RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 GP6Q9HCN6 339 aa6.69□□□□□ -1.34
PTP4A1-206ENST00000627002 PARPBPQ9NWS1 579 aa6.69□□□□□ -1.34
PTP4A1-206ENST00000627002 MRPL22Q9NWU5 206 aaKnown RBP6.69□□□□□ -1.34
PTP4A1-206ENST00000627002 SPRR3Q9UBC9 169 aa6.69□□□□□ -1.34
PTP4A1-206ENST00000627002 FOXD3Q9UJU5 478 aaPredicted RBP6.69□□□□□ -1.34
PTP4A1-206ENST00000627002 GNG8Q9UK08 70 aa6.69□□□□□ -1.34
PTP4A1-206ENST00000627002 CAMK2AQ9UQM7 478 aa6.69□□□□□ -1.34
PTP4A1-206ENST00000627002 B3GNT3Q9Y2A9 372 aa6.69□□□□□ -1.34
PTP4A1-206ENST00000627002 PKD1L2Q7Z442 2459 aa6.69□□□□□ -1.34
PTP4A1-206ENST00000627002 IGKV1D-43A0A0B4J1Z2 117 aa6.68□□□□□ -1.34
PTP4A1-206ENST00000627002 LOC100506127A0A0U1RQW1 187 aa6.68□□□□□ -1.34
PTP4A1-206ENST00000627002 PNMA8CA0A1B0GUJ8 204 aa6.68□□□□□ -1.34
PTP4A1-206ENST00000627002 TRDV1A0A1B0GX56 115 aa6.68□□□□□ -1.34
PTP4A1-206ENST00000627002 OR14I1A6ND48 311 aa6.68□□□□□ -1.34
PTP4A1-206ENST00000627002 OGG1O15527 345 aa6.68□□□□□ -1.34
PTP4A1-206ENST00000627002 DHHO43323 396 aa6.68□□□□□ -1.34
PTP4A1-206ENST00000627002 PLPP2O43688 288 aa6.68□□□□□ -1.34
PTP4A1-206ENST00000627002 ZNF254O75437 659 aa6.68□□□□□ -1.34
PTP4A1-206ENST00000627002 GPANK1O95872 356 aa6.68□□□□□ -1.34
PTP4A1-206ENST00000627002 LALBAP00709 142 aa6.68□□□□□ -1.34
PTP4A1-206ENST00000627002 SERPINA3P01011 423 aa6.68□□□□□ -1.34
PTP4A1-206ENST00000627002 HLA-DPB1P04440 258 aa6.68□□□□□ -1.34
PTP4A1-206ENST00000627002 NR4A1P22736 598 aa6.68□□□□□ -1.34
PTP4A1-206ENST00000627002 EDNRAP25101 427 aa6.68□□□□□ -1.34
PTP4A1-206ENST00000627002 CRYBB2P43320 205 aa6.68□□□□□ -1.34
PTP4A1-206ENST00000627002 SELENOPP49908 381 aa6.68□□□□□ -1.34
PTP4A1-206ENST00000627002 VBP1P61758 197 aa6.68□□□□□ -1.34
PTP4A1-206ENST00000627002 NCS1P62166 190 aa6.68□□□□□ -1.34
PTP4A1-206ENST00000627002 LSM3P62310 102 aaKnown RBP6.68□□□□□ -1.34
PTP4A1-206ENST00000627002 LSM6P62312 80 aaKnown RBP6.68□□□□□ -1.34
PTP4A1-206ENST00000627002 RPS25P62851 125 aaKnown RBP6.68□□□□□ -1.34
PTP4A1-206ENST00000627002 ROM1Q03395 351 aa6.68□□□□□ -1.34
PTP4A1-206ENST00000627002 AQP6Q13520 282 aa6.68□□□□□ -1.34
PTP4A1-206ENST00000627002 EIF2B1Q14232 305 aaKnown RBP6.68□□□□□ -1.34
PTP4A1-206ENST00000627002 SPCS2Q15005 226 aa6.68□□□□□ -1.34
PTP4A1-206ENST00000627002 SF3B4Q15427 424 aaKnown RBP eCLIP6.68□□□□□ -1.34
PTP4A1-206ENST00000627002 STK11Q15831 433 aa6.68□□□□□ -1.34
PTP4A1-206ENST00000627002 RIPPLY2Q5TAB7 128 aa6.68□□□□□ -1.34
PTP4A1-206ENST00000627002 ZNF544Q6NX49 715 aa6.68□□□□□ -1.34
PTP4A1-206ENST00000627002 LRFN4Q6PJG9 635 aa6.68□□□□□ -1.34
PTP4A1-206ENST00000627002 CD200R1LQ6Q8B3 271 aa6.68□□□□□ -1.34
PTP4A1-206ENST00000627002 DEGS2Q6QHC5 323 aa6.68□□□□□ -1.34
PTP4A1-206ENST00000627002 FOXL2NBQ6ZUU3 175 aa6.68□□□□□ -1.34
PTP4A1-206ENST00000627002 SIAH3Q8IW03 269 aa6.68□□□□□ -1.34
PTP4A1-206ENST00000627002 ZNF679Q8IYX0 411 aa6.68□□□□□ -1.34
PTP4A1-206ENST00000627002 GPR137CQ8N3F9 429 aa6.68□□□□□ -1.34
PTP4A1-206ENST00000627002 RFLNBQ8N5W9 214 aa6.68□□□□□ -1.34
PTP4A1-206ENST00000627002 RBMXL3Q8N7X1 1067 aaKnown RBP6.68□□□□□ -1.34
PTP4A1-206ENST00000627002 YIPF7Q8N8F6 280 aa6.68□□□□□ -1.34
PTP4A1-206ENST00000627002 OR2AJ1Q8NGZ0 328 aa6.68□□□□□ -1.34
PTP4A1-206ENST00000627002 OR52N5Q8NH56 324 aa6.68□□□□□ -1.34
PTP4A1-206ENST00000627002 FNDC9Q8TBE3 224 aa6.68□□□□□ -1.34
PTP4A1-206ENST00000627002 ABHD3Q8WU67 409 aa6.68□□□□□ -1.34
PTP4A1-206ENST00000627002 C11orf40Q8WZ69 217 aa6.68□□□□□ -1.34
PTP4A1-206ENST00000627002 RPL3LQ92901 407 aaKnown RBP6.68□□□□□ -1.34
PTP4A1-206ENST00000627002 ABHD17AQ96GS6 310 aa6.68□□□□□ -1.34
PTP4A1-206ENST00000627002 FOXN4Q96NZ1 517 aa6.68□□□□□ -1.34
PTP4A1-206ENST00000627002 CHCHD6Q9BRQ6 235 aa6.68□□□□□ -1.34
PTP4A1-206ENST00000627002 DCUN1D5Q9BTE7 237 aa6.68□□□□□ -1.34
PTP4A1-206ENST00000627002 REPIN1Q9BWE0 567 aaKnown RBP6.68□□□□□ -1.34
PTP4A1-206ENST00000627002 MROQ9BYG7 248 aa6.68□□□□□ -1.34
PTP4A1-206ENST00000627002 LINC00470Q9BZP3 86 aa6.68□□□□□ -1.34
PTP4A1-206ENST00000627002 SEC61A2Q9H9S3 476 aa6.68□□□□□ -1.34
PTP4A1-206ENST00000627002 SIAEQ9HAT2 523 aa6.68□□□□□ -1.34
PTP4A1-206ENST00000627002 BCO1Q9HAY6 547 aa6.68□□□□□ -1.34
PTP4A1-206ENST00000627002 EXOSC4Q9NPD3 245 aaKnown RBP6.68□□□□□ -1.34
PTP4A1-206ENST00000627002 GLRX2Q9NS18 164 aa6.68□□□□□ -1.34
PTP4A1-206ENST00000627002 IKZF2Q9UKS7 526 aa6.68□□□□□ -1.34
PTP4A1-206ENST00000627002 GSTK1Q9Y2Q3 226 aa6.68□□□□□ -1.34
PTP4A1-206ENST00000627002 POLR1DQ9Y2S0 133 aa6.68□□□□□ -1.34
PTP4A1-206ENST00000627002 KLHDC2Q9Y2U9 406 aa6.68□□□□□ -1.34
PTP4A1-206ENST00000627002 RAXQ9Y2V3 346 aa6.68□□□□□ -1.34
PTP4A1-206ENST00000627002 NOSIPQ9Y314 301 aaKnown RBP6.68□□□□□ -1.34
PTP4A1-206ENST00000627002 SF3B6Q9Y3B4 125 aaKnown RBP6.68□□□□□ -1.34
PTP4A1-206ENST00000627002 FASNP49327 2511 aaKnown RBP6.67□□□□□ -1.34
PTP4A1-206ENST00000627002 ASPMQ8IZT6 3477 aa6.67□□□□□ -1.34
PTP4A1-206ENST00000627002 A0A087WV48 116 aa6.67□□□□□ -1.34
PTP4A1-206ENST00000627002 A0A1W2PPW3 197 aa6.67□□□□□ -1.34
PTP4A1-206ENST00000627002 SLC22A20A6NK97 555 aa6.67□□□□□ -1.34
PTP4A1-206ENST00000627002 E9PI62 339 aa6.67□□□□□ -1.34
PTP4A1-206ENST00000627002 GPRIN2O60269 458 aa6.67□□□□□ -1.34
PTP4A1-206ENST00000627002 MRPL33O75394 65 aaKnown RBP6.67□□□□□ -1.34
PTP4A1-206ENST00000627002 GPX5O75715 221 aa6.67□□□□□ -1.34
PTP4A1-206ENST00000627002 RGS9O75916 674 aaPredicted RBP6.67□□□□□ -1.34
PTP4A1-206ENST00000627002 KRT33AO76009 404 aa6.67□□□□□ -1.34
PTP4A1-206ENST00000627002 MPZL1O95297 269 aa6.67□□□□□ -1.34
PTP4A1-206ENST00000627002 ABHD16AO95870 558 aa6.67□□□□□ -1.34
PTP4A1-206ENST00000627002 PDGFAP04085 211 aa6.67□□□□□ -1.34
PTP4A1-206ENST00000627002 YES1P07947 543 aa6.67□□□□□ -1.34
PTP4A1-206ENST00000627002 OR8G3PP0DMU2 310 aa6.67□□□□□ -1.34
PTP4A1-206ENST00000627002 NPR2P20594 1047 aa6.67□□□□□ -1.34
PTP4A1-206ENST00000627002 MSR1P21757 451 aa6.67□□□□□ -1.34
PTP4A1-206ENST00000627002 PCSK6P29122 969 aa6.67□□□□□ -1.34
PTP4A1-206ENST00000627002 FGF9P31371 208 aaPredicted RBP6.67□□□□□ -1.34
PTP4A1-206ENST00000627002 SERPINB10P48595 397 aa6.67□□□□□ -1.34
PTP4A1-206ENST00000627002 RIDAP52758 137 aaKnown RBP6.67□□□□□ -1.34
PTP4A1-206ENST00000627002 MRPS34P82930 218 aaKnown RBP6.67□□□□□ -1.34
PTP4A1-206ENST00000627002 CDK5R1Q15078 307 aa6.67□□□□□ -1.34
PTP4A1-206ENST00000627002 C3AR1Q16581 482 aa6.67□□□□□ -1.34
PTP4A1-206ENST00000627002 MEP1BQ16820 701 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms