RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 TMEFF2Q9UIK5 374 aaPredicted RBP7.02□□□□□ -1.29
GPNMB-201ENST00000258733 FAM96BQ9Y3D0 163 aa7.02□□□□□ -1.29
GPNMB-201ENST00000258733 EP400Q96L91 3159 aa7.02□□□□□ -1.29
GPNMB-201ENST00000258733 WIPF3A6NGB9 483 aa7.02□□□□□ -1.29
GPNMB-201ENST00000258733 GNGT2O14610 69 aa7.02□□□□□ -1.29
GPNMB-201ENST00000258733 GPR75O95800 540 aa7.02□□□□□ -1.29
GPNMB-201ENST00000258733 SEMG1P04279 462 aa7.02□□□□□ -1.29
GPNMB-201ENST00000258733 PSG1P11464 419 aa7.02□□□□□ -1.29
GPNMB-201ENST00000258733 ITGB7P26010 798 aa7.02□□□□□ -1.29
GPNMB-201ENST00000258733 TM4SF1P30408 202 aa7.02□□□□□ -1.29
GPNMB-201ENST00000258733 SSTR5P35346 364 aa7.02□□□□□ -1.29
GPNMB-201ENST00000258733 PSMA6P60900 246 aaKnown RBP7.02□□□□□ -1.29
GPNMB-201ENST00000258733 MAMLD1Q13495 774 aa7.02□□□□□ -1.29
GPNMB-201ENST00000258733 ZNF460Q14592 562 aa7.02□□□□□ -1.29
GPNMB-201ENST00000258733 HMGN3Q15651 99 aa7.02□□□□□ -1.29
GPNMB-201ENST00000258733 SSX1Q16384 188 aa7.02□□□□□ -1.29
GPNMB-201ENST00000258733 RABL3Q5HYI8 236 aa7.02□□□□□ -1.29
GPNMB-201ENST00000258733 SPANXN3Q5MJ09 141 aa7.02□□□□□ -1.29
GPNMB-201ENST00000258733 FBXW12Q6X9E4 464 aa7.02□□□□□ -1.29
GPNMB-201ENST00000258733 ASCL4Q6XD76 172 aa7.02□□□□□ -1.29
GPNMB-201ENST00000258733 GDF7Q7Z4P5 450 aa7.02□□□□□ -1.29
GPNMB-201ENST00000258733 PELI3Q8N2H9 469 aa7.02□□□□□ -1.29
GPNMB-201ENST00000258733 OR1J2Q8NGS2 313 aa7.02□□□□□ -1.29
GPNMB-201ENST00000258733 LRRC15Q8TF66 581 aa7.02□□□□□ -1.29
GPNMB-201ENST00000258733 ASB13Q8WXK3 278 aa7.02□□□□□ -1.29
GPNMB-201ENST00000258733 LYSMD1Q96S90 227 aa7.02□□□□□ -1.29
GPNMB-201ENST00000258733 SSBP4Q9BWG4 385 aaPredicted RBP7.02□□□□□ -1.29
GPNMB-201ENST00000258733 BEX1Q9HBH7 125 aa7.02□□□□□ -1.29
GPNMB-201ENST00000258733 CA10Q9NS85 328 aa7.02□□□□□ -1.29
GPNMB-201ENST00000258733 ERRFI1Q9UJM3 462 aaPredicted RBP7.02□□□□□ -1.29
GPNMB-201ENST00000258733 FARSAQ9Y285 508 aaKnown RBP7.02□□□□□ -1.29
GPNMB-201ENST00000258733 POLR3KQ9Y2Y1 108 aaPredicted RBP7.02□□□□□ -1.29
GPNMB-201ENST00000258733 ZNF337Q9Y3M9 751 aa7.02□□□□□ -1.29
GPNMB-201ENST00000258733 SNX10Q9Y5X0 201 aa7.02□□□□□ -1.29
GPNMB-201ENST00000258733 KPTNQ9Y664 436 aa7.02□□□□□ -1.29
GPNMB-201ENST00000258733 ARL5AQ9Y689 179 aa7.02□□□□□ -1.29
GPNMB-201ENST00000258733 COL5A2P05997 1499 aaPredicted RBP7.02□□□□□ -1.29
GPNMB-201ENST00000258733 HS3ST1O14792 307 aa7.01□□□□□ -1.29
GPNMB-201ENST00000258733 FGF16O43320 207 aa7.01□□□□□ -1.29
GPNMB-201ENST00000258733 CTSBP07858 339 aa7.01□□□□□ -1.29
GPNMB-201ENST00000258733 CD14P08571 375 aa7.01□□□□□ -1.29
GPNMB-201ENST00000258733 PRKACGP22612 351 aa7.01□□□□□ -1.29
GPNMB-201ENST00000258733 DVL1P1P54792 670 aaPredicted RBP7.01□□□□□ -1.29
GPNMB-201ENST00000258733 PCBP4P57723 403 aaKnown RBP7.01□□□□□ -1.29
GPNMB-201ENST00000258733 UBE2KP61086 200 aa7.01□□□□□ -1.29
GPNMB-201ENST00000258733 TBPL1P62380 186 aa7.01□□□□□ -1.29
GPNMB-201ENST00000258733 IL13RA1P78552 427 aa7.01□□□□□ -1.29
GPNMB-201ENST00000258733 CACNA1SQ13698 1873 aa7.01□□□□□ -1.29
GPNMB-201ENST00000258733 CST9Q5W186 159 aa7.01□□□□□ -1.29
GPNMB-201ENST00000258733 WDR25Q64LD2 544 aaPredicted RBP7.01□□□□□ -1.29
GPNMB-201ENST00000258733 Q6ZTK2 550 aa7.01□□□□□ -1.29
GPNMB-201ENST00000258733 DEFB128Q7Z7B8 93 aa7.01□□□□□ -1.29
GPNMB-201ENST00000258733 FSTL5Q8N475 847 aaPredicted RBP7.01□□□□□ -1.29
GPNMB-201ENST00000258733 FRMD1Q8N878 549 aa7.01□□□□□ -1.29
GPNMB-201ENST00000258733 MDGA1Q8NFP4 955 aa7.01□□□□□ -1.29
GPNMB-201ENST00000258733 TNFAIP8L1Q8WVP5 186 aa7.01□□□□□ -1.29
GPNMB-201ENST00000258733 TSLPQ969D9 159 aa7.01□□□□□ -1.29
GPNMB-201ENST00000258733 GUCD1Q96NT3 240 aa7.01□□□□□ -1.29
GPNMB-201ENST00000258733 MRPL57Q9BQC6 102 aaKnown RBP7.01□□□□□ -1.29
GPNMB-201ENST00000258733 TAPBPLQ9BX59 468 aa7.01□□□□□ -1.29
GPNMB-201ENST00000258733 PSG8Q9UQ74 426 aa7.01□□□□□ -1.29
GPNMB-201ENST00000258733 UFC1Q9Y3C8 167 aa7.01□□□□□ -1.29
GPNMB-201ENST00000258733 SRCAPQ6ZRS2 3230 aa7.01□□□□□ -1.29
GPNMB-201ENST00000258733 A0A087X1B8 175 aa7.01□□□□□ -1.29
GPNMB-201ENST00000258733 WDR27A2RRH5 827 aa7.01□□□□□ -1.29
GPNMB-201ENST00000258733 MFNGO00587 321 aa7.01□□□□□ -1.29
GPNMB-201ENST00000258733 ZNF208O43345 1280 aa7.01□□□□□ -1.29
GPNMB-201ENST00000258733 PRAF2O60831 178 aa7.01□□□□□ -1.29
GPNMB-201ENST00000258733 TNFRSF6BO95407 300 aa7.01□□□□□ -1.29
GPNMB-201ENST00000258733 CST1P01037 141 aa7.01□□□□□ -1.29
GPNMB-201ENST00000258733 HLA-DOAP06340 250 aa7.01□□□□□ -1.29
GPNMB-201ENST00000258733 DCNP07585 359 aaKnown RBP7.01□□□□□ -1.29
GPNMB-201ENST00000258733 PSMA1P25786 263 aaKnown RBP7.01□□□□□ -1.29
GPNMB-201ENST00000258733 BDKRB1P46663 353 aa7.01□□□□□ -1.29
GPNMB-201ENST00000258733 GSK3BP49841 420 aa7.01□□□□□ -1.29
GPNMB-201ENST00000258733 ZNF543Q08ER8 600 aa7.01□□□□□ -1.29
GPNMB-201ENST00000258733 SRSF6Q13247 344 aaKnown RBP7.01□□□□□ -1.29
GPNMB-201ENST00000258733 AWAT2Q6E213 333 aa7.01□□□□□ -1.29
GPNMB-201ENST00000258733 PRSS54Q6PEW0 395 aa7.01□□□□□ -1.29
GPNMB-201ENST00000258733 CD300LDQ6UXZ3 194 aa7.01□□□□□ -1.29
GPNMB-201ENST00000258733 CLEC20AQ6ZU45 233 aa7.01□□□□□ -1.29
GPNMB-201ENST00000258733 TMEM183AQ8IXX5 376 aa7.01□□□□□ -1.29
GPNMB-201ENST00000258733 OR8I2Q8N0Y5 310 aa7.01□□□□□ -1.29
GPNMB-201ENST00000258733 LENG9Q96B70 501 aa7.01□□□□□ -1.29
GPNMB-201ENST00000258733 YPEL4Q96NS1 127 aa7.01□□□□□ -1.29
GPNMB-201ENST00000258733 CIB3Q96Q77 187 aaPredicted RBP7.01□□□□□ -1.29
GPNMB-201ENST00000258733 INSM2Q96T92 566 aaPredicted RBP7.01□□□□□ -1.29
GPNMB-201ENST00000258733 EPYCQ99645 322 aa7.01□□□□□ -1.29
GPNMB-201ENST00000258733 C20orf144Q9BQM9 153 aa7.01□□□□□ -1.29
GPNMB-201ENST00000258733 ZBP1Q9H171 429 aa7.01□□□□□ -1.29
GPNMB-201ENST00000258733 C1orf198Q9H425 327 aa7.01□□□□□ -1.29
GPNMB-201ENST00000258733 MEAF6Q9HAF1 191 aa7.01□□□□□ -1.29
GPNMB-201ENST00000258733 CLN8Q9UBY8 286 aa7.01□□□□□ -1.29
GPNMB-201ENST00000258733 PPIAL4AQ9Y536 164 aa7.01□□□□□ -1.29
GPNMB-201ENST00000258733 PIKFYVEQ9Y2I7 2098 aa7.01□□□□□ -1.29
GPNMB-201ENST00000258733 A0A1B0GU03 582 aa7□□□□□ -1.29
GPNMB-201ENST00000258733 BBIP1A8MTZ0 92 aa7□□□□□ -1.29
GPNMB-201ENST00000258733 ITGB2P05107 769 aa7□□□□□ -1.29
GPNMB-201ENST00000258733 CTSDP07339 412 aaPredicted RBP7□□□□□ -1.29
GPNMB-201ENST00000258733 CHRM2P08172 466 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms