RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 SPACA5Q96QH8 159 aa16.79■□□□□ 0.28
CLIP2-201ENST00000223398 NUP205Q92621 2012 aa16.79■□□□□ 0.28
CLIP2-201ENST00000223398 SIRPB1O00241 398 aa16.79■□□□□ 0.28
CLIP2-201ENST00000223398 DMRTC1Q5HYR2 192 aa16.79■□□□□ 0.28
CLIP2-201ENST00000223398 ACSM5Q6NUN0 579 aa16.79■□□□□ 0.28
CLIP2-201ENST00000223398 TMEM81Q6P7N7 255 aa16.79■□□□□ 0.28
CLIP2-201ENST00000223398 DOK3Q7L591 496 aa16.79■□□□□ 0.28
CLIP2-201ENST00000223398 FAM185AQ8N0U4 392 aa16.79■□□□□ 0.28
CLIP2-201ENST00000223398 OR2V1Q8NHB1 315 aa16.79■□□□□ 0.28
CLIP2-201ENST00000223398 GATA6Q92908 595 aa16.79■□□□□ 0.28
CLIP2-201ENST00000223398 KISS1RQ969F8 398 aaPredicted RBP16.79■□□□□ 0.28
CLIP2-201ENST00000223398 SARGQ9BW04 601 aa16.79■□□□□ 0.28
CLIP2-201ENST00000223398 IKZF5Q9H5V7 419 aa16.79■□□□□ 0.28
CLIP2-201ENST00000223398 A0A0A6YYD5 115 aa16.79■□□□□ 0.28
CLIP2-201ENST00000223398 TRAV17A0A0B4J275 112 aa16.79■□□□□ 0.28
CLIP2-201ENST00000223398 ANKRD61A6NGH8 418 aa16.79■□□□□ 0.28
CLIP2-201ENST00000223398 CRYABP02511 175 aaKnown RBP16.79■□□□□ 0.28
CLIP2-201ENST00000223398 DEFA4P12838 97 aa16.79■□□□□ 0.28
CLIP2-201ENST00000223398 SELEP16581 610 aa16.79■□□□□ 0.28
CLIP2-201ENST00000223398 SRMP19623 302 aa16.79■□□□□ 0.28
CLIP2-201ENST00000223398 KITLGP21583 273 aa16.79■□□□□ 0.28
CLIP2-201ENST00000223398 GDNFP39905 211 aa16.79■□□□□ 0.28
CLIP2-201ENST00000223398 THEM4Q5T1C6 240 aa16.79■□□□□ 0.28
CLIP2-201ENST00000223398 FCRL6Q6DN72 434 aa16.79■□□□□ 0.28
CLIP2-201ENST00000223398 DEDD2Q8WXF8 326 aa16.79■□□□□ 0.28
CLIP2-201ENST00000223398 UBL7Q96S82 380 aaPredicted RBP16.79■□□□□ 0.28
CLIP2-201ENST00000223398 TINAGL1Q9GZM7 467 aaPredicted RBP16.79■□□□□ 0.28
CLIP2-201ENST00000223398 ING1Q9UK53 422 aaPredicted RBP16.79■□□□□ 0.28
CLIP2-201ENST00000223398 TMEM82A0PJX8 343 aa16.79■□□□□ 0.28
CLIP2-201ENST00000223398 ZNF891A8MT65 544 aaPredicted RBP16.79■□□□□ 0.28
CLIP2-201ENST00000223398 TRA2AQ13595 282 aaKnown RBP eCLIP16.79■□□□□ 0.28
CLIP2-201ENST00000223398 PHLDA2Q53GA4 152 aa16.79■□□□□ 0.28
CLIP2-201ENST00000223398 KRBOX4Q5JUW0 171 aa16.79■□□□□ 0.28
CLIP2-201ENST00000223398 SPATA46Q5T0L3 261 aa16.79■□□□□ 0.28
CLIP2-201ENST00000223398 KDM4DQ6B0I6 523 aa16.79■□□□□ 0.28
CLIP2-201ENST00000223398 CCDC71Q8IV32 467 aaPredicted RBP16.79■□□□□ 0.28
CLIP2-201ENST00000223398 AKR1C1Q04828 323 aa16.78■□□□□ 0.28
CLIP2-201ENST00000223398 IL11RAQ14626 422 aa16.78■□□□□ 0.28
CLIP2-201ENST00000223398 ZNF169Q14929 603 aaPredicted RBP16.78■□□□□ 0.28
CLIP2-201ENST00000223398 ZFAND2BQ8WV99 257 aa16.78■□□□□ 0.28
CLIP2-201ENST00000223398 GNRHR2Q96P88 292 aa16.78■□□□□ 0.28
CLIP2-201ENST00000223398 NMNAT2Q9BZQ4 307 aa16.78■□□□□ 0.28
CLIP2-201ENST00000223398 FAM90A27PA6NNH2 459 aa16.78■□□□□ 0.28
CLIP2-201ENST00000223398 ZNF14P17017 642 aaPredicted RBP16.78■□□□□ 0.28
CLIP2-201ENST00000223398 RDH10Q8IZV5 341 aa16.78■□□□□ 0.28
CLIP2-201ENST00000223398 OR51F2Q8NH61 342 aa16.78■□□□□ 0.28
CLIP2-201ENST00000223398 UPRTQ96BW1 309 aa16.78■□□□□ 0.28
CLIP2-201ENST00000223398 HINT3Q9NQE9 182 aaKnown RBP16.78■□□□□ 0.28
CLIP2-201ENST00000223398 PAPLNO95428 1278 aa16.78■□□□□ 0.28
CLIP2-201ENST00000223398 GCNT2Q8N0V5 402 aa16.78■□□□□ 0.28
CLIP2-201ENST00000223398 SLC25A31Q9H0C2 315 aa16.78■□□□□ 0.28
CLIP2-201ENST00000223398 GNB4Q9HAV0 340 aa16.78■□□□□ 0.28
CLIP2-201ENST00000223398 SBK2P0C263 348 aa16.78■□□□□ 0.28
CLIP2-201ENST00000223398 LAP3P28838 519 aa16.78■□□□□ 0.28
CLIP2-201ENST00000223398 ZNF620Q6ZNG0 422 aa16.78■□□□□ 0.28
CLIP2-201ENST00000223398 FBXO17Q96EF6 278 aa16.78■□□□□ 0.28
CLIP2-201ENST00000223398 GABRG3Q99928 467 aa16.78■□□□□ 0.28
CLIP2-201ENST00000223398 KCNE3Q9Y6H6 103 aa16.78■□□□□ 0.28
CLIP2-201ENST00000223398 BTBD17A6NE02 478 aa16.78■□□□□ 0.28
CLIP2-201ENST00000223398 CLDN1O95832 211 aa16.78■□□□□ 0.28
CLIP2-201ENST00000223398 AGERQ15109 404 aa16.78■□□□□ 0.28
CLIP2-201ENST00000223398 RHOXF1Q8NHV9 184 aa16.78■□□□□ 0.28
CLIP2-201ENST00000223398 GPBAR1Q8TDU6 330 aa16.78■□□□□ 0.28
CLIP2-201ENST00000223398 OR2B2Q9GZK3 357 aa16.78■□□□□ 0.28
CLIP2-201ENST00000223398 SPAARA0A1B0GVQ0 90 aa16.77■□□□□ 0.28
CLIP2-201ENST00000223398 PHF1O43189 567 aaPredicted RBP16.77■□□□□ 0.28
CLIP2-201ENST00000223398 HTR2BP41595 481 aa16.77■□□□□ 0.28
CLIP2-201ENST00000223398 RBP2P50120 134 aa16.77■□□□□ 0.28
CLIP2-201ENST00000223398 ADGRE4PQ86SQ3 457 aa16.77■□□□□ 0.28
CLIP2-201ENST00000223398 SMRP1Q8NCR6 262 aa16.77■□□□□ 0.28
CLIP2-201ENST00000223398 OR10G3Q8NGC4 313 aa16.77■□□□□ 0.28
CLIP2-201ENST00000223398 ALG14Q96F25 216 aa16.77■□□□□ 0.28
CLIP2-201ENST00000223398 SEC22AQ96IW7 307 aa16.77■□□□□ 0.28
CLIP2-201ENST00000223398 PRELID3BQ9Y3B1 194 aa16.77■□□□□ 0.28
CLIP2-201ENST00000223398 FBXO7Q9Y3I1 522 aa16.77■□□□□ 0.28
CLIP2-201ENST00000223398 A0A1W2PR80 420 aa16.77■□□□□ 0.28
CLIP2-201ENST00000223398 OR6C65A6NJZ3 312 aa16.77■□□□□ 0.28
CLIP2-201ENST00000223398 TNFSF14O43557 240 aa16.77■□□□□ 0.28
CLIP2-201ENST00000223398 CDK4P11802 303 aa16.77■□□□□ 0.28
CLIP2-201ENST00000223398 GLRA1P23415 457 aa16.77■□□□□ 0.28
CLIP2-201ENST00000223398 GK2Q14410 553 aaPredicted RBP16.77■□□□□ 0.28
CLIP2-201ENST00000223398 C16orf47Q6ZP98 133 aaPredicted RBP16.77■□□□□ 0.28
CLIP2-201ENST00000223398 QPCTLQ9NXS2 382 aa16.77■□□□□ 0.28
CLIP2-201ENST00000223398 HOXB3P14651 431 aaPredicted RBP16.77■□□□□ 0.27
CLIP2-201ENST00000223398 ACTBL2Q562R1 376 aa16.77■□□□□ 0.27
CLIP2-201ENST00000223398 HACD4Q5VWC8 232 aa16.77■□□□□ 0.27
CLIP2-201ENST00000223398 KIRREL2Q6UWL6 708 aa16.77■□□□□ 0.27
CLIP2-201ENST00000223398 WDSUB1Q8N9V3 476 aa16.77■□□□□ 0.27
CLIP2-201ENST00000223398 GIMAP1Q8WWP7 306 aa16.77■□□□□ 0.27
CLIP2-201ENST00000223398 RDH5Q92781 318 aa16.77■□□□□ 0.27
CLIP2-201ENST00000223398 BRWD1Q9NSI6 2320 aa16.77■□□□□ 0.27
CLIP2-201ENST00000223398 RGS11O94810 467 aa16.77■□□□□ 0.27
CLIP2-201ENST00000223398 EIF4EP06730 217 aaKnown RBP16.77■□□□□ 0.27
CLIP2-201ENST00000223398 MTNR1BP49286 362 aa16.77■□□□□ 0.27
CLIP2-201ENST00000223398 MEOX1P50221 254 aa16.77■□□□□ 0.27
CLIP2-201ENST00000223398 GNB1P62873 340 aa16.77■□□□□ 0.27
CLIP2-201ENST00000223398 LINC01555Q8NAE3 123 aa16.77■□□□□ 0.27
CLIP2-201ENST00000223398 FAM173AQ9BQD7 235 aa16.77■□□□□ 0.27
CLIP2-201ENST00000223398 C7orf50Q9BRJ6 194 aaKnown RBP16.77■□□□□ 0.27
CLIP2-201ENST00000223398 PCSK6P29122 969 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms