RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 OVOL3O00110 214 aa12.15□□□□□ -0.46
SNRPA1-216ENST00000626000 SLC16A7O60669 478 aa12.15□□□□□ -0.46
SNRPA1-216ENST00000626000 GASTP01350 101 aa12.15□□□□□ -0.46
SNRPA1-216ENST00000626000 ERCC1P07992 297 aaPredicted RBP12.15□□□□□ -0.46
SNRPA1-216ENST00000626000 FASP25445 335 aa12.15□□□□□ -0.46
SNRPA1-216ENST00000626000 LAP3P28838 519 aa12.15□□□□□ -0.46
SNRPA1-216ENST00000626000 APLNRP35414 380 aa12.15□□□□□ -0.46
SNRPA1-216ENST00000626000 CENPAP49450 140 aa12.15□□□□□ -0.46
SNRPA1-216ENST00000626000 BLVRAP53004 296 aa12.15□□□□□ -0.46
SNRPA1-216ENST00000626000 FXYD6P3P58550 94 aa12.15□□□□□ -0.46
SNRPA1-216ENST00000626000 SNRPD2P62316 118 aaKnown RBP12.15□□□□□ -0.46
SNRPA1-216ENST00000626000 NKX6-1P78426 367 aaPredicted RBP12.15□□□□□ -0.46
SNRPA1-216ENST00000626000 SPOCK1Q08629 439 aa12.15□□□□□ -0.46
SNRPA1-216ENST00000626000 AQP6Q13520 282 aa12.15□□□□□ -0.46
SNRPA1-216ENST00000626000 DAG1Q14118 895 aa12.15□□□□□ -0.46
SNRPA1-216ENST00000626000 EFNB3Q15768 340 aa12.15□□□□□ -0.46
SNRPA1-216ENST00000626000 PGGHGQ32M88 737 aa12.15□□□□□ -0.46
SNRPA1-216ENST00000626000 SLC36A3Q495N2 470 aa12.15□□□□□ -0.46
SNRPA1-216ENST00000626000 ZFP1Q6P2D0 407 aa12.15□□□□□ -0.46
SNRPA1-216ENST00000626000 SHQ1Q6PI26 577 aaKnown RBP12.15□□□□□ -0.46
SNRPA1-216ENST00000626000 ARL9Q6T311 187 aa12.15□□□□□ -0.46
SNRPA1-216ENST00000626000 LNX2Q8N448 690 aa12.15□□□□□ -0.46
SNRPA1-216ENST00000626000 SLC30A7Q8NEW0 376 aa12.15□□□□□ -0.46
SNRPA1-216ENST00000626000 NABP1Q96AH0 204 aa12.15□□□□□ -0.46
SNRPA1-216ENST00000626000 RASD2Q96D21 266 aa12.15□□□□□ -0.46
SNRPA1-216ENST00000626000 FEVQ99581 238 aa12.15□□□□□ -0.46
SNRPA1-216ENST00000626000 OSBPL10Q9BXB5 764 aa12.15□□□□□ -0.46
SNRPA1-216ENST00000626000 RACGAP1Q9H0H5 632 aa12.15□□□□□ -0.46
SNRPA1-216ENST00000626000 CDH20Q9HBT6 801 aa12.15□□□□□ -0.46
SNRPA1-216ENST00000626000 POLE4Q9NR33 117 aa12.15□□□□□ -0.46
SNRPA1-216ENST00000626000 ZNF224Q9NZL3 707 aa12.15□□□□□ -0.46
SNRPA1-216ENST00000626000 PDP1Q9P0J1 537 aaPredicted RBP12.15□□□□□ -0.46
SNRPA1-216ENST00000626000 ATPIF1Q9UII2 106 aa12.15□□□□□ -0.46
SNRPA1-216ENST00000626000 NDRG4Q9ULP0 352 aaKnown RBP12.15□□□□□ -0.46
SNRPA1-216ENST00000626000 FKBP7Q9Y680 259 aa12.15□□□□□ -0.46
SNRPA1-216ENST00000626000 OTOGQ6ZRI0 2925 aa12.14□□□□□ -0.47
SNRPA1-216ENST00000626000 ZNF503-AS2A6NEH8 195 aa12.14□□□□□ -0.47
SNRPA1-216ENST00000626000 RIIAD1A6NNX1 92 aa12.14□□□□□ -0.47
SNRPA1-216ENST00000626000 B9A039 149 aa12.14□□□□□ -0.47
SNRPA1-216ENST00000626000 H7C417 338 aa12.14□□□□□ -0.47
SNRPA1-216ENST00000626000 SOD3P08294 240 aa12.14□□□□□ -0.47
SNRPA1-216ENST00000626000 MMP7P09237 267 aaPredicted RBP12.14□□□□□ -0.47
SNRPA1-216ENST00000626000 COX5BP10606 129 aa12.14□□□□□ -0.47
SNRPA1-216ENST00000626000 ZNF35P13682 527 aa12.14□□□□□ -0.47
SNRPA1-216ENST00000626000 NR4A1P22736 598 aa12.14□□□□□ -0.47
SNRPA1-216ENST00000626000 PCSK6P29122 969 aa12.14□□□□□ -0.47
SNRPA1-216ENST00000626000 GLRXP35754 106 aa12.14□□□□□ -0.47
SNRPA1-216ENST00000626000 SERPINF1P36955 418 aa12.14□□□□□ -0.47
SNRPA1-216ENST00000626000 RAD52P43351 418 aa12.14□□□□□ -0.47
SNRPA1-216ENST00000626000 PTH2RP49190 550 aa12.14□□□□□ -0.47
SNRPA1-216ENST00000626000 EVX1P49640 407 aa12.14□□□□□ -0.47
SNRPA1-216ENST00000626000 SELENOVP59797 346 aa12.14□□□□□ -0.47
SNRPA1-216ENST00000626000 KCNMB1Q16558 191 aa12.14□□□□□ -0.47
SNRPA1-216ENST00000626000 LEG1Q6P5S2 330 aa12.14□□□□□ -0.47
SNRPA1-216ENST00000626000 YTHDF3Q7Z739 585 aaKnown RBP12.14□□□□□ -0.47
SNRPA1-216ENST00000626000 HIPK1Q86Z02 1210 aa12.14□□□□□ -0.47
SNRPA1-216ENST00000626000 LRRC18Q8N456 261 aa12.14□□□□□ -0.47
SNRPA1-216ENST00000626000 OR2T4Q8NH00 348 aa12.14□□□□□ -0.47
SNRPA1-216ENST00000626000 NEUROG1Q92886 237 aa12.14□□□□□ -0.47
SNRPA1-216ENST00000626000 ZNF75AQ96N20 296 aa12.14□□□□□ -0.47
SNRPA1-216ENST00000626000 TSSK6Q9BXA6 273 aa12.14□□□□□ -0.47
SNRPA1-216ENST00000626000 PRRG3Q9BZD7 231 aa12.14□□□□□ -0.47
SNRPA1-216ENST00000626000 BCL2L14Q9BZR8 327 aa12.14□□□□□ -0.47
SNRPA1-216ENST00000626000 NOX3Q9HBY0 568 aa12.14□□□□□ -0.47
SNRPA1-216ENST00000626000 KIF17Q9P2E2 1029 aa12.14□□□□□ -0.47
SNRPA1-216ENST00000626000 EIF3KQ9UBQ5 218 aaKnown RBP12.14□□□□□ -0.47
SNRPA1-216ENST00000626000 IL20RAQ9UHF4 553 aa12.14□□□□□ -0.47
SNRPA1-216ENST00000626000 GPR160Q9UJ42 338 aa12.14□□□□□ -0.47
SNRPA1-216ENST00000626000 KCNG2Q9UJ96 466 aa12.14□□□□□ -0.47
SNRPA1-216ENST00000626000 AP4S1Q9Y587 144 aa12.14□□□□□ -0.47
SNRPA1-216ENST00000626000 H3BN98 237 aa12.13□□□□□ -0.47
SNRPA1-216ENST00000626000 H7C1C5 153 aa12.13□□□□□ -0.47
SNRPA1-216ENST00000626000 BHLHE40O14503 412 aa12.13□□□□□ -0.47
SNRPA1-216ENST00000626000 HIST1H1CP16403 213 aaKnown RBP12.13□□□□□ -0.47
SNRPA1-216ENST00000626000 CTLA4P16410 223 aa12.13□□□□□ -0.47
SNRPA1-216ENST00000626000 ZNF3P17036 446 aa12.13□□□□□ -0.47
SNRPA1-216ENST00000626000 ZNF32P17041 273 aa12.13□□□□□ -0.47
SNRPA1-216ENST00000626000 PAICSP22234 425 aaKnown RBP12.13□□□□□ -0.47
SNRPA1-216ENST00000626000 TUBG1P23258 451 aa12.13□□□□□ -0.47
SNRPA1-216ENST00000626000 CDAP32320 146 aa12.13□□□□□ -0.47
SNRPA1-216ENST00000626000 GDI2P50395 445 aaKnown RBP12.13□□□□□ -0.47
SNRPA1-216ENST00000626000 ATP5J2P56134 94 aa12.13□□□□□ -0.47
SNRPA1-216ENST00000626000 LCN6P62502 163 aa12.13□□□□□ -0.47
SNRPA1-216ENST00000626000 SNTB2Q13425 540 aaKnown RBP12.13□□□□□ -0.47
SNRPA1-216ENST00000626000 RAB39AQ14964 217 aa12.13□□□□□ -0.47
SNRPA1-216ENST00000626000 ATP6AP1Q15904 470 aa12.13□□□□□ -0.47
SNRPA1-216ENST00000626000 PABPC1L2AQ5JQF8 200 aa12.13□□□□□ -0.47
SNRPA1-216ENST00000626000 SLC27A4Q6P1M0 643 aa12.13□□□□□ -0.47
SNRPA1-216ENST00000626000 B3GLCTQ6Y288 498 aa12.13□□□□□ -0.47
SNRPA1-216ENST00000626000 ZDHHC13Q8IUH4 622 aa12.13□□□□□ -0.47
SNRPA1-216ENST00000626000 SVOPLQ8N434 492 aa12.13□□□□□ -0.47
SNRPA1-216ENST00000626000 ATG16L2Q8NAA4 619 aa12.13□□□□□ -0.47
SNRPA1-216ENST00000626000 OR52E2Q8NGJ4 325 aa12.13□□□□□ -0.47
SNRPA1-216ENST00000626000 NUAK2Q9H093 628 aa12.13□□□□□ -0.47
SNRPA1-216ENST00000626000 EGLN3Q9H6Z9 239 aa12.13□□□□□ -0.47
SNRPA1-216ENST00000626000 TUBG2Q9NRH3 451 aa12.13□□□□□ -0.47
SNRPA1-216ENST00000626000 VNN3Q9NY84 501 aa12.13□□□□□ -0.47
SNRPA1-216ENST00000626000 POLR1DQ9Y2S0 133 aa12.13□□□□□ -0.47
SNRPA1-216ENST00000626000 CMAHPQ9Y471 501 aa12.13□□□□□ -0.47
SNRPA1-216ENST00000626000 PRRC2AP48634 2157 aaKnown RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms