RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 IL23AQ9NPF7 189 aa12.09□□□□□ -0.47
COL2A1-201ENST00000337299 HRASLS2Q9NWW9 162 aa12.09□□□□□ -0.47
COL2A1-201ENST00000337299 TAF1LQ8IZX4 1826 aa12.09□□□□□ -0.47
COL2A1-201ENST00000337299 P2RY10O00398 339 aa12.09□□□□□ -0.47
COL2A1-201ENST00000337299 RNF224P0DH78 156 aa12.09□□□□□ -0.47
COL2A1-201ENST00000337299 CTSAP10619 480 aa12.09□□□□□ -0.47
COL2A1-201ENST00000337299 F2RL1P55085 397 aa12.09□□□□□ -0.47
COL2A1-201ENST00000337299 ELFN2Q5R3F8 820 aa12.09□□□□□ -0.47
COL2A1-201ENST00000337299 MRM1Q6IN84 353 aaKnown RBP12.09□□□□□ -0.47
COL2A1-201ENST00000337299 NECAP1Q8NC96 275 aa12.09□□□□□ -0.47
COL2A1-201ENST00000337299 OR1J1Q8NGS3 322 aa12.09□□□□□ -0.47
COL2A1-201ENST00000337299 THAP3Q8WTV1 239 aaPredicted RBP12.09□□□□□ -0.47
COL2A1-201ENST00000337299 DTD2Q96FN9 168 aa12.09□□□□□ -0.47
COL2A1-201ENST00000337299 G6PC3Q9BUM1 346 aa12.09□□□□□ -0.47
COL2A1-201ENST00000337299 RASL12Q9NYN1 266 aa12.09□□□□□ -0.47
COL2A1-201ENST00000337299 PRR13Q9NZ81 148 aa12.09□□□□□ -0.47
COL2A1-201ENST00000337299 MTFP1Q9UDX5 166 aa12.09□□□□□ -0.47
COL2A1-201ENST00000337299 DOCK3Q8IZD9 2030 aa12.09□□□□□ -0.47
COL2A1-201ENST00000337299 A0A1B0GV90 55 aa12.09□□□□□ -0.47
COL2A1-201ENST00000337299 ZNF724A8MTY0 619 aa12.09□□□□□ -0.47
COL2A1-201ENST00000337299 XRCC3O43542 346 aa12.09□□□□□ -0.47
COL2A1-201ENST00000337299 AK1P00568 194 aa12.09□□□□□ -0.47
COL2A1-201ENST00000337299 FGF2P09038 288 aa12.09□□□□□ -0.47
COL2A1-201ENST00000337299 PVRP15151 417 aa12.09□□□□□ -0.47
COL2A1-201ENST00000337299 RAB11AP62491 216 aa12.09□□□□□ -0.47
COL2A1-201ENST00000337299 AWAT1Q58HT5 328 aa12.09□□□□□ -0.47
COL2A1-201ENST00000337299 FBXO46Q6PJ61 603 aaPredicted RBP12.09□□□□□ -0.47
COL2A1-201ENST00000337299 ABHD12BQ7Z5M8 362 aaPredicted RBP12.09□□□□□ -0.47
COL2A1-201ENST00000337299 TCEAL8Q8IYN2 117 aa12.09□□□□□ -0.47
COL2A1-201ENST00000337299 TMEM123Q8N131 208 aa12.09□□□□□ -0.47
COL2A1-201ENST00000337299 OR51Q1Q8NH59 317 aa12.09□□□□□ -0.47
COL2A1-201ENST00000337299 CNRIP1Q96F85 164 aaPredicted RBP12.09□□□□□ -0.47
COL2A1-201ENST00000337299 BANF2Q9H503 90 aa12.09□□□□□ -0.47
COL2A1-201ENST00000337299 MMP26Q9NRE1 261 aa12.09□□□□□ -0.47
COL2A1-201ENST00000337299 KCND3Q9UK17 655 aa12.09□□□□□ -0.47
COL2A1-201ENST00000337299 AMDHD2Q9Y303 409 aa12.09□□□□□ -0.47
COL2A1-201ENST00000337299 MIA3Q5JRA6 1907 aa12.09□□□□□ -0.47
COL2A1-201ENST00000337299 ZFP92A6NM28 416 aa12.08□□□□□ -0.47
COL2A1-201ENST00000337299 PHYHO14832 338 aa12.08□□□□□ -0.47
COL2A1-201ENST00000337299 CD300LGQ6UXG3 332 aa12.08□□□□□ -0.47
COL2A1-201ENST00000337299 LYG2Q86SG7 212 aa12.08□□□□□ -0.47
COL2A1-201ENST00000337299 OR52E1Q8NGJ3 308 aa12.08□□□□□ -0.47
COL2A1-201ENST00000337299 OR6N1Q8NGY5 312 aa12.08□□□□□ -0.47
COL2A1-201ENST00000337299 NRTNQ99748 197 aa12.08□□□□□ -0.47
COL2A1-201ENST00000337299 EDEM2Q9BV94 578 aa12.08□□□□□ -0.47
COL2A1-201ENST00000337299 WASF3Q9UPY6 502 aa12.08□□□□□ -0.47
COL2A1-201ENST00000337299 TMEM150CB9EJG8 249 aa12.08□□□□□ -0.48
COL2A1-201ENST00000337299 XRCC2O43543 280 aa12.08□□□□□ -0.48
COL2A1-201ENST00000337299 VSIG10L2P0DP72 767 aa12.08□□□□□ -0.48
COL2A1-201ENST00000337299 ZNF136P52737 540 aa12.08□□□□□ -0.48
COL2A1-201ENST00000337299 ZP1P60852 638 aa12.08□□□□□ -0.48
COL2A1-201ENST00000337299 TGIF1Q15583 401 aa12.08□□□□□ -0.48
COL2A1-201ENST00000337299 MIDNQ504T8 468 aa12.08□□□□□ -0.48
COL2A1-201ENST00000337299 ADGRE4PQ86SQ3 457 aa12.08□□□□□ -0.48
COL2A1-201ENST00000337299 PLPP5Q8NEB5 264 aa12.08□□□□□ -0.48
COL2A1-201ENST00000337299 MMABQ96EY8 250 aaPredicted RBP12.08□□□□□ -0.48
COL2A1-201ENST00000337299 SDF2Q99470 211 aa12.08□□□□□ -0.48
COL2A1-201ENST00000337299 FKRPQ9H9S5 495 aa12.08□□□□□ -0.48
COL2A1-201ENST00000337299 PATZ1Q9HBE1 687 aaKnown RBP12.08□□□□□ -0.48
COL2A1-201ENST00000337299 PRTFDC1Q9NRG1 225 aa12.08□□□□□ -0.48
COL2A1-201ENST00000337299 A0A1W2PP55 124 aa12.08□□□□□ -0.48
COL2A1-201ENST00000337299 A0A1W2PPE2 198 aa12.08□□□□□ -0.48
COL2A1-201ENST00000337299 PRKNO60260 465 aaPredicted RBP12.08□□□□□ -0.48
COL2A1-201ENST00000337299 DNAJB6O75190 326 aa12.08□□□□□ -0.48
COL2A1-201ENST00000337299 BSGP35613 385 aa12.08□□□□□ -0.48
COL2A1-201ENST00000337299 CSNK1G2P78368 415 aa12.08□□□□□ -0.48
COL2A1-201ENST00000337299 DHCR24Q15392 516 aa12.08□□□□□ -0.48
COL2A1-201ENST00000337299 SLC48A1Q6P1K1 146 aa12.08□□□□□ -0.48
COL2A1-201ENST00000337299 CAMKMTQ7Z624 323 aa12.08□□□□□ -0.48
COL2A1-201ENST00000337299 FGGYQ96C11 551 aa12.08□□□□□ -0.48
COL2A1-201ENST00000337299 GSN-AS1Q9NRJ2 163 aa12.08□□□□□ -0.48
COL2A1-201ENST00000337299 PLEKHJ1Q9NW61 149 aa12.08□□□□□ -0.48
COL2A1-201ENST00000337299 SLC23A2Q9UGH3 650 aa12.08□□□□□ -0.48
COL2A1-201ENST00000337299 SF3B6Q9Y3B4 125 aaKnown RBP12.08□□□□□ -0.48
COL2A1-201ENST00000337299 PHIPQ8WWQ0 1821 aa12.08□□□□□ -0.48
COL2A1-201ENST00000337299 TMEM189-UBE2V1I3L0A0 370 aa12.08□□□□□ -0.48
COL2A1-201ENST00000337299 GLCEO94923 617 aa12.08□□□□□ -0.48
COL2A1-201ENST00000337299 DIRAS3O95661 229 aa12.08□□□□□ -0.48
COL2A1-201ENST00000337299 RPL12P30050 165 aaKnown RBP12.08□□□□□ -0.48
COL2A1-201ENST00000337299 DIO1P49895 249 aa12.08□□□□□ -0.48
COL2A1-201ENST00000337299 RAB4BP61018 213 aa12.08□□□□□ -0.48
COL2A1-201ENST00000337299 RPL23AP62750 156 aaKnown RBP12.08□□□□□ -0.48
COL2A1-201ENST00000337299 SERTAD2Q14140 314 aa12.08□□□□□ -0.48
COL2A1-201ENST00000337299 C12orf40Q86WS4 652 aa12.08□□□□□ -0.48
COL2A1-201ENST00000337299 ZNF784Q8NCA9 323 aaPredicted RBP12.08□□□□□ -0.48
COL2A1-201ENST00000337299 TMEM104Q8NE00 496 aa12.08□□□□□ -0.48
COL2A1-201ENST00000337299 INTS12Q96CB8 462 aaKnown RBP12.08□□□□□ -0.48
COL2A1-201ENST00000337299 PGAM5Q96HS1 289 aa12.08□□□□□ -0.48
COL2A1-201ENST00000337299 SLC7A11Q9UPY5 501 aa12.08□□□□□ -0.48
COL2A1-201ENST00000337299 DNASE2O00115 360 aaPredicted RBP12.07□□□□□ -0.48
COL2A1-201ENST00000337299 OPN1LWP04000 364 aa12.07□□□□□ -0.48
COL2A1-201ENST00000337299 ERV3-1Q14264 604 aa12.07□□□□□ -0.48
COL2A1-201ENST00000337299 CST9LP1Q5W188 147 aa12.07□□□□□ -0.48
COL2A1-201ENST00000337299 PWWP2BQ6NUJ5 590 aa12.07□□□□□ -0.48
COL2A1-201ENST00000337299 RPUSD3Q6P087 351 aaKnown RBP12.07□□□□□ -0.48
COL2A1-201ENST00000337299 SYS1Q8N2H4 156 aa12.07□□□□□ -0.48
COL2A1-201ENST00000337299 DIO2Q92813 273 aa12.07□□□□□ -0.48
COL2A1-201ENST00000337299 THOC3Q96J01 351 aaKnown RBP12.07□□□□□ -0.48
COL2A1-201ENST00000337299 MCOLN1Q9GZU1 580 aa12.07□□□□□ -0.48
COL2A1-201ENST00000337299 RAB33BQ9H082 229 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms