RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 ADGRG3Q86Y34 549 aa11.75□□□□□ -0.53
COL3A1-201ENST00000304636 TMEM231Q9H6L2 316 aa11.75□□□□□ -0.53
COL3A1-201ENST00000304636 KLK11Q9UBX7 282 aa11.75□□□□□ -0.53
COL3A1-201ENST00000304636 EXO1Q9UQ84 846 aaKnown RBP11.75□□□□□ -0.53
COL3A1-201ENST00000304636 URGCP-MRPS24S4R325 110 aa11.75□□□□□ -0.53
COL3A1-201ENST00000304636 CCDC85CA6NKD9 419 aa11.74□□□□□ -0.53
COL3A1-201ENST00000304636 AQP8O94778 261 aa11.74□□□□□ -0.53
COL3A1-201ENST00000304636 FOLR3P41439 243 aa11.74□□□□□ -0.53
COL3A1-201ENST00000304636 TNFRSF4P43489 277 aa11.74□□□□□ -0.53
COL3A1-201ENST00000304636 PSMB3P49720 205 aa11.74□□□□□ -0.53
COL3A1-201ENST00000304636 IKZF1Q13422 519 aa11.74□□□□□ -0.53
COL3A1-201ENST00000304636 ZNF239Q16600 458 aaKnown RBP11.74□□□□□ -0.53
COL3A1-201ENST00000304636 DOK3Q7L591 496 aa11.74□□□□□ -0.53
COL3A1-201ENST00000304636 GRINAQ7Z429 371 aa11.74□□□□□ -0.53
COL3A1-201ENST00000304636 BPHLQ86WA6 291 aaPredicted RBP11.74□□□□□ -0.53
COL3A1-201ENST00000304636 OR4C16Q8NGL9 310 aa11.74□□□□□ -0.53
COL3A1-201ENST00000304636 WDR89Q96FK6 387 aaPredicted RBP11.74□□□□□ -0.53
COL3A1-201ENST00000304636 MARVELD1Q9BSK0 173 aa11.74□□□□□ -0.53
COL3A1-201ENST00000304636 RNF32Q9H0A6 362 aa11.74□□□□□ -0.53
COL3A1-201ENST00000304636 PLEKHM1Q9Y4G2 1056 aa11.74□□□□□ -0.53
COL3A1-201ENST00000304636 NME2P1O60361 137 aa11.74□□□□□ -0.53
COL3A1-201ENST00000304636 SNRPNP63162 240 aaKnown RBP11.74□□□□□ -0.53
COL3A1-201ENST00000304636 CDK5Q00535 292 aa11.74□□□□□ -0.53
COL3A1-201ENST00000304636 H1FNTQ75WM6 255 aaPredicted RBP11.74□□□□□ -0.53
COL3A1-201ENST00000304636 SIRT6Q8N6T7 355 aa11.74□□□□□ -0.53
COL3A1-201ENST00000304636 SEH1LQ96EE3 360 aa11.74□□□□□ -0.53
COL3A1-201ENST00000304636 IFT22Q9H7X7 185 aa11.74□□□□□ -0.53
COL3A1-201ENST00000304636 DOCK2Q92608 1830 aa11.74□□□□□ -0.53
COL3A1-201ENST00000304636 RFPL4AA6NLU0 287 aa11.74□□□□□ -0.53
COL3A1-201ENST00000304636 RFPL4AL1F8VTS6 287 aa11.74□□□□□ -0.53
COL3A1-201ENST00000304636 DCTN6O00399 190 aa11.74□□□□□ -0.53
COL3A1-201ENST00000304636 MAGEB4O15481 346 aaPredicted RBP11.74□□□□□ -0.53
COL3A1-201ENST00000304636 TGOLN2O43493 480 aa11.74□□□□□ -0.53
COL3A1-201ENST00000304636 PHLDA2Q53GA4 152 aa11.74□□□□□ -0.53
COL3A1-201ENST00000304636 ABHD17BQ5VST6 288 aa11.74□□□□□ -0.53
COL3A1-201ENST00000304636 DPPA2Q7Z7J5 298 aa11.74□□□□□ -0.53
COL3A1-201ENST00000304636 GALNT16Q8N428 558 aa11.74□□□□□ -0.53
COL3A1-201ENST00000304636 MYEOVQ96EZ4 313 aa11.74□□□□□ -0.53
COL3A1-201ENST00000304636 PLA2G12AQ9BZM1 189 aa11.74□□□□□ -0.53
COL3A1-201ENST00000304636 THAP10Q9P2Z0 257 aaPredicted RBP11.74□□□□□ -0.53
COL3A1-201ENST00000304636 SLC23A2Q9UGH3 650 aa11.74□□□□□ -0.53
COL3A1-201ENST00000304636 BHLHE40O14503 412 aa11.74□□□□□ -0.53
COL3A1-201ENST00000304636 GNB3P16520 340 aa11.74□□□□□ -0.53
COL3A1-201ENST00000304636 ALOX5APP20292 161 aa11.74□□□□□ -0.53
COL3A1-201ENST00000304636 F2RL1P55085 397 aa11.74□□□□□ -0.53
COL3A1-201ENST00000304636 BAXQ07812 192 aa11.74□□□□□ -0.53
COL3A1-201ENST00000304636 MZT1Q08AG7 82 aa11.74□□□□□ -0.53
COL3A1-201ENST00000304636 MRPL58Q14197 206 aaKnown RBP11.74□□□□□ -0.53
COL3A1-201ENST00000304636 KIAA0040Q15053 153 aa11.74□□□□□ -0.53
COL3A1-201ENST00000304636 TAF9Q16594 264 aa11.74□□□□□ -0.53
COL3A1-201ENST00000304636 FAM74A1Q5RGS3 127 aa11.74□□□□□ -0.53
COL3A1-201ENST00000304636 FAM219BQ5XKK7 198 aa11.74□□□□□ -0.53
COL3A1-201ENST00000304636 TMEM182Q6ZP80 229 aaPredicted RBP11.74□□□□□ -0.53
COL3A1-201ENST00000304636 MARCH3Q86UD3 253 aa11.74□□□□□ -0.53
COL3A1-201ENST00000304636 FAM174AQ8TBP5 190 aa11.74□□□□□ -0.53
COL3A1-201ENST00000304636 ST6GAL2Q96JF0 529 aa11.74□□□□□ -0.53
COL3A1-201ENST00000304636 CDCP1Q9H5V8 836 aa11.74□□□□□ -0.53
COL3A1-201ENST00000304636 NARFLQ9H6Q4 476 aa11.74□□□□□ -0.53
COL3A1-201ENST00000304636 PLEKHA2Q9HB19 425 aa11.74□□□□□ -0.53
COL3A1-201ENST00000304636 TMEM184BQ9Y519 407 aaPredicted RBP11.74□□□□□ -0.53
COL3A1-201ENST00000304636 GCH1P30793 250 aa11.73□□□□□ -0.53
COL3A1-201ENST00000304636 FCGR2CP31995 323 aa11.73□□□□□ -0.53
COL3A1-201ENST00000304636 TMEM81Q6P7N7 255 aa11.73□□□□□ -0.53
COL3A1-201ENST00000304636 OR52B4Q8NGK2 314 aa11.73□□□□□ -0.53
COL3A1-201ENST00000304636 NANPQ8TBE9 248 aa11.73□□□□□ -0.53
COL3A1-201ENST00000304636 PARP12Q9H0J9 701 aaKnown RBP11.73□□□□□ -0.53
COL3A1-201ENST00000304636 NXT1Q9UKK6 140 aaKnown RBP11.73□□□□□ -0.53
COL3A1-201ENST00000304636 GAB2Q9UQC2 676 aa11.73□□□□□ -0.53
COL3A1-201ENST00000304636 PCDHGA5Q9Y5G8 931 aa11.73□□□□□ -0.53
COL3A1-201ENST00000304636 LRP5LA4QPB2 252 aa11.73□□□□□ -0.53
COL3A1-201ENST00000304636 TPPPO94811 219 aa11.73□□□□□ -0.53
COL3A1-201ENST00000304636 HSD17B7P56937 341 aa11.73□□□□□ -0.53
COL3A1-201ENST00000304636 BAMBIQ13145 260 aa11.73□□□□□ -0.53
COL3A1-201ENST00000304636 TMEM88Q6PEY1 159 aa11.73□□□□□ -0.53
COL3A1-201ENST00000304636 PPP1R1CQ8WVI7 109 aa11.73□□□□□ -0.53
COL3A1-201ENST00000304636 BANF2Q9H503 90 aa11.73□□□□□ -0.53
COL3A1-201ENST00000304636 MOB1AQ9H8S9 216 aa11.73□□□□□ -0.53
COL3A1-201ENST00000304636 FN3KRPQ9HA64 309 aa11.73□□□□□ -0.53
COL3A1-201ENST00000304636 LRIT1Q9P2V4 623 aa11.73□□□□□ -0.53
COL3A1-201ENST00000304636 OR14J1Q9UGF5 321 aa11.73□□□□□ -0.53
COL3A1-201ENST00000304636 CYB5R1Q9UHQ9 305 aa11.73□□□□□ -0.53
COL3A1-201ENST00000304636 TRAPPC2LQ9UL33 140 aa11.73□□□□□ -0.53
COL3A1-201ENST00000304636 PADI1Q9ULC6 663 aa11.73□□□□□ -0.53
COL3A1-201ENST00000304636 UPK1AO00322 258 aa11.73□□□□□ -0.53
COL3A1-201ENST00000304636 CTSLP07711 333 aa11.73□□□□□ -0.53
COL3A1-201ENST00000304636 RPL12P30050 165 aaKnown RBP11.73□□□□□ -0.53
COL3A1-201ENST00000304636 HMGA2P52926 109 aa11.73□□□□□ -0.53
COL3A1-201ENST00000304636 WNT3P56703 355 aa11.73□□□□□ -0.53
COL3A1-201ENST00000304636 SCGB2A2Q13296 93 aa11.73□□□□□ -0.53
COL3A1-201ENST00000304636 C8orf82Q6P1X6 216 aaPredicted RBP11.73□□□□□ -0.53
COL3A1-201ENST00000304636 DUSP18Q8NEJ0 188 aa11.73□□□□□ -0.53
COL3A1-201ENST00000304636 DERL3Q96Q80 235 aa11.73□□□□□ -0.53
COL3A1-201ENST00000304636 SPHK1Q9NYA1 384 aa11.73□□□□□ -0.53
COL3A1-201ENST00000304636 A0A087WV62 115 aa11.73□□□□□ -0.53
COL3A1-201ENST00000304636 ANKRD61A6NGH8 418 aa11.73□□□□□ -0.53
COL3A1-201ENST00000304636 ZNF724A8MTY0 619 aa11.73□□□□□ -0.53
COL3A1-201ENST00000304636 TO15178 435 aa11.73□□□□□ -0.53
COL3A1-201ENST00000304636 CLDN1O95832 211 aa11.73□□□□□ -0.53
COL3A1-201ENST00000304636 NKX2-1P43699 371 aaPredicted RBP11.73□□□□□ -0.53
COL3A1-201ENST00000304636 THBS3P49746 956 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms