RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Olfr895L7N210 316 aa15.4■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Nol4lQ6DIB4 494 aa15.4■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 SuoxQ8R086 546 aa15.4■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Chrnb4Q8R493 495 aa15.4■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Rnf167Q91XF4 347 aa15.4■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Pard6gQ9JK84 382 aa15.4■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Olfr917Q7TRC3 309 aa15.4■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Olfr1501Q8VFQ3 315 aa15.4■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Nxt1Q9QZV9 140 aa15.4■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Zfp980A2A9J5 645 aa15.4■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Muc3E9PWP7 378 aa15.4■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 DdostO54734 441 aa15.4■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Ptpmt1Q66GT5 193 aa15.4■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Dcaf13Q6PAC3 445 aaKnown RBP15.4■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Mrpl22Q8BU88 206 aaKnown RBP15.4■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Q91V76 315 aa15.4■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Rab5aQ9CQD1 215 aa15.4■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Lamtor5Q9D1L9 91 aa15.4■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Slc23a4A0A0J9YUX7 615 aa15.4■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Gm13420A0A140LJJ2 248 aa15.4■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Ctxn2Q3URE8 81 aa15.4■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Sohlh1Q6IUP1 357 aa15.4■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 SpicQ6P3D7 242 aa15.4■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Olfr657Q7TRP7 319 aa15.4■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Vmn1r42Q8VBS7 329 aa15.4■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Olfr649Q8VGW1 312 aa15.4■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Vmn1r44Q9EQ47 310 aa15.4■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Vstm2bQ9JME9 285 aa15.4■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Gm20828J3KMI7 228 aa15.4■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Cd300lfQ6SJQ7 337 aa15.4■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Slc22a27Q76M72 551 aa15.4■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 B630019K06RikQ7TNS5 333 aa15.4■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 TigarQ8BZA9 269 aa15.4■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Olfr57Q8VGU7 319 aa15.4■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Rbms1Q91W59 403 aaKnown RBP15.4■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Gfra4Q9JJT2 260 aa15.4■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Abhd16aQ9Z1Q2 558 aa15.4■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Dnajb3O35723 242 aa15.4■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Syngr1O55100 234 aa15.4■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 TyrP11344 533 aa15.4■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Olfr323Q5NCD0 323 aa15.4■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Vmn1r208Q8R275 308 aa15.4■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 CytipQ91VY6 359 aa15.4■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Mob1aQ921Y0 216 aa15.4■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 PacrgQ9DAK2 241 aa15.4■□□□□ 0.06
Ccdc88a-201ENSMUST00000040182 Ndor1A2AI05 598 aa15.39■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 FhitO89106 150 aa15.39■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 RelP15307 587 aa15.39■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Ranbp3lQ6PDH4 491 aa15.39■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Otop2Q80SX5 563 aa15.39■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Banf2Q8BVR0 90 aa15.39■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Foxe1Q8R2I0 371 aa15.39■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 B3GNT2Q9Z222 397 aa15.39■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 4930595M18RikA2RRY9 829 aa15.39■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Slc38a6G3UVW3 457 aa15.39■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Gm4141K9J7H2 306 aa15.39■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Sec61a1P61620 476 aaKnown RBP15.39■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Olfr314Q7TRZ7 330 aa15.39■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Tmem175Q9CXY1 499 aa15.39■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 IL36RNQ9QYY1 156 aa15.39■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Prdx4O08807 274 aaKnown RBP15.39■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Il5raP21183 415 aa15.39■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Fam57bQ7TNV1 275 aa15.39■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Olfr1241Q8VF91 314 aa15.39■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Fut2Q9JL27 347 aa15.39■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Dock2Q8C3J5 1828 aa15.39■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Rpl3lE9PWZ3 407 aa15.39■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Gm9125P0DMR6 365 aa15.39■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Zfp157Q6PCM4 567 aa15.39■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Mrps10Q80ZK0 160 aaKnown RBP15.39■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Raf1Q99N57 648 aa15.39■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Vmn1r65Q9EPS7 332 aa15.39■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Dll4Q9JI71 686 aa15.39■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Bcl9lQ67FY2 1494 aa15.39■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Olfr1066A2AK62 313 aa15.39■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Opn5Q6VZZ7 377 aa15.39■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Agfg1Q8K2K6 561 aa15.39■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Ccdc115Q8VE99 180 aaKnown RBP15.39■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Olfr469Q8VF66 314 aa15.39■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Tmem239Q9DA47 151 aa15.39■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Rab8bP61028 207 aa15.39■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Htr2bQ02152 479 aa15.39■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 DmwdQ08274 665 aa15.39■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 E2f1Q61501 430 aa15.39■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Q80W69 301 aa15.39■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Slc35c1Q8BLX4 363 aa15.39■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 P2ry10bQ8BY68 352 aa15.39■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Olfr398Q8VFY0 314 aa15.39■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Olfr969Q8VG89 311 aa15.39■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Gm9964E9Q9S5 144 aa15.39■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Sub1P11031 127 aaKnown RBP15.39■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Olfr366Q7TRY4 309 aa15.39■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Reep4Q8K072 257 aa15.39■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Btbd35f30J3QML3 498 aa15.38■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Btbd35f22J3QN64 498 aa15.38■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Crmp1P97427 572 aa15.38■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Olfr598Q7TRR2 319 aa15.38■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Rnf24Q8BGI1 148 aa15.38■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 PolmQ9JIW4 496 aa15.38■□□□□ 0.05
Ccdc88a-201ENSMUST00000040182 Tmed7D3YZZ5 224 aa15.38■□□□□ 0.05
Retrieved 100 of 22,080 RNA–protein pairs in 79.1 ms