RNA–Protein interactions for RNA: ENST00000245816.8

CLPP-201, Transcript of caseinolytic mitochondrial matrix peptidase proteolytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPP, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPP-201ENST00000245816 TSPAN31Q12999 210 aa13.91□□□□□ -0.18
CLPP-201ENST00000245816 TOP3AQ13472 1001 aaPredicted RBP13.91□□□□□ -0.18
CLPP-201ENST00000245816 RFX4Q33E94 735 aa13.91□□□□□ -0.18
CLPP-201ENST00000245816 RPL13AP3Q6NVV1 102 aa13.91□□□□□ -0.18
CLPP-201ENST00000245816 AMIGO2Q86SJ2 522 aa13.91□□□□□ -0.18
CLPP-201ENST00000245816 IGFN1Q86VF2 1251 aa13.91□□□□□ -0.18
CLPP-201ENST00000245816 MEX3DQ86XN8 651 aaKnown RBP13.91□□□□□ -0.18
CLPP-201ENST00000245816 LRTOMTQ8WZ04 291 aa13.91□□□□□ -0.18
CLPP-201ENST00000245816 NABP1Q96AH0 204 aa13.91□□□□□ -0.18
CLPP-201ENST00000245816 ZNF570Q96NI8 536 aa13.91□□□□□ -0.18
CLPP-201ENST00000245816 SNX18Q96RF0 628 aa13.91□□□□□ -0.18
CLPP-201ENST00000245816 SH3GL3Q99963 347 aa13.91□□□□□ -0.18
CLPP-201ENST00000245816 VNN3Q9NY84 501 aa13.91□□□□□ -0.18
CLPP-201ENST00000245816 PRSS37A4D1T9 235 aa13.9□□□□□ -0.18
CLPP-201ENST00000245816 CCNB2O95067 398 aa13.9□□□□□ -0.18
CLPP-201ENST00000245816 SLC2A10O95528 541 aa13.9□□□□□ -0.18
CLPP-201ENST00000245816 SNAP29O95721 258 aa13.9□□□□□ -0.18
CLPP-201ENST00000245816 MMP7P09237 267 aaPredicted RBP13.9□□□□□ -0.18
CLPP-201ENST00000245816 SLC25A16P16260 332 aa13.9□□□□□ -0.18
CLPP-201ENST00000245816 ZNF16P17020 682 aaPredicted RBP13.9□□□□□ -0.18
CLPP-201ENST00000245816 SLC6A6P31641 620 aa13.9□□□□□ -0.18
CLPP-201ENST00000245816 ARHGDIAP52565 204 aa13.9□□□□□ -0.18
CLPP-201ENST00000245816 FXYD6P3P58550 94 aa13.9□□□□□ -0.18
CLPP-201ENST00000245816 PCBD1P61457 104 aa13.9□□□□□ -0.18
CLPP-201ENST00000245816 ELF3P78545 371 aaPredicted RBP13.9□□□□□ -0.18
CLPP-201ENST00000245816 PLP2Q04941 152 aa13.9□□□□□ -0.18
CLPP-201ENST00000245816 ATP6AP1Q15904 470 aa13.9□□□□□ -0.18
CLPP-201ENST00000245816 ZNF584Q8IVC4 421 aa13.9□□□□□ -0.18
CLPP-201ENST00000245816 OR4C15Q8NGM1 316 aa13.9□□□□□ -0.18
CLPP-201ENST00000245816 OR1J2Q8NGS2 313 aa13.9□□□□□ -0.18
CLPP-201ENST00000245816 Q96M85 177 aa13.9□□□□□ -0.18
CLPP-201ENST00000245816 GPA33Q99795 319 aa13.9□□□□□ -0.18
CLPP-201ENST00000245816 RNF121Q9H920 327 aa13.9□□□□□ -0.18
CLPP-201ENST00000245816 VSX1Q9NZR4 365 aaPredicted RBP13.9□□□□□ -0.18
CLPP-201ENST00000245816 ADAM18Q9Y3Q7 739 aa13.9□□□□□ -0.18
CLPP-201ENST00000245816 IGKV1D-43A0A0B4J1Z2 117 aa13.89□□□□□ -0.19
CLPP-201ENST00000245816 IQCMA0A1B0GVH7 501 aa13.89□□□□□ -0.19
CLPP-201ENST00000245816 H3BNX3 289 aa13.89□□□□□ -0.19
CLPP-201ENST00000245816 TP53P04637 393 aaPredicted RBP13.89□□□□□ -0.19
CLPP-201ENST00000245816 CST2P09228 141 aa13.89□□□□□ -0.19
CLPP-201ENST00000245816 GLRXP35754 106 aa13.89□□□□□ -0.19
CLPP-201ENST00000245816 NR4A2P43354 598 aa13.89□□□□□ -0.19
CLPP-201ENST00000245816 RPS23P62266 143 aaKnown RBP13.89□□□□□ -0.19
CLPP-201ENST00000245816 KRR1Q13601 381 aaKnown RBP13.89□□□□□ -0.19
CLPP-201ENST00000245816 DAG1Q14118 895 aa13.89□□□□□ -0.19
CLPP-201ENST00000245816 RAB39AQ14964 217 aa13.89□□□□□ -0.19
CLPP-201ENST00000245816 MESTQ5EB52 335 aa13.89□□□□□ -0.19
CLPP-201ENST00000245816 ZNF770Q6IQ21 691 aaPredicted RBP13.89□□□□□ -0.19
CLPP-201ENST00000245816 PGBD2Q6P3X8 592 aa13.89□□□□□ -0.19
CLPP-201ENST00000245816 THSD4Q6ZMP0 1018 aa13.89□□□□□ -0.19
CLPP-201ENST00000245816 C1orf174Q8IYL3 243 aa13.89□□□□□ -0.19
CLPP-201ENST00000245816 SVOPLQ8N434 492 aa13.89□□□□□ -0.19
CLPP-201ENST00000245816 CLDN22Q8N7P3 220 aa13.89□□□□□ -0.19
CLPP-201ENST00000245816 CENPNQ96H22 339 aaPredicted RBP13.89□□□□□ -0.19
CLPP-201ENST00000245816 PKP2Q99959 881 aa13.89□□□□□ -0.19
CLPP-201ENST00000245816 SEMA6AQ9H2E6 1030 aa13.89□□□□□ -0.19
CLPP-201ENST00000245816 IL20Q9NYY1 176 aa13.89□□□□□ -0.19
CLPP-201ENST00000245816 TEX13CA0A0J9YWL9 993 aa13.88□□□□□ -0.19
CLPP-201ENST00000245816 LYNX1G3V0Z9 82 aa13.88□□□□□ -0.19
CLPP-201ENST00000245816 LYNX1P0DP58 116 aa13.88□□□□□ -0.19
CLPP-201ENST00000245816 MSR1P21757 451 aa13.88□□□□□ -0.19
CLPP-201ENST00000245816 USF1P22415 310 aaPredicted RBP13.88□□□□□ -0.19
CLPP-201ENST00000245816 IGFBP5P24593 272 aa13.88□□□□□ -0.19
CLPP-201ENST00000245816 CRABP1P29762 137 aa13.88□□□□□ -0.19
CLPP-201ENST00000245816 IL2RGP31785 369 aa13.88□□□□□ -0.19
CLPP-201ENST00000245816 SNRPD2P62316 118 aaKnown RBP13.88□□□□□ -0.19
CLPP-201ENST00000245816 GALK2Q01415 458 aa13.88□□□□□ -0.19
CLPP-201ENST00000245816 FMODQ06828 376 aa13.88□□□□□ -0.19
CLPP-201ENST00000245816 MICAQ29983 383 aa13.88□□□□□ -0.19
CLPP-201ENST00000245816 LRP11Q86VZ4 500 aa13.88□□□□□ -0.19
CLPP-201ENST00000245816 SLC30A7Q8NEW0 376 aa13.88□□□□□ -0.19
CLPP-201ENST00000245816 FANK1Q8TC84 345 aa13.88□□□□□ -0.19
CLPP-201ENST00000245816 GIPC3Q8TF64 312 aa13.88□□□□□ -0.19
CLPP-201ENST00000245816 NSMAFQ92636 917 aa13.88□□□□□ -0.19
CLPP-201ENST00000245816 MSI2Q96DH6 328 aaKnown RBP13.88□□□□□ -0.19
CLPP-201ENST00000245816 VRK1Q99986 396 aaPredicted RBP13.88□□□□□ -0.19
CLPP-201ENST00000245816 OR52D1Q9H346 318 aa13.88□□□□□ -0.19
CLPP-201ENST00000245816 CCNB1IP1Q9NPC3 277 aa13.88□□□□□ -0.19
CLPP-201ENST00000245816 PDP1Q9P0J1 537 aaPredicted RBP13.88□□□□□ -0.19
CLPP-201ENST00000245816 MYEF2Q9P2K5 600 aaKnown RBP13.88□□□□□ -0.19
CLPP-201ENST00000245816 CMAHPQ9Y471 501 aa13.88□□□□□ -0.19
CLPP-201ENST00000245816 TIMM10BQ9Y5J6 103 aa13.88□□□□□ -0.19
CLPP-201ENST00000245816 IER3IP1Q9Y5U9 82 aa13.88□□□□□ -0.19
CLPP-201ENST00000245816 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.87□□□□□ -0.19
CLPP-201ENST00000245816 ARRDC5A6NEK1 342 aa13.87□□□□□ -0.19
CLPP-201ENST00000245816 C12orf71A8MTZ7 269 aa13.87□□□□□ -0.19
CLPP-201ENST00000245816 GSTM3P21266 225 aa13.87□□□□□ -0.19
CLPP-201ENST00000245816 CDAP32320 146 aa13.87□□□□□ -0.19
CLPP-201ENST00000245816 PPOXP50336 477 aa13.87□□□□□ -0.19
CLPP-201ENST00000245816 PDLIM4P50479 330 aa13.87□□□□□ -0.19
CLPP-201ENST00000245816 LSM6P62312 80 aaKnown RBP13.87□□□□□ -0.19
CLPP-201ENST00000245816 SRSF2Q01130 221 aaKnown RBP13.87□□□□□ -0.19
CLPP-201ENST00000245816 COX10Q12887 443 aa13.87□□□□□ -0.19
CLPP-201ENST00000245816 SNTB2Q13425 540 aaKnown RBP13.87□□□□□ -0.19
CLPP-201ENST00000245816 GGTLC2Q14390 218 aa13.87□□□□□ -0.19
CLPP-201ENST00000245816 SGCAQ16586 387 aa13.87□□□□□ -0.19
CLPP-201ENST00000245816 TBC1D28Q2M2D7 210 aa13.87□□□□□ -0.19
CLPP-201ENST00000245816 KRT80Q6KB66 452 aa13.87□□□□□ -0.19
CLPP-201ENST00000245816 UNQ6126/PRO20091Q6UXV3 157 aa13.87□□□□□ -0.19
CLPP-201ENST00000245816 ZNF620Q6ZNG0 422 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms