RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 MANEAQ5SRI9 462 aa12.44□□□□□ -0.42
TGFBR3-201ENST00000212355 ZBED3Q96IU2 234 aaPredicted RBP12.44□□□□□ -0.42
TGFBR3-201ENST00000212355 ZNF2Q9BSG1 426 aaPredicted RBP12.44□□□□□ -0.42
TGFBR3-201ENST00000212355 MAGT1Q9H0U3 335 aa12.44□□□□□ -0.42
TGFBR3-201ENST00000212355 FBXO8Q9NRD0 319 aa12.44□□□□□ -0.42
TGFBR3-201ENST00000212355 PHIPQ8WWQ0 1821 aa12.44□□□□□ -0.42
TGFBR3-201ENST00000212355 RAB19A4D1S5 217 aa12.44□□□□□ -0.42
TGFBR3-201ENST00000212355 PRAMEF25A6NGN4 478 aa12.44□□□□□ -0.42
TGFBR3-201ENST00000212355 ATP1B1P05026 303 aa12.44□□□□□ -0.42
TGFBR3-201ENST00000212355 HLA-DOBP13765 273 aa12.44□□□□□ -0.42
TGFBR3-201ENST00000212355 NAGAP17050 411 aa12.44□□□□□ -0.42
TGFBR3-201ENST00000212355 MAP2K6P52564 334 aa12.44□□□□□ -0.42
TGFBR3-201ENST00000212355 SLC25A35Q3KQZ1 300 aa12.44□□□□□ -0.42
TGFBR3-201ENST00000212355 ADAM5Q6NVV9 412 aa12.44□□□□□ -0.42
TGFBR3-201ENST00000212355 SLC6A13Q9NSD5 602 aa12.44□□□□□ -0.42
TGFBR3-201ENST00000212355 FZR1Q9UM11 496 aa12.44□□□□□ -0.42
TGFBR3-201ENST00000212355 KCNE3Q9Y6H6 103 aa12.44□□□□□ -0.42
TGFBR3-201ENST00000212355 ZNF587BE7ETH6 402 aa12.44□□□□□ -0.42
TGFBR3-201ENST00000212355 PPM1DO15297 605 aa12.44□□□□□ -0.42
TGFBR3-201ENST00000212355 PRSS12P56730 875 aa12.44□□□□□ -0.42
TGFBR3-201ENST00000212355 GDPD3Q7L5L3 318 aa12.44□□□□□ -0.42
TGFBR3-201ENST00000212355 DPPA2Q7Z7J5 298 aa12.44□□□□□ -0.42
TGFBR3-201ENST00000212355 PTRH1Q86Y79 214 aaKnown RBP12.44□□□□□ -0.42
TGFBR3-201ENST00000212355 NECAP2Q9NVZ3 263 aa12.44□□□□□ -0.42
TGFBR3-201ENST00000212355 NUP205Q92621 2012 aa12.44□□□□□ -0.42
TGFBR3-201ENST00000212355 C5orf49A4QMS7 147 aa12.43□□□□□ -0.42
TGFBR3-201ENST00000212355 LINC01553A4QN01 128 aa12.43□□□□□ -0.42
TGFBR3-201ENST00000212355 D6RAR5 112 aa12.43□□□□□ -0.42
TGFBR3-201ENST00000212355 SLC31A2O15432 143 aa12.43□□□□□ -0.42
TGFBR3-201ENST00000212355 FPR3P25089 353 aa12.43□□□□□ -0.42
TGFBR3-201ENST00000212355 HOXA9P31269 272 aa12.43□□□□□ -0.42
TGFBR3-201ENST00000212355 SNCAP37840 140 aa12.43□□□□□ -0.42
TGFBR3-201ENST00000212355 YBX1P67809 324 aaKnown RBP12.43□□□□□ -0.42
TGFBR3-201ENST00000212355 PTCRAQ6ISU1 281 aaPredicted RBP12.43□□□□□ -0.42
TGFBR3-201ENST00000212355 OR4N2Q8NGD1 307 aa12.43□□□□□ -0.42
TGFBR3-201ENST00000212355 SPPL3Q8TCT6 385 aa12.43□□□□□ -0.42
TGFBR3-201ENST00000212355 YIPF5Q969M3 257 aa12.43□□□□□ -0.42
TGFBR3-201ENST00000212355 CSF3RQ99062 836 aa12.43□□□□□ -0.42
TGFBR3-201ENST00000212355 SDF2Q99470 211 aa12.43□□□□□ -0.42
TGFBR3-201ENST00000212355 ASH2LQ9UBL3 628 aa12.43□□□□□ -0.42
TGFBR3-201ENST00000212355 LOC107986453A0A1B0GWG9 222 aa12.43□□□□□ -0.42
TGFBR3-201ENST00000212355 GPR137BO60478 399 aa12.43□□□□□ -0.42
TGFBR3-201ENST00000212355 SOD1P00441 154 aa12.43□□□□□ -0.42
TGFBR3-201ENST00000212355 USP51Q70EK9 711 aa12.43□□□□□ -0.42
TGFBR3-201ENST00000212355 PGAP1Q75T13 922 aa12.43□□□□□ -0.42
TGFBR3-201ENST00000212355 UCN3Q969E3 161 aa12.43□□□□□ -0.42
TGFBR3-201ENST00000212355 HDAC8Q9BY41 377 aa12.43□□□□□ -0.42
TGFBR3-201ENST00000212355 CHST6Q9GZX3 395 aa12.43□□□□□ -0.42
TGFBR3-201ENST00000212355 ZNF576Q9H609 170 aa12.43□□□□□ -0.42
TGFBR3-201ENST00000212355 SDHAF2Q9NX18 166 aa12.43□□□□□ -0.42
TGFBR3-201ENST00000212355 H3BUI4 141 aa12.43□□□□□ -0.42
TGFBR3-201ENST00000212355 SPRY1O43609 319 aaPredicted RBP12.43□□□□□ -0.42
TGFBR3-201ENST00000212355 OR2J2O76002 312 aa12.43□□□□□ -0.42
TGFBR3-201ENST00000212355 CPT2P23786 658 aa12.43□□□□□ -0.42
TGFBR3-201ENST00000212355 OR2B8PP59922 312 aa12.43□□□□□ -0.42
TGFBR3-201ENST00000212355 SRSF5Q13243 272 aaKnown RBP12.43□□□□□ -0.42
TGFBR3-201ENST00000212355 EXOSC2Q13868 293 aaKnown RBP12.43□□□□□ -0.42
TGFBR3-201ENST00000212355 LCN15Q6UWW0 184 aa12.43□□□□□ -0.42
TGFBR3-201ENST00000212355 AGBL5Q8NDL9 886 aa12.43□□□□□ -0.42
TGFBR3-201ENST00000212355 EXOSC3Q9NQT5 275 aaKnown RBP12.43□□□□□ -0.42
TGFBR3-201ENST00000212355 ADAM29Q9UKF5 820 aa12.43□□□□□ -0.42
TGFBR3-201ENST00000212355 MOKQ9UQ07 419 aa12.43□□□□□ -0.42
TGFBR3-201ENST00000212355 OR51B4Q9Y5P0 310 aa12.43□□□□□ -0.42
TGFBR3-201ENST00000212355 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.43□□□□□ -0.42
TGFBR3-201ENST00000212355 BLACEA4D250 179 aa12.43□□□□□ -0.42
TGFBR3-201ENST00000212355 TAS2R30P59541 319 aa12.43□□□□□ -0.42
TGFBR3-201ENST00000212355 DEFA6Q01524 100 aa12.43□□□□□ -0.42
TGFBR3-201ENST00000212355 MSMO1Q15800 293 aa12.43□□□□□ -0.42
TGFBR3-201ENST00000212355 CXorf67Q86X51 503 aaPredicted RBP12.43□□□□□ -0.42
TGFBR3-201ENST00000212355 NAXDQ8IW45 347 aa12.43□□□□□ -0.42
TGFBR3-201ENST00000212355 CMTM4Q8IZR5 234 aa12.43□□□□□ -0.42
TGFBR3-201ENST00000212355 ZNF75AQ96N20 296 aa12.43□□□□□ -0.42
TGFBR3-201ENST00000212355 UHRF2Q96PU4 802 aa12.43□□□□□ -0.42
TGFBR3-201ENST00000212355 ARV1Q9H2C2 271 aa12.43□□□□□ -0.42
TGFBR3-201ENST00000212355 HEYLQ9NQ87 328 aaPredicted RBP12.43□□□□□ -0.42
TGFBR3-201ENST00000212355 SERTM2A0A1B0GWG4 89 aa12.43□□□□□ -0.42
TGFBR3-201ENST00000212355 TPOP07202 933 aa12.43□□□□□ -0.42
TGFBR3-201ENST00000212355 CD14P08571 375 aa12.43□□□□□ -0.42
TGFBR3-201ENST00000212355 SLC35E2P0CK97 266 aa12.43□□□□□ -0.42
TGFBR3-201ENST00000212355 ZXDAP98168 799 aa12.43□□□□□ -0.42
TGFBR3-201ENST00000212355 XKR7Q5GH72 579 aa12.43□□□□□ -0.42
TGFBR3-201ENST00000212355 RDH5Q92781 318 aa12.43□□□□□ -0.42
TGFBR3-201ENST00000212355 SLX4Q8IY92 1834 aa12.43□□□□□ -0.42
TGFBR3-201ENST00000212355 ST6GAL1P15907 406 aa12.43□□□□□ -0.42
TGFBR3-201ENST00000212355 SYT6Q5T7P8 510 aaPredicted RBP12.43□□□□□ -0.42
TGFBR3-201ENST00000212355 METRNLQ641Q3 311 aa12.43□□□□□ -0.42
TGFBR3-201ENST00000212355 BPIFCQ8NFQ6 507 aa12.43□□□□□ -0.42
TGFBR3-201ENST00000212355 KCNG3Q8TAE7 436 aa12.43□□□□□ -0.42
TGFBR3-201ENST00000212355 ADAM19Q9H013 955 aa12.43□□□□□ -0.42
TGFBR3-201ENST00000212355 ZNF768Q9H5H4 540 aaKnown RBP12.43□□□□□ -0.42
TGFBR3-201ENST00000212355 SLC23A1Q9UHI7 598 aa12.43□□□□□ -0.42
TGFBR3-201ENST00000212355 KLK4Q9Y5K2 254 aa12.43□□□□□ -0.42
TGFBR3-201ENST00000212355 AIPO00170 330 aa12.42□□□□□ -0.42
TGFBR3-201ENST00000212355 TOX4O94842 621 aa12.42□□□□□ -0.42
TGFBR3-201ENST00000212355 ARL6IP1Q15041 203 aa12.42□□□□□ -0.42
TGFBR3-201ENST00000212355 SHHQ15465 462 aa12.42□□□□□ -0.42
TGFBR3-201ENST00000212355 KHDC1LQ5JSQ8 128 aa12.42□□□□□ -0.42
TGFBR3-201ENST00000212355 IFI44Q8TCB0 444 aa12.42□□□□□ -0.42
TGFBR3-201ENST00000212355 PIGQQ9BRB3 760 aa12.42□□□□□ -0.42
TGFBR3-201ENST00000212355 CCR2P41597 374 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms