RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 TNFSF15O95150 251 aa7.83□□□□□ -1.16
TDP1-201ENST00000335725 CXCL1P09341 107 aa7.83□□□□□ -1.16
TDP1-201ENST00000335725 SNRPBP14678 240 aaKnown RBP7.83□□□□□ -1.16
TDP1-201ENST00000335725 HOXB9P17482 250 aaPredicted RBP7.83□□□□□ -1.16
TDP1-201ENST00000335725 FPR2P25090 351 aa7.83□□□□□ -1.16
TDP1-201ENST00000335725 OR3A2P47893 321 aa7.83□□□□□ -1.16
TDP1-201ENST00000335725 RPS14P62263 151 aaKnown RBP7.83□□□□□ -1.16
TDP1-201ENST00000335725 SLC6A3Q01959 620 aa7.83□□□□□ -1.16
TDP1-201ENST00000335725 IL24Q13007 206 aa7.83□□□□□ -1.16
TDP1-201ENST00000335725 LASP1Q14847 261 aaKnown RBP7.83□□□□□ -1.16
TDP1-201ENST00000335725 TKFCQ3LXA3 575 aa7.83□□□□□ -1.16
TDP1-201ENST00000335725 MORN2Q502X0 79 aa7.83□□□□□ -1.16
TDP1-201ENST00000335725 CST9Q5W186 159 aa7.83□□□□□ -1.16
TDP1-201ENST00000335725 GPSM1Q86YR5 675 aa7.83□□□□□ -1.16
TDP1-201ENST00000335725 OR13C5Q8NGS8 318 aa7.83□□□□□ -1.16
TDP1-201ENST00000335725 NUDT8Q8WV74 236 aa7.83□□□□□ -1.16
TDP1-201ENST00000335725 TSLPQ969D9 159 aa7.83□□□□□ -1.16
TDP1-201ENST00000335725 S100A16Q96FQ6 103 aaKnown RBP7.83□□□□□ -1.16
TDP1-201ENST00000335725 C1orf198Q9H425 327 aa7.83□□□□□ -1.16
TDP1-201ENST00000335725 SLC23A2Q9UGH3 650 aa7.83□□□□□ -1.16
TDP1-201ENST00000335725 TAAR5O14804 337 aa7.82□□□□□ -1.16
TDP1-201ENST00000335725 MMP23AO75900 390 aa7.82□□□□□ -1.16
TDP1-201ENST00000335725 LIPFP07098 398 aa7.82□□□□□ -1.16
TDP1-201ENST00000335725 LIPCP11150 499 aa7.82□□□□□ -1.16
TDP1-201ENST00000335725 SRMP19623 302 aa7.82□□□□□ -1.16
TDP1-201ENST00000335725 MMP11P24347 488 aa7.82□□□□□ -1.16
TDP1-201ENST00000335725 PSMB10P40306 273 aa7.82□□□□□ -1.16
TDP1-201ENST00000335725 AQP2P41181 271 aa7.82□□□□□ -1.16
TDP1-201ENST00000335725 ARHGAP11BQ3KRB8 267 aa7.82□□□□□ -1.16
TDP1-201ENST00000335725 ERFEQ4G0M1 354 aa7.82□□□□□ -1.16
TDP1-201ENST00000335725 FAAP20Q6NZ36 180 aa7.82□□□□□ -1.16
TDP1-201ENST00000335725 TCF24Q7RTU0 167 aa7.82□□□□□ -1.16
TDP1-201ENST00000335725 KRTCAP2Q8N6L1 136 aa7.82□□□□□ -1.16
TDP1-201ENST00000335725 SUMF2Q8NBJ7 301 aa7.82□□□□□ -1.16
TDP1-201ENST00000335725 OR5B17Q8NGF7 314 aa7.82□□□□□ -1.16
TDP1-201ENST00000335725 FAM222BQ8WU58 562 aa7.82□□□□□ -1.16
TDP1-201ENST00000335725 PINX1Q96BK5 328 aaKnown RBP7.82□□□□□ -1.16
TDP1-201ENST00000335725 LRTM1Q9HBL6 345 aa7.82□□□□□ -1.16
TDP1-201ENST00000335725 RHCGQ9UBD6 479 aa7.82□□□□□ -1.16
TDP1-201ENST00000335725 PPP1R3CQ9UQK1 317 aa7.82□□□□□ -1.16
TDP1-201ENST00000335725 SNX10Q9Y5X0 201 aa7.82□□□□□ -1.16
TDP1-201ENST00000335725 ITGB4P16144 1822 aa7.82□□□□□ -1.16
TDP1-201ENST00000335725 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.82□□□□□ -1.16
TDP1-201ENST00000335725 A0A0G2JK05 382 aa7.82□□□□□ -1.16
TDP1-201ENST00000335725 PRAMEF26H0Y7S4 382 aa7.82□□□□□ -1.16
TDP1-201ENST00000335725 NME2P1O60361 137 aa7.82□□□□□ -1.16
TDP1-201ENST00000335725 PRAMEF11O60813 436 aa7.82□□□□□ -1.16
TDP1-201ENST00000335725 ECI2O75521 394 aa7.82□□□□□ -1.16
TDP1-201ENST00000335725 OR6A2O95222 327 aa7.82□□□□□ -1.16
TDP1-201ENST00000335725 MMP2P08253 660 aa7.82□□□□□ -1.16
TDP1-201ENST00000335725 CTSSP25774 331 aa7.82□□□□□ -1.16
TDP1-201ENST00000335725 XCR1P46094 333 aa7.82□□□□□ -1.16
TDP1-201ENST00000335725 C5orf64Q2M2E5 130 aa7.82□□□□□ -1.16
TDP1-201ENST00000335725 PRAMEF5Q5TYX0 476 aa7.82□□□□□ -1.16
TDP1-201ENST00000335725 PRAMEF6Q5VXH4 476 aa7.82□□□□□ -1.16
TDP1-201ENST00000335725 Q6ZRG5 221 aa7.82□□□□□ -1.16
TDP1-201ENST00000335725 ZNF621Q6ZSS3 439 aa7.82□□□□□ -1.16
TDP1-201ENST00000335725 BCDIN3DQ7Z5W3 292 aaKnown RBP7.82□□□□□ -1.16
TDP1-201ENST00000335725 CEACAM19Q7Z692 300 aa7.82□□□□□ -1.16
TDP1-201ENST00000335725 C1orf216Q8TAB5 229 aa7.82□□□□□ -1.16
TDP1-201ENST00000335725 SPRYD4Q8WW59 207 aaPredicted RBP7.82□□□□□ -1.16
TDP1-201ENST00000335725 PDCD2LQ9BRP1 358 aa7.82□□□□□ -1.16
TDP1-201ENST00000335725 CNTNAP3Q9BZ76 1288 aa7.82□□□□□ -1.16
TDP1-201ENST00000335725 ULBP1Q9BZM6 244 aa7.82□□□□□ -1.16
TDP1-201ENST00000335725 RBKSQ9H477 322 aa7.82□□□□□ -1.16
TDP1-201ENST00000335725 TAS2R13Q9NYV9 303 aa7.82□□□□□ -1.16
TDP1-201ENST00000335725 KLK11Q9UBX7 282 aa7.82□□□□□ -1.16
TDP1-201ENST00000335725 RAB22AQ9UL26 194 aa7.82□□□□□ -1.16
TDP1-201ENST00000335725 OR51B4Q9Y5P0 310 aa7.82□□□□□ -1.16
TDP1-201ENST00000335725 MIA3Q5JRA6 1907 aa7.82□□□□□ -1.16
TDP1-201ENST00000335725 TRAV1-2A0A0B4J238 106 aa7.82□□□□□ -1.16
TDP1-201ENST00000335725 RAB40ALP0C0E4 278 aa7.82□□□□□ -1.16
TDP1-201ENST00000335725 STAG3L2P0CL84 134 aa7.82□□□□□ -1.16
TDP1-201ENST00000335725 PGA4P0DJD7 388 aa7.82□□□□□ -1.16
TDP1-201ENST00000335725 PGA5P0DJD9 388 aa7.82□□□□□ -1.16
TDP1-201ENST00000335725 ZBTB25P24278 435 aa7.82□□□□□ -1.16
TDP1-201ENST00000335725 PDX1P52945 283 aa7.82□□□□□ -1.16
TDP1-201ENST00000335725 ATP1B3P54709 279 aa7.82□□□□□ -1.16
TDP1-201ENST00000335725 GEMP55040 296 aa7.82□□□□□ -1.16
TDP1-201ENST00000335725 ERVPABLB-1P60509 514 aa7.82□□□□□ -1.16
TDP1-201ENST00000335725 CYCSP99999 105 aaKnown RBP7.82□□□□□ -1.16
TDP1-201ENST00000335725 INSL4Q14641 139 aa7.82□□□□□ -1.16
TDP1-201ENST00000335725 MLC1Q15049 377 aa7.82□□□□□ -1.16
TDP1-201ENST00000335725 UGCGQ16739 394 aa7.82□□□□□ -1.16
TDP1-201ENST00000335725 SLC25A35Q3KQZ1 300 aa7.82□□□□□ -1.16
TDP1-201ENST00000335725 Q6ZVU0 165 aa7.82□□□□□ -1.16
TDP1-201ENST00000335725 C17orf64Q86WR6 236 aa7.82□□□□□ -1.16
TDP1-201ENST00000335725 MTURNQ8N3F0 131 aa7.82□□□□□ -1.16
TDP1-201ENST00000335725 CXorf40AQ8TE69 158 aa7.82□□□□□ -1.16
TDP1-201ENST00000335725 TMEM40Q8WWA1 233 aa7.82□□□□□ -1.16
TDP1-201ENST00000335725 RAB40AQ8WXH6 277 aa7.82□□□□□ -1.16
TDP1-201ENST00000335725 DCUN1D4Q92564 292 aa7.82□□□□□ -1.16
TDP1-201ENST00000335725 ATP6V0BQ99437 205 aa7.82□□□□□ -1.16
TDP1-201ENST00000335725 ZBP1Q9H171 429 aa7.82□□□□□ -1.16
TDP1-201ENST00000335725 CHODLQ9H9P2 273 aa7.82□□□□□ -1.16
TDP1-201ENST00000335725 TXNRD2Q9NNW7 524 aa7.82□□□□□ -1.16
TDP1-201ENST00000335725 TRIM36Q9NQ86 728 aa7.82□□□□□ -1.16
TDP1-201ENST00000335725 GPATCH2Q9NW75 528 aa7.82□□□□□ -1.16
TDP1-201ENST00000335725 PLEK2Q9NYT0 353 aa7.82□□□□□ -1.16
TDP1-201ENST00000335725 SIX4Q9UIU6 781 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms