RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 C17orf100A8MU93 164 aa15.35■□□□□ 0.05
PNKP-225ENST00000636214 B4DSR2 109 aa15.35■□□□□ 0.05
PNKP-225ENST00000636214 XKRYO14609 159 aa15.35■□□□□ 0.05
PNKP-225ENST00000636214 GMNNO75496 209 aa15.35■□□□□ 0.05
PNKP-225ENST00000636214 CLPTM1O96005 669 aa15.35■□□□□ 0.05
PNKP-225ENST00000636214 TFP02787 698 aa15.35■□□□□ 0.05
PNKP-225ENST00000636214 MMP7P09237 267 aaPredicted RBP15.35■□□□□ 0.05
PNKP-225ENST00000636214 ZNF250P15622 560 aa15.35■□□□□ 0.05
PNKP-225ENST00000636214 ZNF32P17041 273 aa15.35■□□□□ 0.05
PNKP-225ENST00000636214 COL8A2P25067 703 aa15.35■□□□□ 0.05
PNKP-225ENST00000636214 NUDT2P50583 147 aa15.35■□□□□ 0.05
PNKP-225ENST00000636214 ERVS71-1P61550 626 aa15.35■□□□□ 0.05
PNKP-225ENST00000636214 ERVK-25P63136 954 aa15.35■□□□□ 0.05
PNKP-225ENST00000636214 ZNF718Q3SXZ3 478 aa15.35■□□□□ 0.05
PNKP-225ENST00000636214 CBLL1Q75N03 491 aa15.35■□□□□ 0.05
PNKP-225ENST00000636214 IGFN1Q86VF2 1251 aa15.35■□□□□ 0.05
PNKP-225ENST00000636214 ACOT11Q8WXI4 607 aaPredicted RBP15.35■□□□□ 0.05
PNKP-225ENST00000636214 ZNF446Q9NWS9 450 aa15.35■□□□□ 0.05
PNKP-225ENST00000636214 FAM32AQ9Y421 112 aaKnown RBP15.35■□□□□ 0.05
PNKP-225ENST00000636214 CUBNO60494 3623 aa15.34■□□□□ 0.05
PNKP-225ENST00000636214 IGLV3-9A0A075B6K5 115 aa15.34■□□□□ 0.05
PNKP-225ENST00000636214 PLSCR5A0PG75 271 aa15.34■□□□□ 0.05
PNKP-225ENST00000636214 J3KTA2 159 aa15.34■□□□□ 0.05
PNKP-225ENST00000636214 NCR1O76036 304 aa15.34■□□□□ 0.05
PNKP-225ENST00000636214 SERPINA1P01009 418 aa15.34■□□□□ 0.05
PNKP-225ENST00000636214 IGHMP01871 453 aa15.34■□□□□ 0.05
PNKP-225ENST00000636214 MAKP20794 623 aa15.34■□□□□ 0.05
PNKP-225ENST00000636214 MDH1P40925 334 aaKnown RBP15.34■□□□□ 0.05
PNKP-225ENST00000636214 CCL8P80075 99 aa15.34■□□□□ 0.05
PNKP-225ENST00000636214 GLO1Q04760 184 aa15.34■□□□□ 0.05
PNKP-225ENST00000636214 PRKCDQ05655 676 aa15.34■□□□□ 0.05
PNKP-225ENST00000636214 LIPNQ5VXI9 398 aa15.34■□□□□ 0.05
PNKP-225ENST00000636214 SLC25A47Q6Q0C1 308 aa15.34■□□□□ 0.05
PNKP-225ENST00000636214 ARL9Q6T311 187 aa15.34■□□□□ 0.05
PNKP-225ENST00000636214 C1orf174Q8IYL3 243 aa15.34■□□□□ 0.05
PNKP-225ENST00000636214 AKR7LQ8NHP1 331 aa15.34■□□□□ 0.05
PNKP-225ENST00000636214 CMTM5Q96DZ9 223 aa15.34■□□□□ 0.05
PNKP-225ENST00000636214 GRHPRQ9UBQ7 328 aa15.34■□□□□ 0.05
PNKP-225ENST00000636214 RPS6KA6Q9UK32 745 aa15.34■□□□□ 0.05
PNKP-225ENST00000636214 TMEM5Q9Y2B1 443 aa15.34■□□□□ 0.05
PNKP-225ENST00000636214 IGKV1D-43A0A0B4J1Z2 117 aa15.33■□□□□ 0.04
PNKP-225ENST00000636214 CST2P09228 141 aa15.33■□□□□ 0.04
PNKP-225ENST00000636214 MSR1P21757 451 aa15.33■□□□□ 0.04
PNKP-225ENST00000636214 MAGEB1P43366 347 aa15.33■□□□□ 0.04
PNKP-225ENST00000636214 GSK3BP49841 420 aa15.33■□□□□ 0.04
PNKP-225ENST00000636214 ARHGDIAP52565 204 aa15.33■□□□□ 0.04
PNKP-225ENST00000636214 DVL1P1P54792 670 aaPredicted RBP15.33■□□□□ 0.04
PNKP-225ENST00000636214 FAM27BQ5VT28 67 aa15.33■□□□□ 0.04
PNKP-225ENST00000636214 HACD2Q6Y1H2 254 aa15.33■□□□□ 0.04
PNKP-225ENST00000636214 RINLQ6ZS11 566 aa15.33■□□□□ 0.04
PNKP-225ENST00000636214 MBOAT2Q6ZWT7 520 aa15.33■□□□□ 0.04
PNKP-225ENST00000636214 CPEB3Q8NE35 698 aaKnown RBP15.33■□□□□ 0.04
PNKP-225ENST00000636214 OR13C2Q8NGS9 318 aa15.33■□□□□ 0.04
PNKP-225ENST00000636214 CLDND2Q8NHS1 167 aa15.33■□□□□ 0.04
PNKP-225ENST00000636214 NABP1Q96AH0 204 aa15.33■□□□□ 0.04
PNKP-225ENST00000636214 TSPAN32Q96QS1 320 aa15.33■□□□□ 0.04
PNKP-225ENST00000636214 SAP30LQ9HAJ7 183 aa15.33■□□□□ 0.04
PNKP-225ENST00000636214 ELOVL3Q9HB03 270 aa15.33■□□□□ 0.04
PNKP-225ENST00000636214 KRCC1Q9NPI7 259 aaPredicted RBP15.33■□□□□ 0.04
PNKP-225ENST00000636214 GRIP1Q9Y3R0 1128 aa15.33■□□□□ 0.04
PNKP-225ENST00000636214 UGT2A1Q9Y4X1 527 aa15.33■□□□□ 0.04
PNKP-225ENST00000636214 TIMM10BQ9Y5J6 103 aa15.33■□□□□ 0.04
PNKP-225ENST00000636214 SNX13Q9Y5W8 968 aa15.33■□□□□ 0.04
PNKP-225ENST00000636214 C12orf71A8MTZ7 269 aa15.32■□□□□ 0.04
PNKP-225ENST00000636214 NME4O00746 187 aa15.32■□□□□ 0.04
PNKP-225ENST00000636214 CDC14BO60729 498 aa15.32■□□□□ 0.04
PNKP-225ENST00000636214 LAP3P28838 519 aa15.32■□□□□ 0.04
PNKP-225ENST00000636214 GPR4P46093 362 aa15.32■□□□□ 0.04
PNKP-225ENST00000636214 ZNF81P51508 661 aa15.32■□□□□ 0.04
PNKP-225ENST00000636214 PSG4Q00888 419 aa15.32■□□□□ 0.04
PNKP-225ENST00000636214 SPATA46Q5T0L3 261 aa15.32■□□□□ 0.04
PNKP-225ENST00000636214 SHQ1Q6PI26 577 aaKnown RBP15.32■□□□□ 0.04
PNKP-225ENST00000636214 MEX3DQ86XN8 651 aaKnown RBP15.32■□□□□ 0.04
PNKP-225ENST00000636214 ABHD4Q8TB40 342 aa15.32■□□□□ 0.04
PNKP-225ENST00000636214 YIPF5Q969M3 257 aa15.32■□□□□ 0.04
PNKP-225ENST00000636214 NMD3Q96D46 503 aaKnown RBP15.32■□□□□ 0.04
PNKP-225ENST00000636214 TIMD4Q96H15 378 aa15.32■□□□□ 0.04
PNKP-225ENST00000636214 POM121L2Q96KW2 1035 aa15.32■□□□□ 0.04
PNKP-225ENST00000636214 OR2H1Q9GZK4 316 aa15.32■□□□□ 0.04
PNKP-225ENST00000636214 ANKRD19PQ9H560 264 aa15.32■□□□□ 0.04
PNKP-225ENST00000636214 MAN2C1Q9NTJ4 1040 aa15.32■□□□□ 0.04
PNKP-225ENST00000636214 NKIRAS2Q9NYR9 191 aa15.32■□□□□ 0.04
PNKP-225ENST00000636214 GMPR2Q9P2T1 348 aaKnown RBP15.32■□□□□ 0.04
PNKP-225ENST00000636214 NDRG4Q9ULP0 352 aaKnown RBP15.32■□□□□ 0.04
PNKP-225ENST00000636214 WNK2Q9Y3S1 2297 aa15.31■□□□□ 0.04
PNKP-225ENST00000636214 IGHV1-69-2A0A0G2JMI3 117 aa15.31■□□□□ 0.04
PNKP-225ENST00000636214 IGHV3-13P01766 116 aa15.31■□□□□ 0.04
PNKP-225ENST00000636214 SCGB2A2Q13296 93 aa15.31■□□□□ 0.04
PNKP-225ENST00000636214 HFEQ30201 348 aa15.31■□□□□ 0.04
PNKP-225ENST00000636214 ZBED5Q49AG3 693 aa15.31■□□□□ 0.04
PNKP-225ENST00000636214 ZMAT1Q5H9K5 638 aa15.31■□□□□ 0.04
PNKP-225ENST00000636214 FGD3Q5JSP0 725 aa15.31■□□□□ 0.04
PNKP-225ENST00000636214 CLDN22Q8N7P3 220 aa15.31■□□□□ 0.04
PNKP-225ENST00000636214 OR51F2Q8NH61 342 aa15.31■□□□□ 0.04
PNKP-225ENST00000636214 ELMOD3Q96FG2 381 aa15.31■□□□□ 0.04
PNKP-225ENST00000636214 ZNF570Q96NI8 536 aa15.31■□□□□ 0.04
PNKP-225ENST00000636214 NSRP1Q9H0G5 558 aaKnown RBP15.31■□□□□ 0.04
PNKP-225ENST00000636214 LPAR2Q9HBW0 351 aa15.31■□□□□ 0.04
PNKP-225ENST00000636214 CYSLTR2Q9NS75 346 aa15.31■□□□□ 0.04
PNKP-225ENST00000636214 TREM2Q9NZC2 230 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms