RNA–Protein interactions for RNA: ENST00000232888.6

RRP9-201, Transcript of ribosomal RNA processing 9, U3 small nucleolar RNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP9, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP9-201ENST00000232888 WASF3Q9UPY6 502 aa21.09■□□□□ 0.97
RRP9-201ENST00000232888 PCDHGA9Q9Y5G4 932 aaKnown RBP21.09■□□□□ 0.97
RRP9-201ENST00000232888 TRAV1-2A0A0B4J238 106 aa21.08■□□□□ 0.97
RRP9-201ENST00000232888 DLL1O00548 723 aa21.08■□□□□ 0.97
RRP9-201ENST00000232888 ZFPL1O95159 310 aa21.08■□□□□ 0.97
RRP9-201ENST00000232888 CPN1P15169 458 aa21.08■□□□□ 0.97
RRP9-201ENST00000232888 DCTDP32321 178 aa21.08■□□□□ 0.97
RRP9-201ENST00000232888 RPS11P62280 158 aaKnown RBP eCLIP21.08■□□□□ 0.97
RRP9-201ENST00000232888 ZMAT1Q5H9K5 638 aa21.08■□□□□ 0.97
RRP9-201ENST00000232888 LRRC69Q6ZNQ3 347 aa21.08■□□□□ 0.97
RRP9-201ENST00000232888 AAED1Q7RTV5 226 aa21.08■□□□□ 0.97
RRP9-201ENST00000232888 TPK1Q9H3S4 243 aa21.08■□□□□ 0.97
RRP9-201ENST00000232888 PALMDQ9NP74 551 aa21.08■□□□□ 0.97
RRP9-201ENST00000232888 B3GAT2Q9NPZ5 323 aa21.08■□□□□ 0.97
RRP9-201ENST00000232888 POLE4Q9NR33 117 aa21.08■□□□□ 0.97
RRP9-201ENST00000232888 EMC3Q9P0I2 261 aa21.08■□□□□ 0.97
RRP9-201ENST00000232888 MSRB2Q9Y3D2 182 aa21.08■□□□□ 0.97
RRP9-201ENST00000232888 UGT2A1Q9Y4X1 527 aa21.08■□□□□ 0.97
RRP9-201ENST00000232888 MED12Q93074 2177 aa21.08■□□□□ 0.97
RRP9-201ENST00000232888 KIAA1549Q9HCM3 1950 aa21.08■□□□□ 0.96
RRP9-201ENST00000232888 OR4C45A6NMZ5 311 aa21.07■□□□□ 0.96
RRP9-201ENST00000232888 DHHO43323 396 aa21.07■□□□□ 0.96
RRP9-201ENST00000232888 UCHL1P09936 223 aa21.07■□□□□ 0.96
RRP9-201ENST00000232888 ZNF84P51523 738 aa21.07■□□□□ 0.96
RRP9-201ENST00000232888 MXD1Q05195 221 aa21.07■□□□□ 0.96
RRP9-201ENST00000232888 HNRNPA0Q13151 305 aaKnown RBP21.07■□□□□ 0.96
RRP9-201ENST00000232888 INSL4Q14641 139 aa21.07■□□□□ 0.96
RRP9-201ENST00000232888 OR2AJ1Q8NGZ0 328 aa21.07■□□□□ 0.96
RRP9-201ENST00000232888 ZNF845Q96IR2 970 aaPredicted RBP21.07■□□□□ 0.96
RRP9-201ENST00000232888 C4orf45Q96LM5 186 aa21.07■□□□□ 0.96
RRP9-201ENST00000232888 PDCD1LG2Q9BQ51 273 aa21.07■□□□□ 0.96
RRP9-201ENST00000232888 IGHG3P01860 377 aa21.06■□□□□ 0.96
RRP9-201ENST00000232888 MAPK3P27361 379 aaPredicted RBP21.06■□□□□ 0.96
RRP9-201ENST00000232888 CALRP27797 417 aaKnown RBP21.06■□□□□ 0.96
RRP9-201ENST00000232888 SELENOPP49908 381 aa21.06■□□□□ 0.96
RRP9-201ENST00000232888 SRYQ05066 204 aa21.06■□□□□ 0.96
RRP9-201ENST00000232888 RNFT1Q5M7Z0 435 aa21.06■□□□□ 0.96
RRP9-201ENST00000232888 RIPPLY2Q5TAB7 128 aa21.06■□□□□ 0.96
RRP9-201ENST00000232888 CHMP1BQ7LBR1 199 aa21.06■□□□□ 0.96
RRP9-201ENST00000232888 ULBP2Q9BZM5 246 aa21.06■□□□□ 0.96
RRP9-201ENST00000232888 EXO5Q9H790 373 aa21.06■□□□□ 0.96
RRP9-201ENST00000232888 POLR1DQ9Y2S0 133 aa21.06■□□□□ 0.96
RRP9-201ENST00000232888 LRP12Q9Y561 859 aa21.06■□□□□ 0.96
RRP9-201ENST00000232888 CSAG2Q9Y5P2 127 aa21.06■□□□□ 0.96
RRP9-201ENST00000232888 ZNF879B4DU55 563 aa21.06■□□□□ 0.96
RRP9-201ENST00000232888 TAF4O00268 1085 aa21.06■□□□□ 0.96
RRP9-201ENST00000232888 CLEC2LP0C7M8 214 aa21.06■□□□□ 0.96
RRP9-201ENST00000232888 MSR1P21757 451 aa21.06■□□□□ 0.96
RRP9-201ENST00000232888 DEFB127Q9H1M4 99 aa21.06■□□□□ 0.96
RRP9-201ENST00000232888 NELFAQ9H3P2 528 aa21.06■□□□□ 0.96
RRP9-201ENST00000232888 NIPAL2Q9H841 368 aa21.06■□□□□ 0.96
RRP9-201ENST00000232888 SMURF1Q9HCE7 757 aa21.06■□□□□ 0.96
RRP9-201ENST00000232888 PARPBPQ9NWS1 579 aa21.06■□□□□ 0.96
RRP9-201ENST00000232888 PLEKHB1Q9UF11 243 aaPredicted RBP21.06■□□□□ 0.96
RRP9-201ENST00000232888 TFECO14948 347 aaPredicted RBP21.05■□□□□ 0.96
RRP9-201ENST00000232888 H2BFMP0C1H6 154 aa21.05■□□□□ 0.96
RRP9-201ENST00000232888 ZNF24P17028 368 aa21.05■□□□□ 0.96
RRP9-201ENST00000232888 RNPS1Q15287 305 aaKnown RBP21.05■□□□□ 0.96
RRP9-201ENST00000232888 INAQ16352 499 aa21.05■□□□□ 0.96
RRP9-201ENST00000232888 OTPQ5XKR4 325 aa21.05■□□□□ 0.96
RRP9-201ENST00000232888 HIST2H2ABQ8IUE6 130 aaPredicted RBP21.05■□□□□ 0.96
RRP9-201ENST00000232888 LINC00346Q8IVM7 164 aa21.05■□□□□ 0.96
RRP9-201ENST00000232888 MFSD4AQ8N468 514 aa21.05■□□□□ 0.96
RRP9-201ENST00000232888 HSD17B8Q92506 261 aa21.05■□□□□ 0.96
RRP9-201ENST00000232888 SLAMF6Q96DU3 332 aa21.05■□□□□ 0.96
RRP9-201ENST00000232888 KCNS3Q9BQ31 491 aa21.05■□□□□ 0.96
RRP9-201ENST00000232888 GDF2Q9UK05 429 aaPredicted RBP21.05■□□□□ 0.96
RRP9-201ENST00000232888 LHFPL6Q9Y693 200 aa21.05■□□□□ 0.96
RRP9-201ENST00000232888 R4GMQ9 66 aa21.05■□□□□ 0.96
RRP9-201ENST00000232888 OR6C65A6NJZ3 312 aa21.04■□□□□ 0.96
RRP9-201ENST00000232888 ZNF724A8MTY0 619 aa21.04■□□□□ 0.96
RRP9-201ENST00000232888 ITGB2P05107 769 aa21.04■□□□□ 0.96
RRP9-201ENST00000232888 NPR2P20594 1047 aa21.04■□□□□ 0.96
RRP9-201ENST00000232888 ETV6P41212 452 aa21.04■□□□□ 0.96
RRP9-201ENST00000232888 MRPS34P82930 218 aaKnown RBP21.04■□□□□ 0.96
RRP9-201ENST00000232888 ZNF45Q02386 682 aa21.04■□□□□ 0.96
RRP9-201ENST00000232888 PHYHD1Q5SRE7 291 aa21.04■□□□□ 0.96
RRP9-201ENST00000232888 GPR137CQ8N3F9 429 aa21.04■□□□□ 0.96
RRP9-201ENST00000232888 ZNF676Q8N7Q3 588 aa21.04■□□□□ 0.96
RRP9-201ENST00000232888 CPT1CQ8TCG5 803 aa21.04■□□□□ 0.96
RRP9-201ENST00000232888 TRBV5-5A0A0J9YX44 114 aa21.03■□□□□ 0.96
RRP9-201ENST00000232888 SHISA3A0PJX4 238 aa21.03■□□□□ 0.96
RRP9-201ENST00000232888 RAF1P04049 648 aa21.03■□□□□ 0.96
RRP9-201ENST00000232888 BMP4P12644 408 aa21.03■□□□□ 0.96
RRP9-201ENST00000232888 CDAP32320 146 aa21.03■□□□□ 0.96
RRP9-201ENST00000232888 STK11Q15831 433 aa21.03■□□□□ 0.96
RRP9-201ENST00000232888 Q499Y3 187 aa21.03■□□□□ 0.96
RRP9-201ENST00000232888 WDR38Q5JTN6 314 aa21.03■□□□□ 0.96
RRP9-201ENST00000232888 OR7E24Q6IFN5 339 aa21.03■□□□□ 0.96
RRP9-201ENST00000232888 CATSPERDQ86XM0 798 aa21.03■□□□□ 0.96
RRP9-201ENST00000232888 PRSS35Q8N3Z0 413 aa21.03■□□□□ 0.96
RRP9-201ENST00000232888 OR13C5Q8NGS8 318 aa21.03■□□□□ 0.96
RRP9-201ENST00000232888 GPR148Q8TDV2 347 aa21.03■□□□□ 0.96
RRP9-201ENST00000232888 ABHD3Q8WU67 409 aa21.03■□□□□ 0.96
RRP9-201ENST00000232888 ACOT12Q8WYK0 555 aa21.03■□□□□ 0.96
RRP9-201ENST00000232888 WDYHV1Q96HA8 205 aa21.03■□□□□ 0.96
RRP9-201ENST00000232888 WDFY2Q96P53 400 aa21.03■□□□□ 0.96
RRP9-201ENST00000232888 PRRG4Q9BZD6 226 aa21.03■□□□□ 0.96
RRP9-201ENST00000232888 PPIL3Q9H2H8 161 aaKnown RBP21.03■□□□□ 0.96
RRP9-201ENST00000232888 BCO1Q9HAY6 547 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms