RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 RGS7BPQ6MZT1 257 aaPredicted RBP13.69□□□□□ -0.22
DDX56-201ENST00000258772 GPR119Q8TDV5 335 aa13.69□□□□□ -0.22
DDX56-201ENST00000258772 RELTQ969Z4 430 aa13.69□□□□□ -0.22
DDX56-201ENST00000258772 TPSD1Q9BZJ3 242 aa13.69□□□□□ -0.22
DDX56-201ENST00000258772 RAB33BQ9H082 229 aa13.69□□□□□ -0.22
DDX56-201ENST00000258772 ARL6Q9H0F7 186 aa13.69□□□□□ -0.22
DDX56-201ENST00000258772 FXYD6Q9H0Q3 95 aa13.69□□□□□ -0.22
DDX56-201ENST00000258772 TAS2R4Q9NYW5 299 aa13.69□□□□□ -0.22
DDX56-201ENST00000258772 C2CD4DB7Z1M9 353 aa13.69□□□□□ -0.22
DDX56-201ENST00000258772 SULT1C2O00338 296 aa13.69□□□□□ -0.22
DDX56-201ENST00000258772 B3GALNT1O75752 331 aa13.69□□□□□ -0.22
DDX56-201ENST00000258772 MELTFP08582 738 aa13.69□□□□□ -0.22
DDX56-201ENST00000258772 NMBP08949 121 aa13.69□□□□□ -0.22
DDX56-201ENST00000258772 GABRA1P14867 456 aa13.69□□□□□ -0.22
DDX56-201ENST00000258772 TAS2R19P59542 299 aa13.69□□□□□ -0.22
DDX56-201ENST00000258772 MELKQ14680 651 aa13.69□□□□□ -0.22
DDX56-201ENST00000258772 C4orf46Q504U0 113 aa13.69□□□□□ -0.22
DDX56-201ENST00000258772 TSSK4Q6SA08 328 aa13.69□□□□□ -0.22
DDX56-201ENST00000258772 SMRP1Q8NCR6 262 aa13.69□□□□□ -0.22
DDX56-201ENST00000258772 SLC25A44Q96H78 314 aaPredicted RBP13.69□□□□□ -0.22
DDX56-201ENST00000258772 ZNF587Q96SQ5 575 aaPredicted RBP13.69□□□□□ -0.22
DDX56-201ENST00000258772 C1QTNF6Q9BXI9 259 aa13.69□□□□□ -0.22
DDX56-201ENST00000258772 OR11A1Q9GZK7 315 aa13.69□□□□□ -0.22
DDX56-201ENST00000258772 PRMT8Q9NR22 394 aaPredicted RBP13.69□□□□□ -0.22
DDX56-201ENST00000258772 SLC2A4RGQ9NR83 387 aa13.69□□□□□ -0.22
DDX56-201ENST00000258772 MED9Q9NWA0 146 aa13.69□□□□□ -0.22
DDX56-201ENST00000258772 SDHAF2Q9NX18 166 aa13.69□□□□□ -0.22
DDX56-201ENST00000258772 COA3Q9Y2R0 106 aaPredicted RBP13.69□□□□□ -0.22
DDX56-201ENST00000258772 MRPS18BQ9Y676 258 aaKnown RBP13.69□□□□□ -0.22
DDX56-201ENST00000258772 ASXL3Q9C0F0 2248 aa13.69□□□□□ -0.22
DDX56-201ENST00000258772 A0A1W2PR77 199 aa13.68□□□□□ -0.22
DDX56-201ENST00000258772 MPZL1O95297 269 aa13.68□□□□□ -0.22
DDX56-201ENST00000258772 IGHMP01871 453 aa13.68□□□□□ -0.22
DDX56-201ENST00000258772 GLULP15104 373 aa13.68□□□□□ -0.22
DDX56-201ENST00000258772 PPP3CBP16298 524 aa13.68□□□□□ -0.22
DDX56-201ENST00000258772 FSTP19883 344 aa13.68□□□□□ -0.22
DDX56-201ENST00000258772 CALCRP30988 508 aa13.68□□□□□ -0.22
DDX56-201ENST00000258772 GLO1Q04760 184 aa13.68□□□□□ -0.22
DDX56-201ENST00000258772 ALKAL2Q6UX46 152 aa13.68□□□□□ -0.22
DDX56-201ENST00000258772 SLC29A4Q7RTT9 530 aa13.68□□□□□ -0.22
DDX56-201ENST00000258772 GRINAQ7Z429 371 aa13.68□□□□□ -0.22
DDX56-201ENST00000258772 PRSS58Q8IYP2 241 aa13.68□□□□□ -0.22
DDX56-201ENST00000258772 ZNF454Q8N9F8 522 aa13.68□□□□□ -0.22
DDX56-201ENST00000258772 OR1N1Q8NGS0 311 aa13.68□□□□□ -0.22
DDX56-201ENST00000258772 SCARB1Q8WTV0 552 aa13.68□□□□□ -0.22
DDX56-201ENST00000258772 SLC41A2Q96JW4 573 aa13.68□□□□□ -0.22
DDX56-201ENST00000258772 C1orf198Q9H425 327 aa13.68□□□□□ -0.22
DDX56-201ENST00000258772 KCNMB2Q9Y691 235 aa13.68□□□□□ -0.22
DDX56-201ENST00000258772 IGHV1OR15-9A0A0B4J2B8 117 aa13.68□□□□□ -0.22
DDX56-201ENST00000258772 MFSD2BA6NFX1 497 aa13.68□□□□□ -0.22
DDX56-201ENST00000258772 FADS1O60427 444 aa13.68□□□□□ -0.22
DDX56-201ENST00000258772 RAB3DO95716 219 aa13.68□□□□□ -0.22
DDX56-201ENST00000258772 LPLP06858 475 aa13.68□□□□□ -0.22
DDX56-201ENST00000258772 CRABP1P29762 137 aa13.68□□□□□ -0.22
DDX56-201ENST00000258772 GMFBP60983 142 aa13.68□□□□□ -0.22
DDX56-201ENST00000258772 C11orf88Q6PI97 169 aa13.68□□□□□ -0.22
DDX56-201ENST00000258772 ZNF627Q7L945 461 aa13.68□□□□□ -0.22
DDX56-201ENST00000258772 KDM8Q8N371 416 aa13.68□□□□□ -0.22
DDX56-201ENST00000258772 TMEM229BQ8NBD8 167 aa13.68□□□□□ -0.22
DDX56-201ENST00000258772 OR52N5Q8NH56 324 aa13.68□□□□□ -0.22
DDX56-201ENST00000258772 COQ8AQ8NI60 647 aa13.68□□□□□ -0.22
DDX56-201ENST00000258772 DUSP19Q8WTR2 217 aa13.68□□□□□ -0.22
DDX56-201ENST00000258772 GAL3ST1Q99999 423 aa13.68□□□□□ -0.22
DDX56-201ENST00000258772 POFUT1Q9H488 388 aa13.68□□□□□ -0.22
DDX56-201ENST00000258772 COQ3Q9NZJ6 369 aa13.68□□□□□ -0.22
DDX56-201ENST00000258772 MED11Q9P086 117 aa13.68□□□□□ -0.22
DDX56-201ENST00000258772 UPB1Q9UBR1 384 aa13.68□□□□□ -0.22
DDX56-201ENST00000258772 COPS7AQ9UBW8 275 aa13.68□□□□□ -0.22
DDX56-201ENST00000258772 CGGBP1Q9UFW8 167 aaPredicted RBP13.68□□□□□ -0.22
DDX56-201ENST00000258772 DCDC2BA2VCK2 349 aa13.67□□□□□ -0.22
DDX56-201ENST00000258772 SRSF10O75494 262 aaKnown RBP13.67□□□□□ -0.22
DDX56-201ENST00000258772 HLA-DOBP13765 273 aa13.67□□□□□ -0.22
DDX56-201ENST00000258772 HSD11B2P80365 405 aa13.67□□□□□ -0.22
DDX56-201ENST00000258772 TMEM205Q6UW68 189 aa13.67□□□□□ -0.22
DDX56-201ENST00000258772 SYT13Q7L8C5 426 aa13.67□□□□□ -0.22
DDX56-201ENST00000258772 NAXDQ8IW45 347 aa13.67□□□□□ -0.22
DDX56-201ENST00000258772 ZNF441Q8N8Z8 693 aa13.67□□□□□ -0.22
DDX56-201ENST00000258772 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.67□□□□□ -0.22
DDX56-201ENST00000258772 GALNT11Q8NCW6 608 aa13.67□□□□□ -0.22
DDX56-201ENST00000258772 OR51A2Q8NGJ7 313 aa13.67□□□□□ -0.22
DDX56-201ENST00000258772 OR6M1Q8NGM8 313 aa13.67□□□□□ -0.22
DDX56-201ENST00000258772 OR1L3Q8NH93 324 aa13.67□□□□□ -0.22
DDX56-201ENST00000258772 STK35Q8TDR2 534 aa13.67□□□□□ -0.22
DDX56-201ENST00000258772 CXorf58Q96LI9 332 aa13.67□□□□□ -0.22
DDX56-201ENST00000258772 POTEKPQ9BYX7 375 aa13.67□□□□□ -0.22
DDX56-201ENST00000258772 SCPEP1Q9HB40 452 aa13.67□□□□□ -0.22
DDX56-201ENST00000258772 ZNF304Q9HCX3 659 aa13.67□□□□□ -0.22
DDX56-201ENST00000258772 EMC9Q9Y3B6 208 aa13.67□□□□□ -0.22
DDX56-201ENST00000258772 R4GMQ9 66 aa13.67□□□□□ -0.22
DDX56-201ENST00000258772 FER1L5A0AVI2 2057 aa13.67□□□□□ -0.22
DDX56-201ENST00000258772 MEGF11A6BM72 1044 aa13.67□□□□□ -0.22
DDX56-201ENST00000258772 RHPN2P1A8MT19 583 aa13.67□□□□□ -0.22
DDX56-201ENST00000258772 SOX1O00570 391 aaPredicted RBP13.67□□□□□ -0.22
DDX56-201ENST00000258772 OR2T1O43869 369 aa13.67□□□□□ -0.22
DDX56-201ENST00000258772 AHSA1O95433 338 aa13.67□□□□□ -0.22
DDX56-201ENST00000258772 PMS2P2O95744 297 aa13.67□□□□□ -0.22
DDX56-201ENST00000258772 OR4E1P0C645 316 aa13.67□□□□□ -0.22
DDX56-201ENST00000258772 CD27P26842 260 aa13.67□□□□□ -0.22
DDX56-201ENST00000258772 GSG1LQ6UXU4 331 aa13.67□□□□□ -0.22
DDX56-201ENST00000258772 PRSS42Q7Z5A4 293 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms