RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 FKRPQ9H9S5 495 aa3.76□□□□□ -1.81
UBE4A-201ENST00000252108 CHMP1AQ9HD42 196 aaPredicted RBP3.76□□□□□ -1.81
UBE4A-201ENST00000252108 DZANK1Q9NVP4 752 aa3.76□□□□□ -1.81
UBE4A-201ENST00000252108 KIR2DS5A0A0G2JLQ3 304 aa3.76□□□□□ -1.81
UBE4A-201ENST00000252108 A0A0G2JNG1 304 aa3.76□□□□□ -1.81
UBE4A-201ENST00000252108 A0A1W2PPK0 400 aa3.76□□□□□ -1.81
UBE4A-201ENST00000252108 OR2M5A3KFT3 312 aa3.76□□□□□ -1.81
UBE4A-201ENST00000252108 OR6C74A6NCV1 312 aa3.76□□□□□ -1.81
UBE4A-201ENST00000252108 KIR2DS3K7RE56 304 aa3.76□□□□□ -1.81
UBE4A-201ENST00000252108 TNFRSF10CO14798 259 aa3.76□□□□□ -1.81
UBE4A-201ENST00000252108 CTSVO60911 334 aa3.76□□□□□ -1.81
UBE4A-201ENST00000252108 HRGP04196 525 aa3.76□□□□□ -1.81
UBE4A-201ENST00000252108 DCNP07585 359 aaKnown RBP3.76□□□□□ -1.81
UBE4A-201ENST00000252108 MYOGP15173 224 aa3.76□□□□□ -1.81
UBE4A-201ENST00000252108 PGAM2P15259 253 aa3.76□□□□□ -1.81
UBE4A-201ENST00000252108 MST1P26927 711 aa3.76□□□□□ -1.81
UBE4A-201ENST00000252108 PSMB6P28072 239 aa3.76□□□□□ -1.81
UBE4A-201ENST00000252108 CCKBRP32239 447 aa3.76□□□□□ -1.81
UBE4A-201ENST00000252108 ID4P47928 161 aa3.76□□□□□ -1.81
UBE4A-201ENST00000252108 POU3F4P49335 361 aa3.76□□□□□ -1.81
UBE4A-201ENST00000252108 AGFG1P52594 562 aaKnown RBP3.76□□□□□ -1.81
UBE4A-201ENST00000252108 ARFRP1Q13795 201 aa3.76□□□□□ -1.81
UBE4A-201ENST00000252108 KIR2DS5Q14953 304 aa3.76□□□□□ -1.81
UBE4A-201ENST00000252108 ELOCQ15369 112 aa3.76□□□□□ -1.81
UBE4A-201ENST00000252108 CSRP2Q16527 193 aa3.76□□□□□ -1.81
UBE4A-201ENST00000252108 PNLIPRP3Q17RR3 467 aa3.76□□□□□ -1.81
UBE4A-201ENST00000252108 DEFB134Q4QY38 66 aa3.76□□□□□ -1.81
UBE4A-201ENST00000252108 DEGS2Q6QHC5 323 aa3.76□□□□□ -1.81
UBE4A-201ENST00000252108 C15orf54Q8N8G6 183 aa3.76□□□□□ -1.81
UBE4A-201ENST00000252108 SLC16A11Q8NCK7 471 aa3.76□□□□□ -1.81
UBE4A-201ENST00000252108 RCBTB1Q8NDN9 531 aa3.76□□□□□ -1.81
UBE4A-201ENST00000252108 OR5H2Q8NGV7 314 aa3.76□□□□□ -1.81
UBE4A-201ENST00000252108 TMEM106AQ96A25 262 aa3.76□□□□□ -1.81
UBE4A-201ENST00000252108 BTF3L4Q96K17 158 aa3.76□□□□□ -1.81
UBE4A-201ENST00000252108 LINC00052Q96N35 136 aa3.76□□□□□ -1.81
UBE4A-201ENST00000252108 NECTIN4Q96NY8 510 aa3.76□□□□□ -1.81
UBE4A-201ENST00000252108 SPIN2AQ99865 258 aa3.76□□□□□ -1.81
UBE4A-201ENST00000252108 SPIN2BQ9BPZ2 258 aa3.76□□□□□ -1.81
UBE4A-201ENST00000252108 NUDT16L1Q9BRJ7 211 aaKnown RBP3.76□□□□□ -1.81
UBE4A-201ENST00000252108 SEC11CQ9BY50 192 aa3.76□□□□□ -1.81
UBE4A-201ENST00000252108 ELL3Q9HB65 397 aaPredicted RBP3.76□□□□□ -1.81
UBE4A-201ENST00000252108 SDHAF3Q9NRP4 125 aa3.76□□□□□ -1.81
UBE4A-201ENST00000252108 SERINC1Q9NRX5 453 aa3.76□□□□□ -1.81
UBE4A-201ENST00000252108 POT1Q9NUX5 634 aa3.76□□□□□ -1.81
UBE4A-201ENST00000252108 GHRLQ9UBU3 117 aa3.76□□□□□ -1.81
UBE4A-201ENST00000252108 KCNK6Q9Y257 313 aa3.76□□□□□ -1.81
UBE4A-201ENST00000252108 PLEKHM1Q9Y4G2 1056 aa3.76□□□□□ -1.81
UBE4A-201ENST00000252108 HEATR5AQ86XA9 2040 aa3.76□□□□□ -1.81
UBE4A-201ENST00000252108 NPIPA5E9PKD4 350 aa3.76□□□□□ -1.81
UBE4A-201ENST00000252108 JTBO76095 146 aa3.76□□□□□ -1.81
UBE4A-201ENST00000252108 GSTP1P09211 210 aaKnown RBP3.76□□□□□ -1.81
UBE4A-201ENST00000252108 H2BFMP0C1H6 154 aa3.76□□□□□ -1.81
UBE4A-201ENST00000252108 CSF2RBP32927 897 aa3.76□□□□□ -1.81
UBE4A-201ENST00000252108 LTBRP36941 435 aa3.76□□□□□ -1.81
UBE4A-201ENST00000252108 ACTR1BP42025 376 aa3.76□□□□□ -1.81
UBE4A-201ENST00000252108 ACAA2P42765 397 aaKnown RBP3.76□□□□□ -1.81
UBE4A-201ENST00000252108 LUMP51884 338 aaPredicted RBP3.76□□□□□ -1.81
UBE4A-201ENST00000252108 ACTR1AP61163 376 aa3.76□□□□□ -1.81
UBE4A-201ENST00000252108 RPS15P62841 145 aaKnown RBP3.76□□□□□ -1.81
UBE4A-201ENST00000252108 ECH1Q13011 328 aa3.76□□□□□ -1.81
UBE4A-201ENST00000252108 COL9A2Q14055 689 aaPredicted RBP3.76□□□□□ -1.81
UBE4A-201ENST00000252108 PRRT3Q5FWE3 981 aa3.76□□□□□ -1.81
UBE4A-201ENST00000252108 TMEM196Q5HYL7 178 aa3.76□□□□□ -1.81
UBE4A-201ENST00000252108 ZNF585AQ6P3V2 769 aa3.76□□□□□ -1.81
UBE4A-201ENST00000252108 FIGNL1Q6PIW4 674 aa3.76□□□□□ -1.81
UBE4A-201ENST00000252108 PAPD4Q6PIY7 484 aaKnown RBP3.76□□□□□ -1.81
UBE4A-201ENST00000252108 LINC00518Q8N0U6 118 aa3.76□□□□□ -1.81
UBE4A-201ENST00000252108 SLC22A18ASQ8N1D0 253 aa3.76□□□□□ -1.81
UBE4A-201ENST00000252108 ARRDC1Q8N5I2 433 aa3.76□□□□□ -1.81
UBE4A-201ENST00000252108 OR8S1Q8NH09 359 aa3.76□□□□□ -1.81
UBE4A-201ENST00000252108 PMEPA1Q969W9 287 aa3.76□□□□□ -1.81
UBE4A-201ENST00000252108 GPX7Q96SL4 187 aaPredicted RBP3.76□□□□□ -1.81
UBE4A-201ENST00000252108 GPER1Q99527 375 aa3.76□□□□□ -1.81
UBE4A-201ENST00000252108 CMKLR1Q99788 373 aa3.76□□□□□ -1.81
UBE4A-201ENST00000252108 MICU1Q9BPX6 476 aa3.76□□□□□ -1.81
UBE4A-201ENST00000252108 SMDT1Q9H4I9 107 aa3.76□□□□□ -1.81
UBE4A-201ENST00000252108 AUNIPQ9H7T9 357 aa3.76□□□□□ -1.81
UBE4A-201ENST00000252108 KCNG2Q9UJ96 466 aa3.76□□□□□ -1.81
UBE4A-201ENST00000252108 NPIPA1Q9UND3 350 aa3.76□□□□□ -1.81
UBE4A-201ENST00000252108 B3GALT1Q9Y5Z6 326 aa3.76□□□□□ -1.81
UBE4A-201ENST00000252108 ARHGEF17Q96PE2 2063 aaPredicted RBP3.76□□□□□ -1.81
UBE4A-201ENST00000252108 NUMA1Q14980 2115 aa3.76□□□□□ -1.81
UBE4A-201ENST00000252108 C13orf42A0A1B0GVH6 325 aa3.76□□□□□ -1.81
UBE4A-201ENST00000252108 SH2D7A6NKC9 451 aaPredicted RBP3.76□□□□□ -1.81
UBE4A-201ENST00000252108 ZNF705EA8MWA4 302 aaPredicted RBP3.76□□□□□ -1.81
UBE4A-201ENST00000252108 EIF4E2O60573 245 aaKnown RBP3.76□□□□□ -1.81
UBE4A-201ENST00000252108 GALR3O60755 368 aaPredicted RBP3.76□□□□□ -1.81
UBE4A-201ENST00000252108 TRAPPC6AO75865 159 aa3.76□□□□□ -1.81
UBE4A-201ENST00000252108 SLC2A10O95528 541 aa3.76□□□□□ -1.81
UBE4A-201ENST00000252108 TSPAN15O95858 294 aa3.76□□□□□ -1.81
UBE4A-201ENST00000252108 RFC3P40938 356 aa3.76□□□□□ -1.81
UBE4A-201ENST00000252108 ADPRHP54922 357 aa3.76□□□□□ -1.81
UBE4A-201ENST00000252108 SRPXP78539 464 aa3.76□□□□□ -1.81
UBE4A-201ENST00000252108 SIM1P81133 766 aaPredicted RBP3.76□□□□□ -1.81
UBE4A-201ENST00000252108 PJVKQ0ZLH3 352 aa3.76□□□□□ -1.81
UBE4A-201ENST00000252108 C18orf63Q68DL7 685 aa3.76□□□□□ -1.81
UBE4A-201ENST00000252108 B3GLCTQ6Y288 498 aa3.76□□□□□ -1.81
UBE4A-201ENST00000252108 KCTD9Q7L273 389 aa3.76□□□□□ -1.81
UBE4A-201ENST00000252108 OLIG3Q7RTU3 272 aa3.76□□□□□ -1.81
UBE4A-201ENST00000252108 PRSS45Q7RTY3 260 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms