RNA–Protein interactions for RNA: ENST00000641009.1

LINC00339-211, long intergenic non-protein coding RNA 339, humanhuman

Gene LINC00339, Length 1,450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-211ENST00000641009 FHL1Q13642 323 aa11.88□□□□□ -0.51
LINC00339-211ENST00000641009 TAF11Q15544 211 aa11.88□□□□□ -0.51
LINC00339-211ENST00000641009 TMEM255AQ5JRV8 349 aa11.88□□□□□ -0.51
LINC00339-211ENST00000641009 SPATA46Q5T0L3 261 aa11.88□□□□□ -0.51
LINC00339-211ENST00000641009 ZNF101Q8IZC7 436 aa11.88□□□□□ -0.51
LINC00339-211ENST00000641009 LRRC75AQ8NAA5 344 aa11.88□□□□□ -0.51
LINC00339-211ENST00000641009 POM121L2Q96KW2 1035 aa11.88□□□□□ -0.51
LINC00339-211ENST00000641009 ALG12Q9BV10 488 aa11.88□□□□□ -0.51
LINC00339-211ENST00000641009 FNDC11Q9BVV2 318 aa11.88□□□□□ -0.51
LINC00339-211ENST00000641009 ZNF416Q9BWM5 594 aa11.88□□□□□ -0.51
LINC00339-211ENST00000641009 CCDC134Q9H6E4 229 aa11.88□□□□□ -0.51
LINC00339-211ENST00000641009 NBEAL1Q6ZS30 2694 aa11.87□□□□□ -0.51
LINC00339-211ENST00000641009 CXCR6O00574 342 aa11.87□□□□□ -0.51
LINC00339-211ENST00000641009 NME4O00746 187 aa11.87□□□□□ -0.51
LINC00339-211ENST00000641009 COX4I1P13073 169 aa11.87□□□□□ -0.51
LINC00339-211ENST00000641009 DRD4P21917 467 aa11.87□□□□□ -0.51
LINC00339-211ENST00000641009 LAP3P28838 519 aa11.87□□□□□ -0.51
LINC00339-211ENST00000641009 PRKCDQ05655 676 aa11.87□□□□□ -0.51
LINC00339-211ENST00000641009 TRAM2Q15035 370 aa11.87□□□□□ -0.51
LINC00339-211ENST00000641009 TSTQ16762 297 aaKnown RBP11.87□□□□□ -0.51
LINC00339-211ENST00000641009 PCGF3Q3KNV8 242 aa11.87□□□□□ -0.51
LINC00339-211ENST00000641009 THEM4Q5T1C6 240 aa11.87□□□□□ -0.51
LINC00339-211ENST00000641009 ARPINQ7Z6K5 226 aa11.87□□□□□ -0.51
LINC00339-211ENST00000641009 OAFQ86UD1 273 aa11.87□□□□□ -0.51
LINC00339-211ENST00000641009 GLCCI1Q86VQ1 547 aa11.87□□□□□ -0.51
LINC00339-211ENST00000641009 OR13C2Q8NGS9 318 aa11.87□□□□□ -0.51
LINC00339-211ENST00000641009 RP9Q8TA86 221 aaKnown RBP11.87□□□□□ -0.51
LINC00339-211ENST00000641009 RBP7Q96R05 134 aa11.87□□□□□ -0.51
LINC00339-211ENST00000641009 HIF1ANQ9NWT6 349 aa11.87□□□□□ -0.51
LINC00339-211ENST00000641009 A0A087WUU8 490 aa11.86□□□□□ -0.51
LINC00339-211ENST00000641009 A0A1W2PPL8 197 aa11.86□□□□□ -0.51
LINC00339-211ENST00000641009 HTR3EA5X5Y0 456 aa11.86□□□□□ -0.51
LINC00339-211ENST00000641009 GMNCA6NCL1 334 aa11.86□□□□□ -0.51
LINC00339-211ENST00000641009 EFCAB9A8MZ26 197 aa11.86□□□□□ -0.51
LINC00339-211ENST00000641009 H7C1C5 153 aa11.86□□□□□ -0.51
LINC00339-211ENST00000641009 GSTA4O15217 222 aa11.86□□□□□ -0.51
LINC00339-211ENST00000641009 TPD52L2O43399 206 aaKnown RBP11.86□□□□□ -0.51
LINC00339-211ENST00000641009 PRSS23O95084 383 aa11.86□□□□□ -0.51
LINC00339-211ENST00000641009 IGHV3-13P01766 116 aa11.86□□□□□ -0.51
LINC00339-211ENST00000641009 TFP02787 698 aa11.86□□□□□ -0.51
LINC00339-211ENST00000641009 MSMBP08118 114 aa11.86□□□□□ -0.51
LINC00339-211ENST00000641009 GAAP10253 952 aa11.86□□□□□ -0.51
LINC00339-211ENST00000641009 NR2C1P13056 603 aa11.86□□□□□ -0.51
LINC00339-211ENST00000641009 MPV17P39210 176 aa11.86□□□□□ -0.51
LINC00339-211ENST00000641009 GPR4P46093 362 aa11.86□□□□□ -0.51
LINC00339-211ENST00000641009 GDI2P50395 445 aaKnown RBP11.86□□□□□ -0.51
LINC00339-211ENST00000641009 SLC7A2P52569 658 aa11.86□□□□□ -0.51
LINC00339-211ENST00000641009 LMO4P61968 165 aa11.86□□□□□ -0.51
LINC00339-211ENST00000641009 LCN6P62502 163 aa11.86□□□□□ -0.51
LINC00339-211ENST00000641009 MVKQ03426 396 aa11.86□□□□□ -0.51
LINC00339-211ENST00000641009 IFI44LQ53G44 452 aa11.86□□□□□ -0.51
LINC00339-211ENST00000641009 AVPI1Q5T686 147 aa11.86□□□□□ -0.51
LINC00339-211ENST00000641009 FAM27BQ5VT28 67 aa11.86□□□□□ -0.51
LINC00339-211ENST00000641009 TBPL2Q6SJ96 375 aa11.86□□□□□ -0.51
LINC00339-211ENST00000641009 RFPL4BQ6ZWI9 263 aa11.86□□□□□ -0.51
LINC00339-211ENST00000641009 CBLL1Q75N03 491 aa11.86□□□□□ -0.51
LINC00339-211ENST00000641009 IPCEF1Q8WWN9 437 aaPredicted RBP11.86□□□□□ -0.51
LINC00339-211ENST00000641009 GEMIN6Q8WXD5 167 aaKnown RBP11.86□□□□□ -0.51
LINC00339-211ENST00000641009 TMEM186Q96B77 213 aa11.86□□□□□ -0.51
LINC00339-211ENST00000641009 OR2H1Q9GZK4 316 aa11.86□□□□□ -0.51
LINC00339-211ENST00000641009 WNT5BQ9H1J7 359 aa11.86□□□□□ -0.51
LINC00339-211ENST00000641009 NKIRAS2Q9NYR9 191 aa11.86□□□□□ -0.51
LINC00339-211ENST00000641009 AP3M1Q9Y2T2 418 aa11.86□□□□□ -0.51
LINC00339-211ENST00000641009 CACNG2Q9Y698 323 aa11.86□□□□□ -0.51
LINC00339-211ENST00000641009 IGHV1-69-2A0A0G2JMI3 117 aa11.85□□□□□ -0.51
LINC00339-211ENST00000641009 CDC42EP2O14613 210 aa11.85□□□□□ -0.51
LINC00339-211ENST00000641009 SERPINA1P01009 418 aa11.85□□□□□ -0.51
LINC00339-211ENST00000641009 CST2P09228 141 aa11.85□□□□□ -0.51
LINC00339-211ENST00000641009 CRYBB2P43320 205 aa11.85□□□□□ -0.51
LINC00339-211ENST00000641009 GSK3BP49841 420 aa11.85□□□□□ -0.51
LINC00339-211ENST00000641009 ZNF81P51508 661 aa11.85□□□□□ -0.51
LINC00339-211ENST00000641009 ZNF718Q3SXZ3 478 aa11.85□□□□□ -0.51
LINC00339-211ENST00000641009 FAM205BPQ63HN1 556 aa11.85□□□□□ -0.51
LINC00339-211ENST00000641009 ZNF774Q6NX45 483 aa11.85□□□□□ -0.51
LINC00339-211ENST00000641009 C8orf82Q6P1X6 216 aaPredicted RBP11.85□□□□□ -0.51
LINC00339-211ENST00000641009 ZNF730Q6ZMV8 503 aa11.85□□□□□ -0.51
LINC00339-211ENST00000641009 FOXL2NBQ6ZUU3 175 aa11.85□□□□□ -0.51
LINC00339-211ENST00000641009 USP51Q70EK9 711 aa11.85□□□□□ -0.51
LINC00339-211ENST00000641009 FKBP9P1Q75LS8 142 aa11.85□□□□□ -0.51
LINC00339-211ENST00000641009 TREML1Q86YW5 311 aa11.85□□□□□ -0.51
LINC00339-211ENST00000641009 RFLNBQ8N5W9 214 aa11.85□□□□□ -0.51
LINC00339-211ENST00000641009 SLC25A40Q8TBP6 338 aa11.85□□□□□ -0.51
LINC00339-211ENST00000641009 FNDC8Q8TC99 324 aa11.85□□□□□ -0.51
LINC00339-211ENST00000641009 ACOT11Q8WXI4 607 aaPredicted RBP11.85□□□□□ -0.51
LINC00339-211ENST00000641009 MARS2Q96GW9 593 aaKnown RBP11.85□□□□□ -0.51
LINC00339-211ENST00000641009 HSH2DQ96JZ2 352 aa11.85□□□□□ -0.51
LINC00339-211ENST00000641009 LRRC37BQ96QE4 947 aa11.85□□□□□ -0.51
LINC00339-211ENST00000641009 OR2J1Q9GZK6 312 aa11.85□□□□□ -0.51
LINC00339-211ENST00000641009 SAP30LQ9HAJ7 183 aa11.85□□□□□ -0.51
LINC00339-211ENST00000641009 DECR2Q9NUI1 292 aa11.85□□□□□ -0.51
LINC00339-211ENST00000641009 EIF3KQ9UBQ5 218 aaKnown RBP11.85□□□□□ -0.51
LINC00339-211ENST00000641009 ADAM18Q9Y3Q7 739 aa11.85□□□□□ -0.51
LINC00339-211ENST00000641009 A6NIZ1 184 aa11.84□□□□□ -0.51
LINC00339-211ENST00000641009 SPRY3O43610 288 aa11.84□□□□□ -0.51
LINC00339-211ENST00000641009 TCF21O43680 179 aa11.84□□□□□ -0.51
LINC00339-211ENST00000641009 IGHV1-46P01743 117 aa11.84□□□□□ -0.51
LINC00339-211ENST00000641009 MT-ND5P03915 603 aa11.84□□□□□ -0.51
LINC00339-211ENST00000641009 SCG5P05408 212 aa11.84□□□□□ -0.51
LINC00339-211ENST00000641009 NCK1P16333 377 aa11.84□□□□□ -0.51
LINC00339-211ENST00000641009 ZNF26P17031 533 aaPredicted RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms