RNA–Protein interactions for RNA: ENST00000620759.1

CDKN3-212, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 196 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-212ENST00000620759 TRIM40Q6P9F5 258 aa0.47□□□□□ -2.33
CDKN3-212ENST00000620759 RBM43Q6ZSC3 357 aaKnown RBP0.47□□□□□ -2.33
CDKN3-212ENST00000620759 FAM133AQ8N9E0 248 aa0.47□□□□□ -2.33
CDKN3-212ENST00000620759 SORT1Q99523 831 aa0.47□□□□□ -2.33
CDKN3-212ENST00000620759 RARRES2Q99969 163 aa0.47□□□□□ -2.33
CDKN3-212ENST00000620759 OMDQ99983 421 aa0.47□□□□□ -2.33
CDKN3-212ENST00000620759 THAP9Q9H5L6 903 aa0.47□□□□□ -2.33
CDKN3-212ENST00000620759 ASF1BQ9NVP2 202 aa0.47□□□□□ -2.33
CDKN3-212ENST00000620759 BFARQ9NZS9 450 aa0.47□□□□□ -2.33
CDKN3-212ENST00000620759 EPS15L1Q9UBC2 864 aa0.47□□□□□ -2.33
CDKN3-212ENST00000620759 TMED5Q9Y3A6 229 aa0.47□□□□□ -2.33
CDKN3-212ENST00000620759 OR10H1Q9Y4A9 318 aa0.47□□□□□ -2.33
CDKN3-212ENST00000620759 TSSC4Q9Y5U2 329 aaPredicted RBP0.47□□□□□ -2.33
CDKN3-212ENST00000620759 VWDEQ8N2E2 1590 aa0.47□□□□□ -2.33
CDKN3-212ENST00000620759 ANKRD12Q6UB98 2062 aa0.46□□□□□ -2.34
CDKN3-212ENST00000620759 IGLV10-54A0A075B6I4 117 aa0.46□□□□□ -2.34
CDKN3-212ENST00000620759 IGHV7-4-1A0A0J9YVY3 117 aa0.46□□□□□ -2.34
CDKN3-212ENST00000620759 IGLV3-25P01717 112 aa0.46□□□□□ -2.34
CDKN3-212ENST00000620759 IGLV7-43P04211 117 aa0.46□□□□□ -2.34
CDKN3-212ENST00000620759 CCNB1P14635 433 aa0.46□□□□□ -2.34
CDKN3-212ENST00000620759 RAB3BP20337 219 aa0.46□□□□□ -2.34
CDKN3-212ENST00000620759 PRLHRP49683 370 aa0.46□□□□□ -2.34
CDKN3-212ENST00000620759 ZNF83P51522 516 aa0.46□□□□□ -2.34
CDKN3-212ENST00000620759 ATP1B3P54709 279 aa0.46□□□□□ -2.34
CDKN3-212ENST00000620759 GANABQ14697 944 aaKnown RBP0.46□□□□□ -2.34
CDKN3-212ENST00000620759 DPYSL2Q16555 572 aa0.46□□□□□ -2.34
CDKN3-212ENST00000620759 DMRTC1Q5HYR2 192 aa0.46□□□□□ -2.34
CDKN3-212ENST00000620759 CPTPQ5TA50 214 aa0.46□□□□□ -2.34
CDKN3-212ENST00000620759 ANKRD22Q5VYY1 191 aa0.46□□□□□ -2.34
CDKN3-212ENST00000620759 BLOC1S2Q6QNY1 142 aa0.46□□□□□ -2.34
CDKN3-212ENST00000620759 FBXW12Q6X9E4 464 aa0.46□□□□□ -2.34
CDKN3-212ENST00000620759 NAA40Q86UY6 237 aa0.46□□□□□ -2.34
CDKN3-212ENST00000620759 PUSL1Q8N0Z8 303 aaKnown RBP0.46□□□□□ -2.34
CDKN3-212ENST00000620759 TMEM54Q969K7 222 aa0.46□□□□□ -2.34
CDKN3-212ENST00000620759 RNF145Q96MT1 663 aa0.46□□□□□ -2.34
CDKN3-212ENST00000620759 FGF23Q9GZV9 251 aaPredicted RBP0.46□□□□□ -2.34
CDKN3-212ENST00000620759 C8orf17Q9NRJ1 99 aa0.46□□□□□ -2.34
CDKN3-212ENST00000620759 RPH3ALQ9UNE2 315 aa0.46□□□□□ -2.34
CDKN3-212ENST00000620759 NOTCH1P46531 2555 aa0.46□□□□□ -2.34
CDKN3-212ENST00000620759 FAM170AA1A519 330 aa0.45□□□□□ -2.34
CDKN3-212ENST00000620759 CHADO15335 359 aa0.45□□□□□ -2.34
CDKN3-212ENST00000620759 LANCL1O43813 399 aa0.45□□□□□ -2.34
CDKN3-212ENST00000620759 REM1O75628 298 aa0.45□□□□□ -2.34
CDKN3-212ENST00000620759 DIRAS1O95057 198 aa0.45□□□□□ -2.34
CDKN3-212ENST00000620759 HSMCR30P0CW71 290 aa0.45□□□□□ -2.34
CDKN3-212ENST00000620759 UBE2NP61088 152 aaKnown RBP0.45□□□□□ -2.34
CDKN3-212ENST00000620759 CCNA1P78396 465 aa0.45□□□□□ -2.34
CDKN3-212ENST00000620759 C1orf61Q13536 156 aa0.45□□□□□ -2.34
CDKN3-212ENST00000620759 TPBGQ13641 420 aa0.45□□□□□ -2.34
CDKN3-212ENST00000620759 CEBPEQ15744 281 aa0.45□□□□□ -2.34
CDKN3-212ENST00000620759 ZSCAN26Q16670 478 aa0.45□□□□□ -2.34
CDKN3-212ENST00000620759 TEX30Q5JUR7 227 aa0.45□□□□□ -2.34
CDKN3-212ENST00000620759 AVPI1Q5T686 147 aa0.45□□□□□ -2.34
CDKN3-212ENST00000620759 MED27Q6P2C8 311 aa0.45□□□□□ -2.34
CDKN3-212ENST00000620759 PRSS54Q6PEW0 395 aa0.45□□□□□ -2.34
CDKN3-212ENST00000620759 CCDC80Q76M96 950 aa0.45□□□□□ -2.34
CDKN3-212ENST00000620759 ECHDC2Q86YB7 292 aa0.45□□□□□ -2.34
CDKN3-212ENST00000620759 OR4D5Q8NGN0 318 aa0.45□□□□□ -2.34
CDKN3-212ENST00000620759 OR8B4Q96RC9 309 aa0.45□□□□□ -2.34
CDKN3-212ENST00000620759 SECISBP2Q96T21 854 aaKnown RBP0.45□□□□□ -2.34
CDKN3-212ENST00000620759 GCOM2Q9BZD3 368 aaPredicted RBP0.45□□□□□ -2.34
CDKN3-212ENST00000620759 EIF3GO75821 320 aaKnown RBP eCLIP0.44□□□□□ -2.34
CDKN3-212ENST00000620759 HSD17B2P37059 387 aa0.44□□□□□ -2.34
CDKN3-212ENST00000620759 FDFT1P37268 417 aa0.44□□□□□ -2.34
CDKN3-212ENST00000620759 NUTF2P61970 127 aaKnown RBP0.44□□□□□ -2.34
CDKN3-212ENST00000620759 CDK16Q00536 496 aa0.44□□□□□ -2.34
CDKN3-212ENST00000620759 CDH17Q12864 832 aa0.44□□□□□ -2.34
CDKN3-212ENST00000620759 KLRB1Q12918 225 aa0.44□□□□□ -2.34
CDKN3-212ENST00000620759 TATDN3Q17R31 274 aa0.44□□□□□ -2.34
CDKN3-212ENST00000620759 SFT2D3Q587I9 215 aa0.44□□□□□ -2.34
CDKN3-212ENST00000620759 SLC38A6Q8IZM9 456 aa0.44□□□□□ -2.34
CDKN3-212ENST00000620759 METTL13Q8N6R0 699 aa0.44□□□□□ -2.34
CDKN3-212ENST00000620759 HSD17B11Q8NBQ5 300 aa0.44□□□□□ -2.34
CDKN3-212ENST00000620759 SEH1LQ96EE3 360 aa0.44□□□□□ -2.34
CDKN3-212ENST00000620759 ZFP3Q96NJ6 502 aa0.44□□□□□ -2.34
CDKN3-212ENST00000620759 MS4A4EQ96PG1 132 aa0.44□□□□□ -2.34
CDKN3-212ENST00000620759 NPY6RQ99463 290 aa0.44□□□□□ -2.34
CDKN3-212ENST00000620759 HSD17B10Q99714 261 aaKnown RBP0.44□□□□□ -2.34
CDKN3-212ENST00000620759 ZNF492Q9P255 531 aa0.44□□□□□ -2.34
CDKN3-212ENST00000620759 TRIP11Q15643 1979 aa0.44□□□□□ -2.34
CDKN3-212ENST00000620759 IGHV3-49A0A0A0MS15 119 aa0.43□□□□□ -2.34
CDKN3-212ENST00000620759 TRAV19A0A0A6YYK7 116 aa0.43□□□□□ -2.34
CDKN3-212ENST00000620759 TM7SF2O76062 418 aa0.43□□□□□ -2.34
CDKN3-212ENST00000620759 IGHV2-5P01817 119 aa0.43□□□□□ -2.34
CDKN3-212ENST00000620759 CCNG1P51959 295 aa0.43□□□□□ -2.34
CDKN3-212ENST00000620759 CDK5Q00535 292 aa0.43□□□□□ -2.34
CDKN3-212ENST00000620759 CLINT1Q14677 625 aa0.43□□□□□ -2.34
CDKN3-212ENST00000620759 SP6Q3SY56 376 aa0.43□□□□□ -2.34
CDKN3-212ENST00000620759 PTPN20Q4JDL3 420 aa0.43□□□□□ -2.34
CDKN3-212ENST00000620759 YIF1BQ5BJH7 314 aa0.43□□□□□ -2.34
CDKN3-212ENST00000620759 APOBEC3HQ6NTF7 200 aaKnown RBP0.43□□□□□ -2.34
CDKN3-212ENST00000620759 TMPPEQ6ZT21 453 aa0.43□□□□□ -2.34
CDKN3-212ENST00000620759 OR2G2Q8NGZ5 317 aa0.43□□□□□ -2.34
CDKN3-212ENST00000620759 MRGPRFQ96AM1 343 aa0.43□□□□□ -2.34
CDKN3-212ENST00000620759 HSFY1Q96LI6 401 aa0.43□□□□□ -2.34
CDKN3-212ENST00000620759 TCHPQ9BT92 498 aa0.43□□□□□ -2.34
CDKN3-212ENST00000620759 CHCHD7Q9BUK0 85 aa0.43□□□□□ -2.34
CDKN3-212ENST00000620759 FAIM2Q9BWQ8 316 aa0.43□□□□□ -2.34
CDKN3-212ENST00000620759 ELOVL3Q9HB03 270 aa0.43□□□□□ -2.34
CDKN3-212ENST00000620759 UFSP2Q9NUQ7 469 aa0.43□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms