW92 636 aa12.54□□□□□ -0.4
ERCC1-203ENST00000340192 ALDH16A1Q8IZ83 802 aa12.54□□□□□ -0.4
ERCC1-203ENST00000340192 ICA1LQ8NDH6 482 aa12.54□□□□□ -0.4
ERCC1-203ENST00000340192 GNPDA2Q8TDQ7 276 aa12.54□□□□□ -0.4
ERCC1-203ENST00000340192 NEU4Q8WWR8 484 aaPredicted RBP12.54□□□□□ -0.4
ERCC1-203ENST00000340192 ASB9Q96DX5 294 aa12.54□□□□□ -0.4
ERCC1-203ENST00000340192 SAMD8Q96LT4 415 aa12.54□□□□□ -0.4
ERCC1-203ENST00000340192 ERMAPQ96PL5 475 aaPredicted RBP12.54□□□□□ -0.4
ERCC1-203ENST00000340192 BCL2L14Q9BZR8 327 aa12.54□□□□□ -0.4
ERCC1-203ENST00000340192 COA3Q9Y2R0 106 aaPredicted RBP12.54□□□□□ -0.4
ERCC1-203ENST00000340192 RTTNQ86VV8 2226 aa12.54□□□□□ -0.4
ERCC1-203ENST00000340192 A0A1W2PPW3 197 aa12.53□□□□□ -0.4
ERCC1-203ENST00000340192 CD5LO43866 347 aa12.53□□□□□ -0.4
ERCC1-203ENST00000340192 KHDRBS3O75525 346 aaKnown RBP12.53□□□□□ -0.4
ERCC1-203ENST00000340192 UBOX5O94941 541 aa12.53□□□□□ -0.4
ERCC1-203ENST00000340192 CLPTM1O96005 669 aa12.53□□□□□ -0.4
ERCC1-203ENST00000340192 USF1P22415 310 aaPredicted RBP12.53□□□□□ -0.4
ERCC1-203ENST00000340192 WNT5AP41221 380 aa12.53□□□□□ -0.4
ERCC1-203ENST00000340192 NR4A2P43354 598 aa12.53□□□□□ -0.4
ERCC1-203ENST00000340192 KLF3P57682 345 aaPredicted RBP12.53□□□□□ -0.4
ERCC1-203ENST00000340192 PPP2R2BQ00005 443 aa12.53□□□□□ -0.4
ERCC1-203ENST00000340192 FAM98BQ52LJ0 330 aaKnown RBP12.53□□□□□ -0.4
ERCC1-203ENST00000340192 ZNF620Q6ZNG0 422 aa12.53□□□□□ -0.4
ERCC1-203ENST00000340192 SYT9Q86SS6 491 aa12.53□□□□□ -0.4
ERCC1-203ENST00000340192 ZNF101Q8IZC7 436 aa12.53□□□□□ -0.4
ERCC1-203ENST00000340192 OR9Q2Q8NGE9 314 aa12.53□□□□□ -0.4
ERCC1-203ENST00000340192 OR4C15Q8NGM1 316 aa12.53□□□□□ -0.4
ERCC1-203ENST00000340192 OR1J1Q8NGS3 322 aa12.53□□□□□ -0.4
ERCC1-203ENST00000340192 SYNPRQ8TBG9 265 aa12.53□□□□□ -0.4
ERCC1-203ENST00000340192 C11orf40Q8WZ69 217 aa12.53□□□□□ -0.4
ERCC1-203ENST00000340192 BTBD10Q9BSF8 475 aa12.53□□□□□ -0.4
ERCC1-203ENST00000340192 THTPAQ9BU02 230 aa12.53□□□□□ -0.4
ERCC1-203ENST00000340192 IFT27Q9BW83 186 aa12.53□□□□□ -0.4
ERCC1-203ENST00000340192 TRIM15Q9C019 465 aa12.53□□□□□ -0.4
ERCC1-203ENST00000340192 NUAK2Q9H093 628 aa12.53□□□□□ -0.4
ERCC1-203ENST00000340192 MS4A5Q9H3V2 200 aa12.53□□□□□ -0.4
ERCC1-203ENST00000340192 EIF3KQ9UBQ5 218 aaKnown RBP12.53□□□□□ -0.4
ERCC1-203ENST00000340192 HIVEP2P31629 2446 aa12.53□□□□□ -0.4
ERCC1-203ENST00000340192 ABCA1O95477 2261 aa12.52□□□□□ -0.41
ERCC1-203ENST00000340192 IGLV3-9A0A075B6K5 115 aa12.52□□□□□ -0.41
ERCC1-203ENST00000340192 ACOT8O14734 319 aa12.52□□□□□ -0.41
ERCC1-203ENST00000340192 ARPC3O15145 178 aa12.52□□□□□ -0.41
ERCC1-203ENST00000340192 MPZL1O95297 269 aa12.52□□□□□ -0.41
ERCC1-203ENST00000340192 NAT2P11245 290 aa12.52□□□□□ -0.41
ERCC1-203ENST00000340192 HIST1H1CP16403 213 aaKnown RBP12.52□□□□□ -0.41
ERCC1-203ENST00000340192 SELENOVP59797 346 aa12.52□□□□□ -0.41
ERCC1-203ENST00000340192 PPP1R8Q12972 351 aaKnown RBP12.52□□□□□ -0.41
ERCC1-203ENST00000340192 GGTLC2Q14390 218 aa12.52□□□□□ -0.41
ERCC1-203ENST00000340192 NKPD1Q17RQ9 610 aa12.52□□□□□ -0.41
ERCC1-203ENST00000340192 TMEM249Q2WGJ8 235 aa12.52□□□□□ -0.41
ERCC1-203ENST00000340192 ALKBH6Q3KRA9 238 aa12.52□□□□□ -0.41
ERCC1-203ENST00000340192 OTPQ5XKR4 325 aa12.52□□□□□ -0.41
ERCC1-203ENST00000340192 ZNF770Q6IQ21 691 aaPredicted RBP12.52□□□□□ -0.41
ERCC1-203ENST00000340192 LEG1Q6P5S2 330 aa12.52□□□□□ -0.41
ERCC1-203ENST00000340192 JAZF1Q86VZ6 243 aa12.52□□□□□ -0.41
ERCC1-203ENST00000340192 LINC00471Q8N535 108 aa12.52□□□□□ -0.41
ERCC1-203ENST00000340192 UBASH3BQ8TF42 649 aa12.52□□□□□ -0.41
ERCC1-203ENST00000340192 POP5Q969H6 163 aaKnown RBP12.52□□□□□ -0.41
ERCC1-203ENST00000340192 LRGUKQ96M69 825 aa12.52□□□□□ -0.41
ERCC1-203ENST00000340192 TSSK2Q96PF2 358 aa12.52□□□□□ -0.41
ERCC1-203ENST00000340192 NMNAT3Q96T66 252 aa12.52□□□□□ -0.41
ERCC1-203ENST00000340192 WACQ9BTA9 647 aa12.52□□□□□ -0.41
ERCC1-203ENST00000340192 VNN3Q9NY84 501 aa12.52□□□□□ -0.41
ERCC1-203ENST00000340192 TAAR3PQ9P1P4 343 aa12.52□□□□□ -0.41
ERCC1-203ENST00000340192 ANK3Q12955 4377 aaKnown RBP12.52□□□□□ -0.41
ERCC1-203ENST00000340192 LYNX1G3V0Z9 82 aa12.51□□□□□ -0.41
ERCC1-203ENST00000340192 DCTN6O00399 190 aa12.51□□□□□ -0.41
ERCC1-203ENST00000340192 GYG2O15488 501 aa12.51□□□□□ -0.41
ERCC1-203ENST00000340192 DOK2O60496 412 aa12.51□□□□□ -0.41
ERCC1-203ENST00000340192 CCNB2O95067 398 aa12.51□□□□□ -0.41
ERCC1-203ENST00000340192 STAMBPO95630 424 aa12.51□□□□□ -0.41
ERCC1-203ENST00000340192 GPANK1O95872 356 aa12.51□□□□□ -0.41
ERCC1-203ENST00000340192 GASTP01350 101 aa12.51□□□□□ -0.41
ERCC1-203ENST00000340192 LYNX1P0DP58 116 aa12.51□□□□□ -0.41
ERCC1-203ENST00000340192 GIFP27352 417 aa12.51□□□□□ -0.41
ERCC1-203ENST00000340192 NOS3P29474 1203 aa12.51□□□□□ -0.41
ERCC1-203ENST00000340192 CRABP1P29762 137 aa12.51□□□□□ -0.41
ERCC1-203ENST00000340192 SCRN3Q0VDG4 424 aa12.51□□□□□ -0.41
ERCC1-203ENST00000340192 TRAP1Q12931 704 aaKnown RBP12.51□□□□□ -0.41
ERCC1-203ENST00000340192 AQP6Q13520 282 aa12.51□□□□□ -0.41
ERCC1-203ENST00000340192 CLEC12AQ5QGZ9 265 aa12.51□□□□□ -0.41
ERCC1-203ENST00000340192 SPATA46Q5T0L3 261 aa12.51□□□□□ -0.41
ERCC1-203ENST00000340192 OR2T5Q6IEZ7 315 aa12.51□□□□□ -0.41
ERCC1-203ENST00000340192 DNM1P34Q6PK57 102 aa12.51□□□□□ -0.41
ERCC1-203ENST00000340192 ZNF786Q8N393 782 aa12.51□□□□□ -0.41
ERCC1-203ENST00000340192 OR2T29Q8NH02 315 aa12.51□□□□□ -0.41
ERCC1-203ENST00000340192 OR4K13Q8NH42 304 aa12.51□□□□□ -0.41
ERCC1-203ENST00000340192 BPESC1Q9GZL8 116 aa12.51□□□□□ -0.41
ERCC1-203ENST00000340192 EGLN3Q9H6Z9 239 aa12.51□□□□□ -0.41
ERCC1-203ENST00000340192 SLCO1C1Q9NYB5 712 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms