RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 PAQR5Q9NXK6 330 aaPredicted RBP13.47□□□□□ -0.25
HDHD3-201ENST00000238379 SPRR3Q9UBC9 169 aa13.47□□□□□ -0.25
HDHD3-201ENST00000238379 ZNF281Q9Y2X9 895 aa13.47□□□□□ -0.25
HDHD3-201ENST00000238379 IGKV3D-15A0A087WSY6 115 aa13.46□□□□□ -0.25
HDHD3-201ENST00000238379 A0A087WV48 116 aa13.46□□□□□ -0.25
HDHD3-201ENST00000238379 A0A1B0GTH9 108 aa13.46□□□□□ -0.25
HDHD3-201ENST00000238379 OR4C45A6NMZ5 311 aa13.46□□□□□ -0.25
HDHD3-201ENST00000238379 CASKO14936 926 aa13.46□□□□□ -0.25
HDHD3-201ENST00000238379 DHHO43323 396 aa13.46□□□□□ -0.25
HDHD3-201ENST00000238379 SERPINA3P01011 423 aa13.46□□□□□ -0.25
HDHD3-201ENST00000238379 CPN1P15169 458 aa13.46□□□□□ -0.25
HDHD3-201ENST00000238379 ZMAT1Q5H9K5 638 aa13.46□□□□□ -0.25
HDHD3-201ENST00000238379 FOXL2NBQ6ZUU3 175 aa13.46□□□□□ -0.25
HDHD3-201ENST00000238379 AAED1Q7RTV5 226 aa13.46□□□□□ -0.25
HDHD3-201ENST00000238379 ZADH2Q8N4Q0 377 aa13.46□□□□□ -0.25
HDHD3-201ENST00000238379 TEX19Q8NA77 164 aa13.46□□□□□ -0.25
HDHD3-201ENST00000238379 RNF133Q8WVZ7 376 aa13.46□□□□□ -0.25
HDHD3-201ENST00000238379 RGP1Q92546 391 aaPredicted RBP13.46□□□□□ -0.25
HDHD3-201ENST00000238379 HTRA1Q92743 480 aa13.46□□□□□ -0.25
HDHD3-201ENST00000238379 C6orf62Q9GZU0 229 aaPredicted RBP13.46□□□□□ -0.25
HDHD3-201ENST00000238379 AKIP1Q9NQ31 210 aa13.46□□□□□ -0.25
HDHD3-201ENST00000238379 LRP12Q9Y561 859 aa13.46□□□□□ -0.25
HDHD3-201ENST00000238379 PCDHGA9Q9Y5G4 932 aaKnown RBP13.46□□□□□ -0.25
HDHD3-201ENST00000238379 LHFPL6Q9Y693 200 aa13.46□□□□□ -0.25
HDHD3-201ENST00000238379 FRYQ5TBA9 3013 aa13.46□□□□□ -0.26
HDHD3-201ENST00000238379 PHF3Q92576 2039 aaKnown RBP13.46□□□□□ -0.26
HDHD3-201ENST00000238379 TFECO14948 347 aaPredicted RBP13.46□□□□□ -0.26
HDHD3-201ENST00000238379 SLC43A1O75387 559 aa13.46□□□□□ -0.26
HDHD3-201ENST00000238379 ZNF254O75437 659 aa13.46□□□□□ -0.26
HDHD3-201ENST00000238379 SYNGR4O95473 234 aa13.46□□□□□ -0.26
HDHD3-201ENST00000238379 PNPP00491 289 aa13.46□□□□□ -0.26
HDHD3-201ENST00000238379 IGHG3P01860 377 aa13.46□□□□□ -0.26
HDHD3-201ENST00000238379 ZNF24P17028 368 aa13.46□□□□□ -0.26
HDHD3-201ENST00000238379 CALRP27797 417 aaKnown RBP13.46□□□□□ -0.26
HDHD3-201ENST00000238379 MTNR1BP49286 362 aa13.46□□□□□ -0.26
HDHD3-201ENST00000238379 RIDAP52758 137 aaKnown RBP13.46□□□□□ -0.26
HDHD3-201ENST00000238379 DYNC1I2Q13409 638 aaKnown RBP13.46□□□□□ -0.26
HDHD3-201ENST00000238379 C3AR1Q16581 482 aa13.46□□□□□ -0.26
HDHD3-201ENST00000238379 ZNF829Q3KNS6 432 aaPredicted RBP13.46□□□□□ -0.26
HDHD3-201ENST00000238379 OR7E24Q6IFN5 339 aa13.46□□□□□ -0.26
HDHD3-201ENST00000238379 DEGS2Q6QHC5 323 aa13.46□□□□□ -0.26
HDHD3-201ENST00000238379 PLXDC2Q6UX71 529 aa13.46□□□□□ -0.26
HDHD3-201ENST00000238379 UNQ9370/PRO34162Q6UXP9 181 aa13.46□□□□□ -0.26
HDHD3-201ENST00000238379 PRSS35Q8N3Z0 413 aa13.46□□□□□ -0.26
HDHD3-201ENST00000238379 WDYHV1Q96HA8 205 aa13.46□□□□□ -0.26
HDHD3-201ENST00000238379 DCBLD2Q96PD2 775 aa13.46□□□□□ -0.26
HDHD3-201ENST00000238379 KCNS3Q9BQ31 491 aa13.46□□□□□ -0.26
HDHD3-201ENST00000238379 EXO5Q9H790 373 aa13.46□□□□□ -0.26
HDHD3-201ENST00000238379 PLEKHB1Q9UF11 243 aaPredicted RBP13.46□□□□□ -0.26
HDHD3-201ENST00000238379 URB1O60287 2271 aaKnown RBP13.45□□□□□ -0.26
HDHD3-201ENST00000238379 SMIM30A4D0T7 59 aa13.45□□□□□ -0.26
HDHD3-201ENST00000238379 SRSF10O75494 262 aaKnown RBP13.45□□□□□ -0.26
HDHD3-201ENST00000238379 GATBO75879 557 aaKnown RBP13.45□□□□□ -0.26
HDHD3-201ENST00000238379 KIR3DL2P43630 455 aa13.45□□□□□ -0.26
HDHD3-201ENST00000238379 HNRNPA0Q13151 305 aaKnown RBP13.45□□□□□ -0.26
HDHD3-201ENST00000238379 YIF1BQ5BJH7 314 aa13.45□□□□□ -0.26
HDHD3-201ENST00000238379 SPACA3Q8IXA5 215 aa13.45□□□□□ -0.26
HDHD3-201ENST00000238379 OR10S1Q8NGN2 331 aa13.45□□□□□ -0.26
HDHD3-201ENST00000238379 OR5AK2Q8NH90 309 aa13.45□□□□□ -0.26
HDHD3-201ENST00000238379 FNDC9Q8TBE3 224 aa13.45□□□□□ -0.26
HDHD3-201ENST00000238379 TMEM45BQ96B21 275 aa13.45□□□□□ -0.26
HDHD3-201ENST00000238379 SLAMF6Q96DU3 332 aa13.45□□□□□ -0.26
HDHD3-201ENST00000238379 ZNF837Q96EG3 531 aaPredicted RBP13.45□□□□□ -0.26
HDHD3-201ENST00000238379 C4orf45Q96LM5 186 aa13.45□□□□□ -0.26
HDHD3-201ENST00000238379 OR14A2Q96R54 314 aa13.45□□□□□ -0.26
HDHD3-201ENST00000238379 ULBP2Q9BZM5 246 aa13.45□□□□□ -0.26
HDHD3-201ENST00000238379 C1orf198Q9H425 327 aa13.45□□□□□ -0.26
HDHD3-201ENST00000238379 MCTS1Q9ULC4 181 aaKnown RBP13.45□□□□□ -0.26
HDHD3-201ENST00000238379 ACACAQ13085 2346 aa13.45□□□□□ -0.26
HDHD3-201ENST00000238379 IQCMA0A1B0GVH7 501 aa13.44□□□□□ -0.26
HDHD3-201ENST00000238379 CLDN25C9JDP6 229 aa13.44□□□□□ -0.26
HDHD3-201ENST00000238379 GPR171O14626 319 aa13.44□□□□□ -0.26
HDHD3-201ENST00000238379 BMP4P12644 408 aa13.44□□□□□ -0.26
HDHD3-201ENST00000238379 CCR9P51686 369 aa13.44□□□□□ -0.26
HDHD3-201ENST00000238379 CAV3P56539 151 aa13.44□□□□□ -0.26
HDHD3-201ENST00000238379 DCTN2Q13561 401 aaKnown RBP13.44□□□□□ -0.26
HDHD3-201ENST00000238379 WDR38Q5JTN6 314 aa13.44□□□□□ -0.26
HDHD3-201ENST00000238379 PAMR1Q6UXH9 720 aa13.44□□□□□ -0.26
HDHD3-201ENST00000238379 CFAP77Q6ZQR2 320 aa13.44□□□□□ -0.26
HDHD3-201ENST00000238379 MFSD4AQ8N468 514 aa13.44□□□□□ -0.26
HDHD3-201ENST00000238379 NABP1Q96AH0 204 aa13.44□□□□□ -0.26
HDHD3-201ENST00000238379 NELFAQ9H3P2 528 aa13.44□□□□□ -0.26
HDHD3-201ENST00000238379 GDF2Q9UK05 429 aaPredicted RBP13.44□□□□□ -0.26
HDHD3-201ENST00000238379 FBXL3Q9UKT7 428 aa13.44□□□□□ -0.26
HDHD3-201ENST00000238379 SPTBN4Q9H254 2564 aa13.44□□□□□ -0.26
HDHD3-201ENST00000238379 TNRC6AQ8NDV7 1962 aaKnown RBP13.44□□□□□ -0.26
HDHD3-201ENST00000238379 TMEM212A6NML5 194 aa13.43□□□□□ -0.26
HDHD3-201ENST00000238379 CTDSP2O14595 271 aa13.43□□□□□ -0.26
HDHD3-201ENST00000238379 UCHL1P09936 223 aa13.43□□□□□ -0.26
HDHD3-201ENST00000238379 MSR1P21757 451 aa13.43□□□□□ -0.26
HDHD3-201ENST00000238379 LSM6P62312 80 aaKnown RBP13.43□□□□□ -0.26
HDHD3-201ENST00000238379 MFGE8Q08431 387 aaPredicted RBP13.43□□□□□ -0.26
HDHD3-201ENST00000238379 SGCAQ16586 387 aa13.43□□□□□ -0.26
HDHD3-201ENST00000238379 NR2C2APQ86WQ0 139 aa13.43□□□□□ -0.26
HDHD3-201ENST00000238379 IL17RDQ8NFM7 739 aa13.43□□□□□ -0.26
HDHD3-201ENST00000238379 OR2AJ1Q8NGZ0 328 aa13.43□□□□□ -0.26
HDHD3-201ENST00000238379 S100ZQ8WXG8 99 aa13.43□□□□□ -0.26
HDHD3-201ENST00000238379 PHYHIPQ92561 330 aa13.43□□□□□ -0.26
HDHD3-201ENST00000238379 RBM24Q9BX46 236 aaKnown RBP13.43□□□□□ -0.26
HDHD3-201ENST00000238379 PLGRKTQ9HBL7 147 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms