RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 PCGF3Q3KNV8 242 aa16.26■□□□□ 0.19
CLN6-221ENST00000637494 ALKBH6Q3KRA9 238 aa16.26■□□□□ 0.19
CLN6-221ENST00000637494 ZBED5Q49AG3 693 aa16.26■□□□□ 0.19
CLN6-221ENST00000637494 ARL9Q6T311 187 aa16.26■□□□□ 0.19
CLN6-221ENST00000637494 TMPRSS11FQ6ZWK6 438 aa16.26■□□□□ 0.19
CLN6-221ENST00000637494 MEX3DQ86XN8 651 aaKnown RBP16.26■□□□□ 0.19
CLN6-221ENST00000637494 C1orf174Q8IYL3 243 aa16.26■□□□□ 0.19
CLN6-221ENST00000637494 PAQR4Q8N4S7 273 aaPredicted RBP16.26■□□□□ 0.19
CLN6-221ENST00000637494 ARIH2OSQ8N7S6 290 aa16.26■□□□□ 0.19
CLN6-221ENST00000637494 OR1J1Q8NGS3 322 aa16.26■□□□□ 0.19
CLN6-221ENST00000637494 OR13C2Q8NGS9 318 aa16.26■□□□□ 0.19
CLN6-221ENST00000637494 NABP1Q96AH0 204 aa16.26■□□□□ 0.19
CLN6-221ENST00000637494 NMD3Q96D46 503 aaKnown RBP16.26■□□□□ 0.19
CLN6-221ENST00000637494 TSPAN32Q96QS1 320 aa16.26■□□□□ 0.19
CLN6-221ENST00000637494 SNX18Q96RF0 628 aa16.26■□□□□ 0.19
CLN6-221ENST00000637494 ZNF416Q9BWM5 594 aa16.26■□□□□ 0.19
CLN6-221ENST00000637494 MYLK2Q9H1R3 596 aa16.26■□□□□ 0.19
CLN6-221ENST00000637494 HINT3Q9NQE9 182 aaKnown RBP16.26■□□□□ 0.19
CLN6-221ENST00000637494 EGFL7Q9UHF1 273 aa16.26■□□□□ 0.19
CLN6-221ENST00000637494 TIMM10BQ9Y5J6 103 aa16.26■□□□□ 0.19
CLN6-221ENST00000637494 JMJD1CQ15652 2540 aa16.25■□□□□ 0.19
CLN6-221ENST00000637494 C5orf49A4QMS7 147 aa16.25■□□□□ 0.19
CLN6-221ENST00000637494 RNF212BA8MTL3 300 aa16.25■□□□□ 0.19
CLN6-221ENST00000637494 C12orf71A8MTZ7 269 aa16.25■□□□□ 0.19
CLN6-221ENST00000637494 TPD52L2O43399 206 aaKnown RBP16.25■□□□□ 0.19
CLN6-221ENST00000637494 H1F0P07305 194 aaKnown RBP16.25■□□□□ 0.19
CLN6-221ENST00000637494 ITGA2P17301 1181 aa16.25■□□□□ 0.19
CLN6-221ENST00000637494 MSR1P21757 451 aa16.25■□□□□ 0.19
CLN6-221ENST00000637494 IGFBP5P24593 272 aa16.25■□□□□ 0.19
CLN6-221ENST00000637494 ERVK-25P63136 954 aa16.25■□□□□ 0.19
CLN6-221ENST00000637494 MRPS11P82912 194 aaKnown RBP16.25■□□□□ 0.19
CLN6-221ENST00000637494 TEKQ02763 1124 aa16.25■□□□□ 0.19
CLN6-221ENST00000637494 ZNF718Q3SXZ3 478 aa16.25■□□□□ 0.19
CLN6-221ENST00000637494 FGD3Q5JSP0 725 aa16.25■□□□□ 0.19
CLN6-221ENST00000637494 TBPL2Q6SJ96 375 aa16.25■□□□□ 0.19
CLN6-221ENST00000637494 LINC01356Q8N9X3 169 aa16.25■□□□□ 0.19
CLN6-221ENST00000637494 LRRC75AQ8NAA5 344 aa16.25■□□□□ 0.19
CLN6-221ENST00000637494 CPEB3Q8NE35 698 aaKnown RBP16.25■□□□□ 0.19
CLN6-221ENST00000637494 ZNF570Q96NI8 536 aa16.25■□□□□ 0.19
CLN6-221ENST00000637494 WACQ9BTA9 647 aa16.25■□□□□ 0.19
CLN6-221ENST00000637494 AURKCQ9UQB9 309 aa16.25■□□□□ 0.19
CLN6-221ENST00000637494 YLPM1P49750 1951 aaKnown RBP16.24■□□□□ 0.19
CLN6-221ENST00000637494 IGLV3-9A0A075B6K5 115 aa16.24■□□□□ 0.19
CLN6-221ENST00000637494 IGKV1D-43A0A0B4J1Z2 117 aa16.24■□□□□ 0.19
CLN6-221ENST00000637494 C17orf100A8MU93 164 aa16.24■□□□□ 0.19
CLN6-221ENST00000637494 AHCYL1O43865 530 aa16.24■□□□□ 0.19
CLN6-221ENST00000637494 LILRA1O75019 489 aa16.24■□□□□ 0.19
CLN6-221ENST00000637494 PRSS23O95084 383 aa16.24■□□□□ 0.19
CLN6-221ENST00000637494 CLPTM1O96005 669 aa16.24■□□□□ 0.19
CLN6-221ENST00000637494 HPXP02790 462 aa16.24■□□□□ 0.19
CLN6-221ENST00000637494 CD14P08571 375 aa16.24■□□□□ 0.19
CLN6-221ENST00000637494 RHCEP18577 417 aa16.24■□□□□ 0.19
CLN6-221ENST00000637494 PCMT1P22061 227 aa16.24■□□□□ 0.19
CLN6-221ENST00000637494 LAP3P28838 519 aa16.24■□□□□ 0.19
CLN6-221ENST00000637494 TMEM33P57088 247 aa16.24■□□□□ 0.19
CLN6-221ENST00000637494 PSG4Q00888 419 aa16.24■□□□□ 0.19
CLN6-221ENST00000637494 ELFN2Q5R3F8 820 aa16.24■□□□□ 0.19
CLN6-221ENST00000637494 FAM120AOSQ5T036 256 aa16.24■□□□□ 0.19
CLN6-221ENST00000637494 FAM156AQ8NDB6 213 aa16.24■□□□□ 0.19
CLN6-221ENST00000637494 AKR7LQ8NHP1 331 aa16.24■□□□□ 0.19
CLN6-221ENST00000637494 SPATA3Q8NHX4 192 aa16.24■□□□□ 0.19
CLN6-221ENST00000637494 TMEM158Q8WZ71 300 aa16.24■□□□□ 0.19
CLN6-221ENST00000637494 ELOVL3Q9HB03 270 aa16.24■□□□□ 0.19
CLN6-221ENST00000637494 DECR2Q9NUI1 292 aa16.24■□□□□ 0.19
CLN6-221ENST00000637494 A0A1W2PRQ8 180 aa16.23■□□□□ 0.19
CLN6-221ENST00000637494 PLSCR5A0PG75 271 aa16.23■□□□□ 0.19
CLN6-221ENST00000637494 SNX3O60493 162 aa16.23■□□□□ 0.19
CLN6-221ENST00000637494 NDUFB2O95178 105 aa16.23■□□□□ 0.19
CLN6-221ENST00000637494 COL8A2P25067 703 aa16.23■□□□□ 0.19
CLN6-221ENST00000637494 ARHGDIAP52565 204 aa16.23■□□□□ 0.19
CLN6-221ENST00000637494 SMIM11AP58511 58 aa16.23■□□□□ 0.19
CLN6-221ENST00000637494 ERVS71-1P61550 626 aa16.23■□□□□ 0.19
CLN6-221ENST00000637494 DGCR6Q14129 220 aa16.23■□□□□ 0.19
CLN6-221ENST00000637494 SYT9Q86SS6 491 aa16.23■□□□□ 0.19
CLN6-221ENST00000637494 CLDN22Q8N7P3 220 aa16.23■□□□□ 0.19
CLN6-221ENST00000637494 SLC7A13Q8TCU3 470 aa16.23■□□□□ 0.19
CLN6-221ENST00000637494 FAM46AQ96IP4 442 aaKnown RBP16.23■□□□□ 0.19
CLN6-221ENST00000637494 POM121L2Q96KW2 1035 aa16.23■□□□□ 0.19
CLN6-221ENST00000637494 OR2H1Q9GZK4 316 aa16.23■□□□□ 0.19
CLN6-221ENST00000637494 DCAF13Q9NV06 445 aaKnown RBP16.23■□□□□ 0.19
CLN6-221ENST00000637494 MAGEL2Q9UJ55 1249 aa16.23■□□□□ 0.19
CLN6-221ENST00000637494 SONP18583 2426 aaKnown RBP16.22■□□□□ 0.19
CLN6-221ENST00000637494 CDC42EP2O14613 210 aa16.22■□□□□ 0.19
CLN6-221ENST00000637494 PPIHO43447 177 aaKnown RBP16.22■□□□□ 0.19
CLN6-221ENST00000637494 FUT4P22083 530 aa16.22■□□□□ 0.19
CLN6-221ENST00000637494 CCL8P80075 99 aa16.22■□□□□ 0.19
CLN6-221ENST00000637494 CCNIQ14094 377 aa16.22■□□□□ 0.19
CLN6-221ENST00000637494 TRIP10Q15642 601 aa16.22■□□□□ 0.19
CLN6-221ENST00000637494 GPR139Q6DWJ6 353 aa16.22■□□□□ 0.19
CLN6-221ENST00000637494 FOXL2NBQ6ZUU3 175 aa16.22■□□□□ 0.19
CLN6-221ENST00000637494 MCUR1Q96AQ8 359 aa16.22■□□□□ 0.19
CLN6-221ENST00000637494 POLE4Q9NR33 117 aa16.22■□□□□ 0.19
CLN6-221ENST00000637494 ZNF275Q9NSD4 429 aaPredicted RBP16.22■□□□□ 0.19
CLN6-221ENST00000637494 NKIRAS2Q9NYR9 191 aa16.22■□□□□ 0.19
CLN6-221ENST00000637494 NDUFAF4Q9P032 175 aa16.22■□□□□ 0.19
CLN6-221ENST00000637494 NDRG4Q9ULP0 352 aaKnown RBP16.22■□□□□ 0.19
CLN6-221ENST00000637494 ADAM18Q9Y3Q7 739 aa16.22■□□□□ 0.19
CLN6-221ENST00000637494 PRSS37A4D1T9 235 aa16.21■□□□□ 0.19
CLN6-221ENST00000637494 H7C1C5 153 aa16.21■□□□□ 0.19
CLN6-221ENST00000637494 IGHV3-13P01766 116 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms