RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 KCTD20Q7Z5Y7 419 aa17.49■□□□□ 0.39
TNFRSF1A-201ENST00000162749 TMEM178AQ8NBL3 297 aa17.49■□□□□ 0.39
TNFRSF1A-201ENST00000162749 DIRAS2Q96HU8 199 aa17.49■□□□□ 0.39
TNFRSF1A-201ENST00000162749 PHYHO14832 338 aa17.48■□□□□ 0.39
TNFRSF1A-201ENST00000162749 NCR1O76036 304 aa17.48■□□□□ 0.39
TNFRSF1A-201ENST00000162749 LHX2P50458 406 aa17.48■□□□□ 0.39
TNFRSF1A-201ENST00000162749 DDI2Q5TDH0 399 aa17.48■□□□□ 0.39
TNFRSF1A-201ENST00000162749 LIPNQ5VXI9 398 aa17.48■□□□□ 0.39
TNFRSF1A-201ENST00000162749 LRRC69Q6ZNQ3 347 aa17.48■□□□□ 0.39
TNFRSF1A-201ENST00000162749 FAM220AQ7Z4H9 259 aa17.48■□□□□ 0.39
TNFRSF1A-201ENST00000162749 NEIL3Q8TAT5 605 aa17.48■□□□□ 0.39
TNFRSF1A-201ENST00000162749 HSD17B8Q92506 261 aa17.48■□□□□ 0.39
TNFRSF1A-201ENST00000162749 RTTNQ86VV8 2226 aa17.48■□□□□ 0.39
TNFRSF1A-201ENST00000162749 UPK3AO75631 287 aa17.48■□□□□ 0.39
TNFRSF1A-201ENST00000162749 RGS9O75916 674 aaPredicted RBP17.48■□□□□ 0.39
TNFRSF1A-201ENST00000162749 APOA1P02647 267 aa17.48■□□□□ 0.39
TNFRSF1A-201ENST00000162749 KRT8P05787 483 aa17.48■□□□□ 0.39
TNFRSF1A-201ENST00000162749 RFX2P48378 723 aa17.48■□□□□ 0.39
TNFRSF1A-201ENST00000162749 GDI2P50395 445 aaKnown RBP17.48■□□□□ 0.39
TNFRSF1A-201ENST00000162749 PPIAP62937 165 aaKnown RBP17.48■□□□□ 0.39
TNFRSF1A-201ENST00000162749 NRARPQ7Z6K4 114 aa17.48■□□□□ 0.39
TNFRSF1A-201ENST00000162749 GLB1L2Q8IW92 636 aa17.48■□□□□ 0.39
TNFRSF1A-201ENST00000162749 IL17RDQ8NFM7 739 aa17.48■□□□□ 0.39
TNFRSF1A-201ENST00000162749 SETD6Q8TBK2 473 aa17.48■□□□□ 0.39
TNFRSF1A-201ENST00000162749 AP3S1Q92572 193 aa17.48■□□□□ 0.39
TNFRSF1A-201ENST00000162749 MCHR2Q969V1 340 aa17.48■□□□□ 0.39
TNFRSF1A-201ENST00000162749 SF3B5Q9BWJ5 86 aaKnown RBP17.48■□□□□ 0.39
TNFRSF1A-201ENST00000162749 KLHL9Q9P2J3 617 aa17.48■□□□□ 0.39
TNFRSF1A-201ENST00000162749 IKZF2Q9UKS7 526 aa17.48■□□□□ 0.39
TNFRSF1A-201ENST00000162749 PIEZO1Q92508 2521 aa17.47■□□□□ 0.39
TNFRSF1A-201ENST00000162749 SVILO95425 2214 aa17.47■□□□□ 0.39
TNFRSF1A-201ENST00000162749 TRBV2A0A0J9YWF9 115 aa17.47■□□□□ 0.39
TNFRSF1A-201ENST00000162749 FABP12A6NFH5 140 aa17.47■□□□□ 0.39
TNFRSF1A-201ENST00000162749 KLK10O43240 276 aa17.47■□□□□ 0.39
TNFRSF1A-201ENST00000162749 SC5DO75845 299 aa17.47■□□□□ 0.39
TNFRSF1A-201ENST00000162749 HRGP04196 525 aa17.47■□□□□ 0.39
TNFRSF1A-201ENST00000162749 TACSTD2P09758 323 aa17.47■□□□□ 0.39
TNFRSF1A-201ENST00000162749 CLDN18P56856 261 aa17.47■□□□□ 0.39
TNFRSF1A-201ENST00000162749 NANOS3P60323 173 aaKnown RBP17.47■□□□□ 0.39
TNFRSF1A-201ENST00000162749 TRAM1Q15629 374 aa17.47■□□□□ 0.39
TNFRSF1A-201ENST00000162749 PCK2Q16822 640 aa17.47■□□□□ 0.39
TNFRSF1A-201ENST00000162749 SLC18B1Q6NT16 456 aa17.47■□□□□ 0.39
TNFRSF1A-201ENST00000162749 YIPF7Q8N8F6 280 aa17.47■□□□□ 0.39
TNFRSF1A-201ENST00000162749 ZIC4Q8N9L1 334 aa17.47■□□□□ 0.39
TNFRSF1A-201ENST00000162749 RPS4Y2Q8TD47 263 aa17.47■□□□□ 0.39
TNFRSF1A-201ENST00000162749 ZNF845Q96IR2 970 aaPredicted RBP17.47■□□□□ 0.39
TNFRSF1A-201ENST00000162749 NEDD4LQ96PU5 975 aa17.47■□□□□ 0.39
TNFRSF1A-201ENST00000162749 ATF6BQ99941 703 aa17.47■□□□□ 0.39
TNFRSF1A-201ENST00000162749 A0A1W2PQ09 198 aa17.47■□□□□ 0.39
TNFRSF1A-201ENST00000162749 CEACAM4O75871 244 aa17.47■□□□□ 0.39
TNFRSF1A-201ENST00000162749 EDNRAP25101 427 aa17.47■□□□□ 0.39
TNFRSF1A-201ENST00000162749 TPTEP56180 551 aa17.47■□□□□ 0.39
TNFRSF1A-201ENST00000162749 XKRXQ6PP77 449 aa17.47■□□□□ 0.39
TNFRSF1A-201ENST00000162749 MS4A15Q8N5U1 240 aa17.47■□□□□ 0.39
TNFRSF1A-201ENST00000162749 CPNE4Q96A23 557 aaPredicted RBP17.47■□□□□ 0.39
TNFRSF1A-201ENST00000162749 OR2M2Q96R28 347 aa17.47■□□□□ 0.39
TNFRSF1A-201ENST00000162749 PDCD1LG2Q9BQ51 273 aa17.47■□□□□ 0.39
TNFRSF1A-201ENST00000162749 KCNN2Q9H2S1 579 aa17.47■□□□□ 0.39
TNFRSF1A-201ENST00000162749 SLCO1C1Q9NYB5 712 aa17.47■□□□□ 0.39
TNFRSF1A-201ENST00000162749 COMMD3Q9UBI1 195 aa17.47■□□□□ 0.39
TNFRSF1A-201ENST00000162749 ZNF716A6NP11 495 aa17.46■□□□□ 0.39
TNFRSF1A-201ENST00000162749 TLX3O43711 291 aaPredicted RBP17.46■□□□□ 0.39
TNFRSF1A-201ENST00000162749 ZNF432O94892 652 aa17.46■□□□□ 0.39
TNFRSF1A-201ENST00000162749 RPP14O95059 124 aaKnown RBP17.46■□□□□ 0.39
TNFRSF1A-201ENST00000162749 ZNF823P16415 610 aa17.46■□□□□ 0.39
TNFRSF1A-201ENST00000162749 ZNF708P17019 499 aa17.46■□□□□ 0.39
TNFRSF1A-201ENST00000162749 RNFT1Q5M7Z0 435 aa17.46■□□□□ 0.39
TNFRSF1A-201ENST00000162749 ABLIM2Q6H8Q1 611 aa17.46■□□□□ 0.39
TNFRSF1A-201ENST00000162749 LRFN4Q6PJG9 635 aa17.46■□□□□ 0.39
TNFRSF1A-201ENST00000162749 FAM109AQ8N4B1 249 aa17.46■□□□□ 0.39
TNFRSF1A-201ENST00000162749 OR13C5Q8NGS8 318 aa17.46■□□□□ 0.39
TNFRSF1A-201ENST00000162749 ABHD4Q8TB40 342 aa17.46■□□□□ 0.39
TNFRSF1A-201ENST00000162749 ASB17Q8WXJ9 295 aa17.46■□□□□ 0.39
TNFRSF1A-201ENST00000162749 ROBO4Q8WZ75 1007 aa17.46■□□□□ 0.39
TNFRSF1A-201ENST00000162749 OR8B4Q96RC9 309 aa17.46■□□□□ 0.39
TNFRSF1A-201ENST00000162749 TTYH2Q9BSA4 534 aa17.46■□□□□ 0.39
TNFRSF1A-201ENST00000162749 ABHD6Q9BV23 337 aa17.46■□□□□ 0.39
TNFRSF1A-201ENST00000162749 SCNM1Q9BWG6 230 aa17.46■□□□□ 0.39
TNFRSF1A-201ENST00000162749 WNT11O96014 354 aa17.45■□□□□ 0.38
TNFRSF1A-201ENST00000162749 ITGB2P05107 769 aa17.45■□□□□ 0.38
TNFRSF1A-201ENST00000162749 QDPRP09417 244 aa17.45■□□□□ 0.38
TNFRSF1A-201ENST00000162749 CSF3P09919 207 aa17.45■□□□□ 0.38
TNFRSF1A-201ENST00000162749 LAP3P28838 519 aa17.45■□□□□ 0.38
TNFRSF1A-201ENST00000162749 MADCAM1Q13477 382 aa17.45■□□□□ 0.38
TNFRSF1A-201ENST00000162749 TEX30Q5JUR7 227 aa17.45■□□□□ 0.38
TNFRSF1A-201ENST00000162749 SLC25A47Q6Q0C1 308 aa17.45■□□□□ 0.38
TNFRSF1A-201ENST00000162749 LRRN1Q6UXK5 716 aa17.45■□□□□ 0.38
TNFRSF1A-201ENST00000162749 NR2C2APQ86WQ0 139 aa17.45■□□□□ 0.38
TNFRSF1A-201ENST00000162749 TMEM123Q8N131 208 aa17.45■□□□□ 0.38
TNFRSF1A-201ENST00000162749 ZNF454Q8N9F8 522 aa17.45■□□□□ 0.38
TNFRSF1A-201ENST00000162749 PPIL3Q9H2H8 161 aaKnown RBP17.45■□□□□ 0.38
TNFRSF1A-201ENST00000162749 ACKR4Q9NPB9 350 aa17.45■□□□□ 0.38
TNFRSF1A-201ENST00000162749 FLVCR1Q9Y5Y0 555 aa17.45■□□□□ 0.38
TNFRSF1A-201ENST00000162749 CD1AP06126 327 aa17.45■□□□□ 0.38
TNFRSF1A-201ENST00000162749 SELENOPP49908 381 aa17.45■□□□□ 0.38
TNFRSF1A-201ENST00000162749 RPS11P62280 158 aaKnown RBP eCLIP17.45■□□□□ 0.38
TNFRSF1A-201ENST00000162749 ROM1Q03395 351 aa17.45■□□□□ 0.38
TNFRSF1A-201ENST00000162749 EIF2B1Q14232 305 aaKnown RBP17.45■□□□□ 0.38
TNFRSF1A-201ENST00000162749 ZNF679Q8IYX0 411 aa17.45■□□□□ 0.38
TNFRSF1A-201ENST00000162749 C11orf40Q8WZ69 217 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 122.8 ms