RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 CfhP06909 1234 aa12.98□□□□□ -0.33
Col5a1-201ENSMUST00000028280 Ap1g1P22892 822 aa12.98□□□□□ -0.33
Col5a1-201ENSMUST00000028280 Cdk5P49615 292 aa12.98□□□□□ -0.33
Col5a1-201ENSMUST00000028280 DbpQ60925 325 aa12.98□□□□□ -0.33
Col5a1-201ENSMUST00000028280 Lpar4Q8BLG2 370 aa12.98□□□□□ -0.33
Col5a1-201ENSMUST00000028280 Fam103a1Q9CQY2 119 aaKnown RBP12.98□□□□□ -0.33
Col5a1-201ENSMUST00000028280 Slc2a8Q9JIF3 477 aa12.98□□□□□ -0.33
Col5a1-201ENSMUST00000028280 Npas3Q9QZQ0 925 aa12.98□□□□□ -0.33
Col5a1-201ENSMUST00000028280 PikfyveQ9Z1T6 2097 aa12.98□□□□□ -0.33
Col5a1-201ENSMUST00000028280 Epha4Q03137 986 aa12.98□□□□□ -0.33
Col5a1-201ENSMUST00000028280 InhbbQ04999 411 aa12.98□□□□□ -0.33
Col5a1-201ENSMUST00000028280 Ska3Q8C263 411 aa12.98□□□□□ -0.33
Col5a1-201ENSMUST00000028280 Sucnr1Q99MT6 317 aa12.98□□□□□ -0.33
Col5a1-201ENSMUST00000028280 Ankrd16A2AS55 361 aa12.98□□□□□ -0.33
Col5a1-201ENSMUST00000028280 Sqstm1Q64337 442 aaKnown RBP12.98□□□□□ -0.33
Col5a1-201ENSMUST00000028280 Olfr503Q7TRU8 323 aa12.98□□□□□ -0.33
Col5a1-201ENSMUST00000028280 Hcar1Q8C131 343 aa12.98□□□□□ -0.33
Col5a1-201ENSMUST00000028280 Mmgt2Q8R3L0 123 aa12.98□□□□□ -0.33
Col5a1-201ENSMUST00000028280 Acaa1bQ8VCH0 424 aa12.98□□□□□ -0.33
Col5a1-201ENSMUST00000028280 Acaa1aQ921H8 424 aaKnown RBP12.98□□□□□ -0.33
Col5a1-201ENSMUST00000028280 Rab27bQ99P58 218 aa12.98□□□□□ -0.33
Col5a1-201ENSMUST00000028280 Cdca5Q9CPY3 264 aa12.98□□□□□ -0.33
Col5a1-201ENSMUST00000028280 Yif1bQ9CX30 311 aa12.98□□□□□ -0.33
Col5a1-201ENSMUST00000028280 Yae1d1Q9DAY6 216 aa12.98□□□□□ -0.33
Col5a1-201ENSMUST00000028280 Timm9Q9WV98 89 aaKnown RBP12.98□□□□□ -0.33
Col5a1-201ENSMUST00000028280 Ifna1P01572 189 aa12.98□□□□□ -0.33
Col5a1-201ENSMUST00000028280 Alg6Q3TAE8 507 aa12.98□□□□□ -0.33
Col5a1-201ENSMUST00000028280 DtlQ3TLR7 729 aa12.98□□□□□ -0.33
Col5a1-201ENSMUST00000028280 Kyat3Q71RI9 455 aa12.98□□□□□ -0.33
Col5a1-201ENSMUST00000028280 Cdkn3Q810P3 211 aa12.98□□□□□ -0.33
Col5a1-201ENSMUST00000028280 Ubac2Q8R1K1 345 aa12.98□□□□□ -0.33
Col5a1-201ENSMUST00000028280 CutcQ9D8X1 272 aa12.98□□□□□ -0.33
Col5a1-201ENSMUST00000028280 Olfr914E9PW59 316 aa12.98□□□□□ -0.33
Col5a1-201ENSMUST00000028280 Gm10719E9Q7T3 227 aa12.98□□□□□ -0.33
Col5a1-201ENSMUST00000028280 SnrpbP27048 231 aaKnown RBP12.98□□□□□ -0.33
Col5a1-201ENSMUST00000028280 Olfr1212Q7TR08 311 aa12.98□□□□□ -0.33
Col5a1-201ENSMUST00000028280 Reps2Q80XA6 521 aa12.98□□□□□ -0.33
Col5a1-201ENSMUST00000028280 Sh2d7Q8BI17 458 aa12.98□□□□□ -0.33
Col5a1-201ENSMUST00000028280 NpntQ91V88 561 aa12.98□□□□□ -0.33
Col5a1-201ENSMUST00000028280 Cwh43Q91YL7 699 aa12.98□□□□□ -0.33
Col5a1-201ENSMUST00000028280 Ankrd34aB2RW11 495 aa12.98□□□□□ -0.33
Col5a1-201ENSMUST00000028280 Gm21767J3QPV5 180 aa12.98□□□□□ -0.33
Col5a1-201ENSMUST00000028280 Gm15292L7N231 93 aa12.98□□□□□ -0.33
Col5a1-201ENSMUST00000028280 Gpr25P0C5I1 358 aa12.98□□□□□ -0.33
Col5a1-201ENSMUST00000028280 AstlQ6HA09 435 aa12.98□□□□□ -0.33
Col5a1-201ENSMUST00000028280 Orai1Q8BWG9 304 aa12.98□□□□□ -0.33
Col5a1-201ENSMUST00000028280 Olfr780Q8VEU0 312 aa12.98□□□□□ -0.33
Col5a1-201ENSMUST00000028280 Psg23Q9D2U0 471 aa12.98□□□□□ -0.33
Col5a1-201ENSMUST00000028280 Psg21Q9DAV5 471 aa12.98□□□□□ -0.33
Col5a1-201ENSMUST00000028280 PollQ9QXE2 573 aaKnown RBP12.98□□□□□ -0.33
Col5a1-201ENSMUST00000028280 Vmn2r88L7N1W8 857 aa12.98□□□□□ -0.33
Col5a1-201ENSMUST00000028280 Hrh1P70174 488 aa12.98□□□□□ -0.33
Col5a1-201ENSMUST00000028280 Fahd2Q3TC72 313 aa12.98□□□□□ -0.33
Col5a1-201ENSMUST00000028280 Olfr70Q80ZX9 316 aa12.98□□□□□ -0.33
Col5a1-201ENSMUST00000028280 Eif4e2Q8BMB3 245 aaKnown RBP12.98□□□□□ -0.33
Col5a1-201ENSMUST00000028280 Scgb1b27Q91WB5 92 aa12.98□□□□□ -0.33
Col5a1-201ENSMUST00000028280 Rac1P63001 192 aa12.97□□□□□ -0.33
Col5a1-201ENSMUST00000028280 Hexim2Q3TVI4 313 aa12.97□□□□□ -0.33
Col5a1-201ENSMUST00000028280 Ms4a15Q3UPL6 245 aa12.97□□□□□ -0.33
Col5a1-201ENSMUST00000028280 Olfr429Q7TRW1 312 aa12.97□□□□□ -0.33
Col5a1-201ENSMUST00000028280 H2-M10.2Q85ZW9 329 aa12.97□□□□□ -0.33
Col5a1-201ENSMUST00000028280 Slc35c1Q8BLX4 363 aa12.97□□□□□ -0.33
Col5a1-201ENSMUST00000028280 Crb3Q8QZT4 113 aa12.97□□□□□ -0.33
Col5a1-201ENSMUST00000028280 Olfr1294Q8VGE5 312 aa12.97□□□□□ -0.33
Col5a1-201ENSMUST00000028280 Nhp2Q9CRB2 153 aaKnown RBP12.97□□□□□ -0.33
Col5a1-201ENSMUST00000028280 RtcAQ9D7H3 366 aa12.97□□□□□ -0.33
Col5a1-201ENSMUST00000028280 PolmQ9JIW4 496 aa12.97□□□□□ -0.33
Col5a1-201ENSMUST00000028280 Lpar2Q9JL06 348 aa12.97□□□□□ -0.33
Col5a1-201ENSMUST00000028280 Olfr173E9QAT7 321 aa12.97□□□□□ -0.33
Col5a1-201ENSMUST00000028280 Hoxa1P09022 331 aa12.97□□□□□ -0.33
Col5a1-201ENSMUST00000028280 Zfp663Q6NXM6 656 aa12.97□□□□□ -0.33
Col5a1-201ENSMUST00000028280 DraxinQ6PAL1 343 aa12.97□□□□□ -0.33
Col5a1-201ENSMUST00000028280 Ip6k1Q6PD10 433 aa12.97□□□□□ -0.33
Col5a1-201ENSMUST00000028280 Trmt12Q8BG71 446 aa12.97□□□□□ -0.33
Col5a1-201ENSMUST00000028280 Tmbim1Q8BJZ3 309 aa12.97□□□□□ -0.33
Col5a1-201ENSMUST00000028280 NraddQ8CJ26 228 aa12.97□□□□□ -0.33
Col5a1-201ENSMUST00000028280 Rbmxl1Q91VM5 388 aaKnown RBP12.97□□□□□ -0.33
Col5a1-201ENSMUST00000028280 Slc22a17Q9D9E0 401 aa12.97□□□□□ -0.33
Col5a1-201ENSMUST00000028280 PlgP20918 812 aa12.97□□□□□ -0.33
Col5a1-201ENSMUST00000028280 Ptx3P48759 381 aa12.97□□□□□ -0.33
Col5a1-201ENSMUST00000028280 Slc7a10P63115 530 aa12.97□□□□□ -0.33
Col5a1-201ENSMUST00000028280 March9Q3TZ87 348 aa12.97□□□□□ -0.33
Col5a1-201ENSMUST00000028280 Rnf149Q3U2C5 394 aa12.97□□□□□ -0.33
Col5a1-201ENSMUST00000028280 Olfr32Q7TQZ0 308 aa12.97□□□□□ -0.33
Col5a1-201ENSMUST00000028280 Lmo3Q8BZL8 145 aa12.97□□□□□ -0.33
Col5a1-201ENSMUST00000028280 Plpp7Q91WB2 271 aa12.97□□□□□ -0.33
Col5a1-201ENSMUST00000028280 Gm42791D3YYB5 209 aa12.97□□□□□ -0.33
Col5a1-201ENSMUST00000028280 Uba1yP31254 1058 aa12.97□□□□□ -0.33
Col5a1-201ENSMUST00000028280 Rab18P35293 206 aa12.97□□□□□ -0.33
Col5a1-201ENSMUST00000028280 Krba1Q6NXZ1 1043 aa12.97□□□□□ -0.33
Col5a1-201ENSMUST00000028280 Lrrtm1Q8K377 522 aa12.97□□□□□ -0.33
Col5a1-201ENSMUST00000028280 Fxyd4Q9D2W0 88 aa12.97□□□□□ -0.33
Col5a1-201ENSMUST00000028280 Lman2Q9DBH5 358 aaKnown RBP12.97□□□□□ -0.33
Col5a1-201ENSMUST00000028280 Mmp19Q9JHI0 527 aa12.97□□□□□ -0.33
Col5a1-201ENSMUST00000028280 Lcn11A2BHR2 178 aa12.97□□□□□ -0.33
Col5a1-201ENSMUST00000028280 Vmn1r16K7N775 303 aa12.97□□□□□ -0.33
Col5a1-201ENSMUST00000028280 Wsb1O54927 421 aa12.97□□□□□ -0.33
Col5a1-201ENSMUST00000028280 Cd160O88875 185 aa12.97□□□□□ -0.33
Col5a1-201ENSMUST00000028280 Nid1P10493 1245 aa12.97□□□□□ -0.33
Col5a1-201ENSMUST00000028280 GdnfP48540 211 aa12.97□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 35.9 ms