RNA–Protein interactions for RNA: ENSMUST00000033088.7

Rnf40-201, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-201ENSMUST00000033088 Synpo2lQ8BWB1 975 aa9.82□□□□□ -0.84
Rnf40-201ENSMUST00000033088 Spp2Q8K1I3 203 aa9.82□□□□□ -0.84
Rnf40-201ENSMUST00000033088 Olfr291Q8VF60 317 aa9.82□□□□□ -0.84
Rnf40-201ENSMUST00000033088 Olfr1501Q8VFQ3 315 aa9.82□□□□□ -0.84
Rnf40-201ENSMUST00000033088 Glyr1Q922P9 546 aaKnown RBP9.82□□□□□ -0.84
Rnf40-201ENSMUST00000033088 Cyp2u1Q9CX98 530 aa9.82□□□□□ -0.84
Rnf40-201ENSMUST00000033088 9230112D13RikQ9D260 137 aa9.82□□□□□ -0.84
Rnf40-201ENSMUST00000033088 Exosc8Q9D753 276 aaKnown RBP9.82□□□□□ -0.84
Rnf40-201ENSMUST00000033088 Tmem239Q9DA47 151 aa9.82□□□□□ -0.84
Rnf40-201ENSMUST00000033088 Ap1s2Q9DB50 160 aa9.82□□□□□ -0.84
Rnf40-201ENSMUST00000033088 Suv39h2Q9EQQ0 477 aa9.82□□□□□ -0.84
Rnf40-201ENSMUST00000033088 ThadaA8C756 1938 aa9.82□□□□□ -0.84
Rnf40-201ENSMUST00000033088 Gm44973A0A140LJJ1 189 aa9.82□□□□□ -0.84
Rnf40-201ENSMUST00000033088 Znf551B2RUI1 696 aa9.82□□□□□ -0.84
Rnf40-201ENSMUST00000033088 Zfp758E9QAA1 583 aa9.82□□□□□ -0.84
Rnf40-201ENSMUST00000033088 Gm37240E9QAY5 252 aa9.82□□□□□ -0.84
Rnf40-201ENSMUST00000033088 Camk2aP11798 478 aa9.82□□□□□ -0.84
Rnf40-201ENSMUST00000033088 Igfbp3P47878 292 aa9.82□□□□□ -0.84
Rnf40-201ENSMUST00000033088 Actc1P68033 377 aa9.82□□□□□ -0.84
Rnf40-201ENSMUST00000033088 Acta1P68134 377 aa9.82□□□□□ -0.84
Rnf40-201ENSMUST00000033088 Bbs12Q5SUD9 708 aa9.82□□□□□ -0.84
Rnf40-201ENSMUST00000033088 Prg2Q61878 223 aa9.82□□□□□ -0.84
Rnf40-201ENSMUST00000033088 Taf6Q62311 678 aaKnown RBP9.82□□□□□ -0.84
Rnf40-201ENSMUST00000033088 Kcnc3Q63959 769 aa9.82□□□□□ -0.84
Rnf40-201ENSMUST00000033088 BocQ6AZB0 1110 aa9.82□□□□□ -0.84
Rnf40-201ENSMUST00000033088 Avl9Q80U56 649 aa9.82□□□□□ -0.84
Rnf40-201ENSMUST00000033088 Pamr1Q8BU25 720 aa9.82□□□□□ -0.84
Rnf40-201ENSMUST00000033088 Gm11541Q8C4D8 108 aa9.82□□□□□ -0.84
Rnf40-201ENSMUST00000033088 Mboat2Q8R3I2 519 aa9.82□□□□□ -0.84
Rnf40-201ENSMUST00000033088 Ackr4Q924I3 350 aa9.82□□□□□ -0.84
Rnf40-201ENSMUST00000033088 Znf524Q9D0B1 321 aa9.82□□□□□ -0.84
Rnf40-201ENSMUST00000033088 Obp1aQ9D3H2 163 aa9.82□□□□□ -0.84
Rnf40-201ENSMUST00000033088 SigirrQ9JLZ8 409 aa9.82□□□□□ -0.84
Rnf40-201ENSMUST00000033088 Cml5Q9QXS8 227 aa9.82□□□□□ -0.84
Rnf40-201ENSMUST00000033088 Gm14862B1AV28 81 aa9.82□□□□□ -0.84
Rnf40-201ENSMUST00000033088 Gm5475D3YV11 175 aa9.82□□□□□ -0.84
Rnf40-201ENSMUST00000033088 Slc16a5G5E8K6 468 aa9.82□□□□□ -0.84
Rnf40-201ENSMUST00000033088 MstnO08689 376 aa9.82□□□□□ -0.84
Rnf40-201ENSMUST00000033088 Hnf1aP22361 628 aa9.82□□□□□ -0.84
Rnf40-201ENSMUST00000033088 Cxcl5P50228 132 aa9.82□□□□□ -0.84
Rnf40-201ENSMUST00000033088 Map2k6P70236 334 aaKnown RBP9.82□□□□□ -0.84
Rnf40-201ENSMUST00000033088 Znf235Q61116 645 aa9.82□□□□□ -0.84
Rnf40-201ENSMUST00000033088 Ift52Q62559 426 aa9.82□□□□□ -0.84
Rnf40-201ENSMUST00000033088 March1Q6NZQ8 289 aa9.82□□□□□ -0.84
Rnf40-201ENSMUST00000033088 C8bQ8BH35 589 aa9.82□□□□□ -0.84
Rnf40-201ENSMUST00000033088 Znf2Q8BIQ3 427 aa9.82□□□□□ -0.84
Rnf40-201ENSMUST00000033088 Nyap2Q8BM65 682 aa9.82□□□□□ -0.84
Rnf40-201ENSMUST00000033088 Q8BN57 294 aa9.82□□□□□ -0.84
Rnf40-201ENSMUST00000033088 Rnf208Q8K0W3 265 aa9.82□□□□□ -0.84
Rnf40-201ENSMUST00000033088 Ctrb1Q9CR35 263 aa9.82□□□□□ -0.84
Rnf40-201ENSMUST00000033088 Rep15Q9D7T1 230 aa9.82□□□□□ -0.84
Rnf40-201ENSMUST00000033088 Tas2r4Q9JKT3 297 aa9.82□□□□□ -0.84
Rnf40-201ENSMUST00000033088 Clec4dQ9Z2H6 219 aa9.82□□□□□ -0.84
Rnf40-201ENSMUST00000033088 SktA2AQ25 1946 aaKnown RBP9.82□□□□□ -0.84
Rnf40-201ENSMUST00000033088 SpxD3Z752 116 aa9.81□□□□□ -0.84
Rnf40-201ENSMUST00000033088 Kcnmb3E9Q7U0 239 aa9.81□□□□□ -0.84
Rnf40-201ENSMUST00000033088 Kcne1P23299 129 aa9.81□□□□□ -0.84
Rnf40-201ENSMUST00000033088 Adra2cQ01337 458 aa9.81□□□□□ -0.84
Rnf40-201ENSMUST00000033088 Tmem38aQ3TMP8 298 aa9.81□□□□□ -0.84
Rnf40-201ENSMUST00000033088 Apcdd1Q3U128 514 aa9.81□□□□□ -0.84
Rnf40-201ENSMUST00000033088 N4bp2l1Q3V2Q8 238 aa9.81□□□□□ -0.84
Rnf40-201ENSMUST00000033088 Olfr328Q5NCD3 310 aa9.81□□□□□ -0.84
Rnf40-201ENSMUST00000033088 Jagn1Q5XKN4 183 aa9.81□□□□□ -0.84
Rnf40-201ENSMUST00000033088 Csnk2a1Q60737 391 aaKnown RBP9.81□□□□□ -0.84
Rnf40-201ENSMUST00000033088 Olfr1045Q7TR80 315 aa9.81□□□□□ -0.84
Rnf40-201ENSMUST00000033088 Spata7Q80VP2 582 aa9.81□□□□□ -0.84
Rnf40-201ENSMUST00000033088 Shc2Q8BMC3 573 aa9.81□□□□□ -0.84
Rnf40-201ENSMUST00000033088 Lmf2Q8C3X8 702 aaKnown RBP9.81□□□□□ -0.84
Rnf40-201ENSMUST00000033088 Amdhd2Q8JZV7 409 aa9.81□□□□□ -0.84
Rnf40-201ENSMUST00000033088 ApehQ8R146 732 aa9.81□□□□□ -0.84
Rnf40-201ENSMUST00000033088 D8Ertd738eQ8R1F0 94 aa9.81□□□□□ -0.84
Rnf40-201ENSMUST00000033088 Tmem106aQ8VC04 261 aa9.81□□□□□ -0.84
Rnf40-201ENSMUST00000033088 Spryd4Q91WK1 207 aa9.81□□□□□ -0.84
Rnf40-201ENSMUST00000033088 DynapQ9D7M5 161 aa9.81□□□□□ -0.84
Rnf40-201ENSMUST00000033088 1700020A23RikQ9DA59 131 aa9.81□□□□□ -0.84
Rnf40-201ENSMUST00000033088 HpgdsQ9JHF7 199 aa9.81□□□□□ -0.84
Rnf40-201ENSMUST00000033088 TollipQ9QZ06 274 aa9.81□□□□□ -0.84
Rnf40-201ENSMUST00000033088 Olfr159Q9QZ19 319 aa9.81□□□□□ -0.84
Rnf40-201ENSMUST00000033088 Lhx6Q9R1R0 363 aa9.81□□□□□ -0.84
Rnf40-201ENSMUST00000033088 Lbx2Q9WUN8 195 aa9.81□□□□□ -0.84
Rnf40-201ENSMUST00000033088 Padi1Q9Z185 662 aa9.81□□□□□ -0.84
Rnf40-201ENSMUST00000033088 Olfr1555-ps1A0A140LHT7 321 aa9.81□□□□□ -0.84
Rnf40-201ENSMUST00000033088 SvaE9PX96 165 aa9.81□□□□□ -0.84
Rnf40-201ENSMUST00000033088 AF067061O70616 171 aa9.81□□□□□ -0.84
Rnf40-201ENSMUST00000033088 Hdac3O88895 424 aa9.81□□□□□ -0.84
Rnf40-201ENSMUST00000033088 Csn2P10598 231 aa9.81□□□□□ -0.84
Rnf40-201ENSMUST00000033088 EpxP49290 716 aa9.81□□□□□ -0.84
Rnf40-201ENSMUST00000033088 Fmo1P50285 532 aa9.81□□□□□ -0.84
Rnf40-201ENSMUST00000033088 RoraP51448 523 aa9.81□□□□□ -0.84
Rnf40-201ENSMUST00000033088 Idh3gP70404 393 aa9.81□□□□□ -0.84
Rnf40-201ENSMUST00000033088 Ceacam19Q3TQ88 271 aa9.81□□□□□ -0.84
Rnf40-201ENSMUST00000033088 Camk2dQ6PHZ2 499 aa9.81□□□□□ -0.84
Rnf40-201ENSMUST00000033088 Kiaa0895Q7TQE7 519 aa9.81□□□□□ -0.84
Rnf40-201ENSMUST00000033088 Stk17bQ8BG48 372 aa9.81□□□□□ -0.84
Rnf40-201ENSMUST00000033088 Cdkl1Q8CEQ0 352 aa9.81□□□□□ -0.84
Rnf40-201ENSMUST00000033088 Vmn1r87Q8R255 295 aa9.81□□□□□ -0.84
Rnf40-201ENSMUST00000033088 Olfr446Q8VEV0 308 aa9.81□□□□□ -0.84
Rnf40-201ENSMUST00000033088 OgfrQ99PG2 633 aa9.81□□□□□ -0.84
Rnf40-201ENSMUST00000033088 Hcfc1r1Q9CYQ5 120 aa9.81□□□□□ -0.84
Rnf40-201ENSMUST00000033088 Psmb3Q9R1P1 205 aa9.81□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 45.5 ms