RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 SLC6A8P48029 635 aa13.6□□□□□ -0.23
CSDC2-201ENST00000306149 ARL4DP49703 201 aa13.6□□□□□ -0.23
CSDC2-201ENST00000306149 EIF2B1Q14232 305 aaKnown RBP13.6□□□□□ -0.23
CSDC2-201ENST00000306149 PXDC1Q5TGL8 231 aa13.6□□□□□ -0.23
CSDC2-201ENST00000306149 TSTD1Q8NFU3 115 aa13.6□□□□□ -0.23
CSDC2-201ENST00000306149 ASB13Q8WXK3 278 aa13.6□□□□□ -0.23
CSDC2-201ENST00000306149 CXorf58Q96LI9 332 aa13.6□□□□□ -0.23
CSDC2-201ENST00000306149 LINC00052Q96N35 136 aa13.6□□□□□ -0.23
CSDC2-201ENST00000306149 ABHD6Q9BV23 337 aa13.6□□□□□ -0.23
CSDC2-201ENST00000306149 TMEM138Q9NPI0 162 aa13.6□□□□□ -0.23
CSDC2-201ENST00000306149 TAS2R4Q9NYW5 299 aa13.6□□□□□ -0.23
CSDC2-201ENST00000306149 COA3Q9Y2R0 106 aaPredicted RBP13.6□□□□□ -0.23
CSDC2-201ENST00000306149 RTTNQ86VV8 2226 aa13.6□□□□□ -0.23
CSDC2-201ENST00000306149 F5H5P2 479 aa13.6□□□□□ -0.23
CSDC2-201ENST00000306149 SOX1O00570 391 aaPredicted RBP13.6□□□□□ -0.23
CSDC2-201ENST00000306149 GOSR2O14653 212 aa13.6□□□□□ -0.23
CSDC2-201ENST00000306149 PHYHO14832 338 aa13.6□□□□□ -0.23
CSDC2-201ENST00000306149 CSF2RBP32927 897 aa13.6□□□□□ -0.23
CSDC2-201ENST00000306149 PTGS2P35354 604 aa13.6□□□□□ -0.23
CSDC2-201ENST00000306149 MAP2K6P52564 334 aa13.6□□□□□ -0.23
CSDC2-201ENST00000306149 FMODQ06828 376 aa13.6□□□□□ -0.23
CSDC2-201ENST00000306149 ELAVL1Q15717 326 aaKnown RBP13.6□□□□□ -0.23
CSDC2-201ENST00000306149 RAB30Q15771 203 aa13.6□□□□□ -0.23
CSDC2-201ENST00000306149 MPPED2Q15777 294 aa13.6□□□□□ -0.23
CSDC2-201ENST00000306149 GLYATL3Q5SZD4 288 aa13.6□□□□□ -0.23
CSDC2-201ENST00000306149 SLC18B1Q6NT16 456 aa13.6□□□□□ -0.23
CSDC2-201ENST00000306149 ZNF627Q7L945 461 aa13.6□□□□□ -0.23
CSDC2-201ENST00000306149 WDFY1Q8IWB7 410 aa13.6□□□□□ -0.23
CSDC2-201ENST00000306149 OR2AK2Q8NG84 335 aa13.6□□□□□ -0.23
CSDC2-201ENST00000306149 ZNF519Q8TB69 540 aa13.6□□□□□ -0.23
CSDC2-201ENST00000306149 PMEPA1Q969W9 287 aa13.6□□□□□ -0.23
CSDC2-201ENST00000306149 WWTR1Q9GZV5 400 aa13.6□□□□□ -0.23
CSDC2-201ENST00000306149 DHDHQ9UQ10 334 aa13.6□□□□□ -0.23
CSDC2-201ENST00000306149 FXYD6-FXYD2A0A087WZ82 144 aa13.59□□□□□ -0.23
CSDC2-201ENST00000306149 ARPC4-TTLL3A0A0A6YYG9 625 aa13.59□□□□□ -0.23
CSDC2-201ENST00000306149 IGLV1-36A0A0B4J1U3 117 aa13.59□□□□□ -0.23
CSDC2-201ENST00000306149 ALG1L2C9J202 215 aa13.59□□□□□ -0.23
CSDC2-201ENST00000306149 H3BMH7 237 aa13.59□□□□□ -0.23
CSDC2-201ENST00000306149 CDK2AP1O14519 115 aa13.59□□□□□ -0.23
CSDC2-201ENST00000306149 LMX1BO60663 402 aa13.59□□□□□ -0.23
CSDC2-201ENST00000306149 AKAIN1P0CW23 69 aa13.59□□□□□ -0.23
CSDC2-201ENST00000306149 FOLR1P15328 257 aa13.59□□□□□ -0.23
CSDC2-201ENST00000306149 PGCP20142 388 aa13.59□□□□□ -0.23
CSDC2-201ENST00000306149 PRSS3P35030 304 aa13.59□□□□□ -0.23
CSDC2-201ENST00000306149 NUP62P37198 522 aaPredicted RBP13.59□□□□□ -0.23
CSDC2-201ENST00000306149 SSBP1Q04837 148 aaKnown RBP13.59□□□□□ -0.23
CSDC2-201ENST00000306149 SGCBQ16585 318 aa13.59□□□□□ -0.23
CSDC2-201ENST00000306149 C1orf140Q5VVS0 124 aa13.59□□□□□ -0.23
CSDC2-201ENST00000306149 TMEM225Q6GV28 225 aa13.59□□□□□ -0.23
CSDC2-201ENST00000306149 ALKAL2Q6UX46 152 aa13.59□□□□□ -0.23
CSDC2-201ENST00000306149 NUP54Q7Z3B4 507 aa13.59□□□□□ -0.23
CSDC2-201ENST00000306149 LINC00346Q8IVM7 164 aa13.59□□□□□ -0.23
CSDC2-201ENST00000306149 LHFPL5Q8TAF8 219 aa13.59□□□□□ -0.23
CSDC2-201ENST00000306149 RNF128Q8TEB7 428 aa13.59□□□□□ -0.23
CSDC2-201ENST00000306149 ASB5Q8WWX0 329 aa13.59□□□□□ -0.23
CSDC2-201ENST00000306149 C8orf44Q96CB5 159 aa13.59□□□□□ -0.23
CSDC2-201ENST00000306149 ZDHHC12Q96GR4 267 aa13.59□□□□□ -0.23
CSDC2-201ENST00000306149 FXYD6Q9H0Q3 95 aa13.59□□□□□ -0.23
CSDC2-201ENST00000306149 MMACHCQ9Y4U1 282 aa13.59□□□□□ -0.23
CSDC2-201ENST00000306149 LRP12Q9Y561 859 aa13.59□□□□□ -0.23
CSDC2-201ENST00000306149 SLC22A23A1A5C7 686 aa13.59□□□□□ -0.23
CSDC2-201ENST00000306149 GABRA1P14867 456 aa13.59□□□□□ -0.23
CSDC2-201ENST00000306149 CFHR1Q03591 330 aa13.59□□□□□ -0.23
CSDC2-201ENST00000306149 SPOCK1Q08629 439 aa13.59□□□□□ -0.23
CSDC2-201ENST00000306149 LRFN4Q6PJG9 635 aa13.59□□□□□ -0.23
CSDC2-201ENST00000306149 MED11Q9P086 117 aa13.59□□□□□ -0.23
CSDC2-201ENST00000306149 EMC9Q9Y3B6 208 aa13.59□□□□□ -0.23
CSDC2-201ENST00000306149 MRPS18BQ9Y676 258 aaKnown RBP13.59□□□□□ -0.23
CSDC2-201ENST00000306149 LOC100289279A0A1B0GTE1 492 aa13.58□□□□□ -0.24
CSDC2-201ENST00000306149 TCRBV16S1A1N1A0A5B0 115 aa13.58□□□□□ -0.24
CSDC2-201ENST00000306149 A8MXK9 166 aa13.58□□□□□ -0.24
CSDC2-201ENST00000306149 M0QYG6 137 aa13.58□□□□□ -0.24
CSDC2-201ENST00000306149 SLC17A2O00624 439 aa13.58□□□□□ -0.24
CSDC2-201ENST00000306149 GK2Q14410 553 aaPredicted RBP13.58□□□□□ -0.24
CSDC2-201ENST00000306149 C4orf46Q504U0 113 aa13.58□□□□□ -0.24
CSDC2-201ENST00000306149 FDX2Q6P4F2 183 aa13.58□□□□□ -0.24
CSDC2-201ENST00000306149 TNFAIP8L1Q8WVP5 186 aa13.58□□□□□ -0.24
CSDC2-201ENST00000306149 DPYSL5Q9BPU6 564 aa13.58□□□□□ -0.24
CSDC2-201ENST00000306149 DUSP15Q9H1R2 295 aaPredicted RBP13.58□□□□□ -0.24
CSDC2-201ENST00000306149 TXNIPQ9H3M7 391 aa13.58□□□□□ -0.24
CSDC2-201ENST00000306149 EXO5Q9H790 373 aa13.58□□□□□ -0.24
CSDC2-201ENST00000306149 SLC17A5Q9NRA2 495 aa13.58□□□□□ -0.24
CSDC2-201ENST00000306149 PFDN2Q9UHV9 154 aa13.58□□□□□ -0.24
CSDC2-201ENST00000306149 CPAMD8Q8IZJ3 1885 aa13.58□□□□□ -0.24
CSDC2-201ENST00000306149 LOC101059948A0A1B0GTJ6 334 aa13.58□□□□□ -0.24
CSDC2-201ENST00000306149 A0A1W2PR77 199 aa13.58□□□□□ -0.24
CSDC2-201ENST00000306149 TTLL8A6PVC2 850 aa13.58□□□□□ -0.24
CSDC2-201ENST00000306149 KRBOX1C9JBD0 128 aa13.58□□□□□ -0.24
CSDC2-201ENST00000306149 TEX30Q5JUR7 227 aa13.58□□□□□ -0.24
CSDC2-201ENST00000306149 CORO6Q6QEF8 472 aa13.58□□□□□ -0.24
CSDC2-201ENST00000306149 GSG1LQ6UXU4 331 aa13.58□□□□□ -0.24
CSDC2-201ENST00000306149 SLC25A44Q96H78 314 aaPredicted RBP13.58□□□□□ -0.24
CSDC2-201ENST00000306149 VN1R1Q9GZP7 353 aa13.58□□□□□ -0.24
CSDC2-201ENST00000306149 ARL6Q9H0F7 186 aa13.58□□□□□ -0.24
CSDC2-201ENST00000306149 ZNF304Q9HCX3 659 aa13.58□□□□□ -0.24
CSDC2-201ENST00000306149 APMAPQ9HDC9 416 aa13.58□□□□□ -0.24
CSDC2-201ENST00000306149 FBXO9Q9UK97 447 aaPredicted RBP13.58□□□□□ -0.24
CSDC2-201ENST00000306149 COL5A1P20908 1838 aaPredicted RBP13.57□□□□□ -0.24
CSDC2-201ENST00000306149 PLPP3O14495 311 aa13.57□□□□□ -0.24
CSDC2-201ENST00000306149 EIF1AYO14602 144 aaKnown RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms