RNA–Protein interactions for RNA: ENST00000254231.4

LIN28A-201, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 3,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-201ENST00000254231 SNRPBP14678 240 aaKnown RBP10.36□□□□□ -0.75
LIN28A-201ENST00000254231 NBL1P41271 181 aa10.36□□□□□ -0.75
LIN28A-201ENST00000254231 NANOS3P60323 173 aaKnown RBP10.36□□□□□ -0.75
LIN28A-201ENST00000254231 TEKQ02763 1124 aa10.36□□□□□ -0.75
LIN28A-201ENST00000254231 CLN3Q13286 438 aa10.36□□□□□ -0.75
LIN28A-201ENST00000254231 FHL1Q13642 323 aa10.36□□□□□ -0.75
LIN28A-201ENST00000254231 SPANXN2Q5MJ10 180 aa10.36□□□□□ -0.75
LIN28A-201ENST00000254231 FCRLAQ7L513 359 aa10.36□□□□□ -0.75
LIN28A-201ENST00000254231 CROCCP3Q8IVE0 287 aa10.36□□□□□ -0.75
LIN28A-201ENST00000254231 POC5Q8NA72 575 aa10.36□□□□□ -0.75
LIN28A-201ENST00000254231 MCHR2Q969V1 340 aa10.36□□□□□ -0.75
LIN28A-201ENST00000254231 FAM173AQ9BQD7 235 aa10.36□□□□□ -0.75
LIN28A-201ENST00000254231 TMEM43Q9BTV4 400 aa10.36□□□□□ -0.75
LIN28A-201ENST00000254231 HDHD2Q9H0R4 259 aa10.36□□□□□ -0.75
LIN28A-201ENST00000254231 TCF7L1Q9HCS4 588 aa10.36□□□□□ -0.75
LIN28A-201ENST00000254231 NOX4Q9NPH5 578 aa10.36□□□□□ -0.75
LIN28A-201ENST00000254231 CGGBP1Q9UFW8 167 aaPredicted RBP10.36□□□□□ -0.75
LIN28A-201ENST00000254231 PCDHGB7Q9Y5F8 929 aa10.36□□□□□ -0.75
LIN28A-201ENST00000254231 USP24Q9UPU5 2620 aa10.36□□□□□ -0.75
LIN28A-201ENST00000254231 A0A1W2PQ72 361 aa10.35□□□□□ -0.75
LIN28A-201ENST00000254231 ZFPL1O95159 310 aa10.35□□□□□ -0.75
LIN28A-201ENST00000254231 TTKP33981 857 aa10.35□□□□□ -0.75
LIN28A-201ENST00000254231 SCN1BQ07699 218 aa10.35□□□□□ -0.75
LIN28A-201ENST00000254231 PHYHD1Q5SRE7 291 aa10.35□□□□□ -0.75
LIN28A-201ENST00000254231 LCN1P1Q5VSP4 162 aa10.35□□□□□ -0.75
LIN28A-201ENST00000254231 ZNF813Q6ZN06 617 aa10.35□□□□□ -0.75
LIN28A-201ENST00000254231 ZNF367Q7RTV3 350 aa10.35□□□□□ -0.75
LIN28A-201ENST00000254231 SLC26A10Q8NG04 563 aa10.35□□□□□ -0.75
LIN28A-201ENST00000254231 ANGPTL4Q9BY76 406 aa10.35□□□□□ -0.75
LIN28A-201ENST00000254231 TREM2Q9NZC2 230 aa10.35□□□□□ -0.75
LIN28A-201ENST00000254231 ARRDC5A6NEK1 342 aa10.35□□□□□ -0.75
LIN28A-201ENST00000254231 PDGFAP04085 211 aa10.35□□□□□ -0.75
LIN28A-201ENST00000254231 LCATP04180 440 aa10.35□□□□□ -0.75
LIN28A-201ENST00000254231 FAM157BP0CG42 384 aa10.35□□□□□ -0.75
LIN28A-201ENST00000254231 CNR1P21554 472 aa10.35□□□□□ -0.75
LIN28A-201ENST00000254231 MYL9P24844 172 aa10.35□□□□□ -0.75
LIN28A-201ENST00000254231 EIF1P41567 113 aaKnown RBP10.35□□□□□ -0.75
LIN28A-201ENST00000254231 TPTEP56180 551 aa10.35□□□□□ -0.75
LIN28A-201ENST00000254231 SLC35A1P78382 337 aa10.35□□□□□ -0.75
LIN28A-201ENST00000254231 CDC20Q12834 499 aa10.35□□□□□ -0.75
LIN28A-201ENST00000254231 P2RY14Q15391 338 aa10.35□□□□□ -0.75
LIN28A-201ENST00000254231 BOLLQ8N9W6 283 aaKnown RBP10.35□□□□□ -0.75
LIN28A-201ENST00000254231 FAM71CQ8NEG0 241 aa10.35□□□□□ -0.75
LIN28A-201ENST00000254231 DERL3Q96Q80 235 aa10.35□□□□□ -0.75
LIN28A-201ENST00000254231 ZNF426Q9BUY5 554 aa10.35□□□□□ -0.75
LIN28A-201ENST00000254231 B3GNT4Q9C0J1 378 aa10.35□□□□□ -0.75
LIN28A-201ENST00000254231 PLEKHA1Q9HB21 404 aa10.35□□□□□ -0.75
LIN28A-201ENST00000254231 CNOT2Q9NZN8 540 aaKnown RBP10.35□□□□□ -0.75
LIN28A-201ENST00000254231 A0A1W2PQD3 144 aa10.35□□□□□ -0.75
LIN28A-201ENST00000254231 LRRC3CA6NJW4 275 aa10.35□□□□□ -0.75
LIN28A-201ENST00000254231 HPGDSO60760 199 aa10.35□□□□□ -0.75
LIN28A-201ENST00000254231 TGFBR2P37173 567 aa10.35□□□□□ -0.75
LIN28A-201ENST00000254231 POU4F3Q15319 338 aa10.35□□□□□ -0.75
LIN28A-201ENST00000254231 ZNF404Q494X3 552 aa10.35□□□□□ -0.75
LIN28A-201ENST00000254231 EXOSC6Q5RKV6 272 aaKnown RBP10.35□□□□□ -0.75
LIN28A-201ENST00000254231 ZNF57Q68EA5 555 aaPredicted RBP10.35□□□□□ -0.75
LIN28A-201ENST00000254231 VASH1Q7L8A9 365 aaPredicted RBP10.35□□□□□ -0.75
LIN28A-201ENST00000254231 OR5AS1Q8N127 324 aa10.35□□□□□ -0.75
LIN28A-201ENST00000254231 ZADH2Q8N4Q0 377 aa10.35□□□□□ -0.75
LIN28A-201ENST00000254231 UXS1Q8NBZ7 420 aa10.35□□□□□ -0.75
LIN28A-201ENST00000254231 OR5AK2Q8NH90 309 aa10.35□□□□□ -0.75
LIN28A-201ENST00000254231 HSPB6O14558 160 aa10.34□□□□□ -0.75
LIN28A-201ENST00000254231 DPM1O60762 260 aa10.34□□□□□ -0.75
LIN28A-201ENST00000254231 TGM6O95932 706 aa10.34□□□□□ -0.75
LIN28A-201ENST00000254231 HLA-DPB1P04440 258 aa10.34□□□□□ -0.75
LIN28A-201ENST00000254231 SCG5P05408 212 aa10.34□□□□□ -0.75
LIN28A-201ENST00000254231 DAP3P51398 398 aaKnown RBP10.34□□□□□ -0.75
LIN28A-201ENST00000254231 CSNK2A1P68400 391 aaPredicted RBP10.34□□□□□ -0.75
LIN28A-201ENST00000254231 MRPS15P82914 257 aaKnown RBP10.34□□□□□ -0.75
LIN28A-201ENST00000254231 MFSD13AQ14CX5 517 aa10.34□□□□□ -0.75
LIN28A-201ENST00000254231 SLC25A35Q3KQZ1 300 aa10.34□□□□□ -0.75
LIN28A-201ENST00000254231 TIMM50Q3ZCQ8 353 aa10.34□□□□□ -0.75
LIN28A-201ENST00000254231 KBTBD8Q8NFY9 601 aa10.34□□□□□ -0.75
LIN28A-201ENST00000254231 ABHD4Q8TB40 342 aa10.34□□□□□ -0.75
LIN28A-201ENST00000254231 KISS1RQ969F8 398 aaPredicted RBP10.34□□□□□ -0.75
LIN28A-201ENST00000254231 ZNF416Q9BWM5 594 aa10.34□□□□□ -0.75
LIN28A-201ENST00000254231 EXOSC3Q9NQT5 275 aaKnown RBP10.34□□□□□ -0.75
LIN28A-201ENST00000254231 SHISA3A0PJX4 238 aa10.34□□□□□ -0.75
LIN28A-201ENST00000254231 RRP8O43159 456 aaKnown RBP10.34□□□□□ -0.75
LIN28A-201ENST00000254231 AGFG2O95081 481 aa10.34□□□□□ -0.75
LIN28A-201ENST00000254231 PNPP00491 289 aa10.34□□□□□ -0.75
LIN28A-201ENST00000254231 MSX1P28360 303 aa10.34□□□□□ -0.75
LIN28A-201ENST00000254231 NTF4P34130 210 aa10.34□□□□□ -0.75
LIN28A-201ENST00000254231 SLC18B1Q6NT16 456 aa10.34□□□□□ -0.75
LIN28A-201ENST00000254231 ANKRD16Q6P6B7 361 aa10.34□□□□□ -0.75
LIN28A-201ENST00000254231 CD300LDQ6UXZ3 194 aa10.34□□□□□ -0.75
LIN28A-201ENST00000254231 LINC00114Q6XXX2 140 aa10.34□□□□□ -0.75
LIN28A-201ENST00000254231 SLC22A16Q86VW1 577 aa10.34□□□□□ -0.75
LIN28A-201ENST00000254231 MFSD8Q8NHS3 518 aa10.34□□□□□ -0.75
LIN28A-201ENST00000254231 C9orf43Q8TAL5 461 aaPredicted RBP10.34□□□□□ -0.75
LIN28A-201ENST00000254231 KLHL21Q9UJP4 597 aa10.34□□□□□ -0.75
LIN28A-201ENST00000254231 MCTS1Q9ULC4 181 aaKnown RBP10.34□□□□□ -0.75
LIN28A-201ENST00000254231 RASD1Q9Y272 281 aa10.34□□□□□ -0.75
LIN28A-201ENST00000254231 ANXA2P2A6NMY6 339 aa10.34□□□□□ -0.75
LIN28A-201ENST00000254231 ATXN7O15265 892 aaPredicted RBP10.34□□□□□ -0.75
LIN28A-201ENST00000254231 KHDRBS3O75525 346 aaKnown RBP10.34□□□□□ -0.75
LIN28A-201ENST00000254231 NAGAP17050 411 aa10.34□□□□□ -0.75
LIN28A-201ENST00000254231 ENDOUP21128 410 aaKnown RBP10.34□□□□□ -0.75
LIN28A-201ENST00000254231 GAS1P54826 345 aa10.34□□□□□ -0.75
LIN28A-201ENST00000254231 TMBIM6P55061 237 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms