RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 OR2T11Q8NH01 316 aa3.04□□□□□ -1.92
LPP-220ENST00000617246 ASB10Q8WXI3 467 aa3.04□□□□□ -1.92
LPP-220ENST00000617246 RORBQ92753 470 aa3.04□□□□□ -1.92
LPP-220ENST00000617246 TMBIM1Q969X1 311 aa3.04□□□□□ -1.92
LPP-220ENST00000617246 CNN2Q99439 309 aaKnown RBP3.04□□□□□ -1.92
LPP-220ENST00000617246 BHLHE40O14503 412 aa3.04□□□□□ -1.92
LPP-220ENST00000617246 SOX14O95416 240 aa3.04□□□□□ -1.92
LPP-220ENST00000617246 IL3P08700 152 aa3.04□□□□□ -1.92
LPP-220ENST00000617246 CBLP22681 906 aa3.04□□□□□ -1.92
LPP-220ENST00000617246 PSMB9P28065 219 aa3.04□□□□□ -1.92
LPP-220ENST00000617246 RBMXP38159 391 aaKnown RBP3.04□□□□□ -1.92
LPP-220ENST00000617246 RFLNBQ8N5W9 214 aa3.04□□□□□ -1.92
LPP-220ENST00000617246 SLC30A7Q8NEW0 376 aa3.04□□□□□ -1.92
LPP-220ENST00000617246 CCDC120Q96HB5 630 aa3.04□□□□□ -1.92
LPP-220ENST00000617246 C10orf90Q96M02 699 aa3.04□□□□□ -1.92
LPP-220ENST00000617246 OR2A5Q96R48 311 aa3.04□□□□□ -1.92
LPP-220ENST00000617246 NICN1Q9BSH3 213 aa3.04□□□□□ -1.92
LPP-220ENST00000617246 SMOXQ9NWM0 555 aa3.04□□□□□ -1.92
LPP-220ENST00000617246 VNN3Q9NY84 501 aa3.04□□□□□ -1.92
LPP-220ENST00000617246 FKBP11Q9NYL4 201 aa3.04□□□□□ -1.92
LPP-220ENST00000617246 PPP1R3CQ9UQK1 317 aa3.04□□□□□ -1.92
LPP-220ENST00000617246 FEZF1A0PJY2 475 aa3.04□□□□□ -1.92
LPP-220ENST00000617246 APOC4P55056 127 aa3.04□□□□□ -1.92
LPP-220ENST00000617246 RAB1AP62820 205 aa3.04□□□□□ -1.92
LPP-220ENST00000617246 REEP5Q00765 189 aa3.04□□□□□ -1.92
LPP-220ENST00000617246 NTRK2Q16620 822 aa3.04□□□□□ -1.92
LPP-220ENST00000617246 REC114Q7Z4M0 266 aa3.04□□□□□ -1.92
LPP-220ENST00000617246 PIWIL1Q96J94 861 aaKnown RBP3.04□□□□□ -1.92
LPP-220ENST00000617246 PATZ1Q9HBE1 687 aaKnown RBP3.04□□□□□ -1.92
LPP-220ENST00000617246 NTMQ9P121 344 aa3.04□□□□□ -1.92
LPP-220ENST00000617246 KIAA1324LA8MWY0 1029 aaPredicted RBP3.04□□□□□ -1.92
LPP-220ENST00000617246 B4DXG7 233 aa3.04□□□□□ -1.92
LPP-220ENST00000617246 KIR2DL1P43626 348 aaPredicted RBP3.04□□□□□ -1.92
LPP-220ENST00000617246 KIR2DL2P43627 348 aaPredicted RBP3.04□□□□□ -1.92
LPP-220ENST00000617246 RPL23AP62750 156 aaKnown RBP3.04□□□□□ -1.92
LPP-220ENST00000617246 IL13RA1P78552 427 aa3.04□□□□□ -1.92
LPP-220ENST00000617246 TMEM30BQ3MIR4 351 aa3.04□□□□□ -1.92
LPP-220ENST00000617246 INO80CQ6PI98 192 aaPredicted RBP3.04□□□□□ -1.92
LPP-220ENST00000617246 TMEM135Q86UB9 458 aa3.04□□□□□ -1.92
LPP-220ENST00000617246 ZDHHC23Q8IYP9 409 aa3.04□□□□□ -1.92
LPP-220ENST00000617246 OR2A12Q8NGT7 310 aa3.04□□□□□ -1.92
LPP-220ENST00000617246 ASB17Q8WXJ9 295 aa3.04□□□□□ -1.92
LPP-220ENST00000617246 NUDT22Q9BRQ3 303 aa3.04□□□□□ -1.92
LPP-220ENST00000617246 PCDHAC1Q9H158 963 aa3.04□□□□□ -1.92
LPP-220ENST00000617246 STOML2Q9UJZ1 356 aa3.04□□□□□ -1.92
LPP-220ENST00000617246 C1QTNF9BB2RNN3 333 aa3.04□□□□□ -1.92
LPP-220ENST00000617246 SCELO95171 688 aa3.04□□□□□ -1.92
LPP-220ENST00000617246 PRH1P02810 166 aa3.04□□□□□ -1.92
LPP-220ENST00000617246 C1QTNF9P0C862 333 aa3.04□□□□□ -1.92
LPP-220ENST00000617246 NID1P14543 1247 aa3.04□□□□□ -1.92
LPP-220ENST00000617246 SEMA3BQ13214 749 aa3.04□□□□□ -1.92
LPP-220ENST00000617246 AADACL4Q5VUY2 407 aa3.04□□□□□ -1.92
LPP-220ENST00000617246 MEDAGQ5VYS4 303 aa3.04□□□□□ -1.92
LPP-220ENST00000617246 LINC01356Q8N9X3 169 aa3.04□□□□□ -1.92
LPP-220ENST00000617246 BPIFB6Q8NFQ5 453 aa3.04□□□□□ -1.92
LPP-220ENST00000617246 OR1L1Q8NH94 360 aa3.04□□□□□ -1.92
LPP-220ENST00000617246 WDFY2Q96P53 400 aa3.04□□□□□ -1.92
LPP-220ENST00000617246 CCDC28BQ9BUN5 200 aa3.04□□□□□ -1.92
LPP-220ENST00000617246 CRIM1Q9NZV1 1036 aa3.04□□□□□ -1.92
LPP-220ENST00000617246 BOLA2-SMG1P6H3BVE0 249 aa3.04□□□□□ -1.92
LPP-220ENST00000617246 SOCS2O14508 198 aa3.04□□□□□ -1.92
LPP-220ENST00000617246 CT45A10P0DMU9 189 aa3.04□□□□□ -1.92
LPP-220ENST00000617246 CEACAM8P31997 349 aaPredicted RBP3.04□□□□□ -1.92
LPP-220ENST00000617246 PTGFRP43088 359 aa3.04□□□□□ -1.92
LPP-220ENST00000617246 AGBL4Q5VU57 503 aa3.04□□□□□ -1.92
LPP-220ENST00000617246 LCN12Q6JVE5 192 aa3.04□□□□□ -1.92
LPP-220ENST00000617246 REEP3Q6NUK4 255 aa3.04□□□□□ -1.92
LPP-220ENST00000617246 B3GLCTQ6Y288 498 aa3.04□□□□□ -1.92
LPP-220ENST00000617246 SERPINA11Q86U17 422 aa3.04□□□□□ -1.92
LPP-220ENST00000617246 DTWD1Q8N5C7 304 aa3.04□□□□□ -1.92
LPP-220ENST00000617246 CD200R1Q8TD46 325 aa3.04□□□□□ -1.92
LPP-220ENST00000617246 TRAF6Q9Y4K3 522 aa3.04□□□□□ -1.92
LPP-220ENST00000617246 CST3P01034 146 aaPredicted RBP3.03□□□□□ -1.92
LPP-220ENST00000617246 BSGP35613 385 aa3.03□□□□□ -1.92
LPP-220ENST00000617246 RPS5P46782 204 aaKnown RBP3.03□□□□□ -1.92
LPP-220ENST00000617246 RPEL1Q2QD12 228 aa3.03□□□□□ -1.92
LPP-220ENST00000617246 ALKBH6Q3KRA9 238 aa3.03□□□□□ -1.92
LPP-220ENST00000617246 CDC20BQ86Y33 519 aa3.03□□□□□ -1.92
LPP-220ENST00000617246 KRTCAP2Q8N6L1 136 aa3.03□□□□□ -1.92
LPP-220ENST00000617246 ERMAPQ96PL5 475 aaPredicted RBP3.03□□□□□ -1.92
LPP-220ENST00000617246 COA4Q9NYJ1 87 aa3.03□□□□□ -1.92
LPP-220ENST00000617246 SAMHD1Q9Y3Z3 626 aaKnown RBP3.03□□□□□ -1.92
LPP-220ENST00000617246 FAM230AA0A1W2PPH8 454 aa3.03□□□□□ -1.92
LPP-220ENST00000617246 KDM4EB2RXH2 506 aaPredicted RBP3.03□□□□□ -1.92
LPP-220ENST00000617246 AZGP1P25311 298 aaKnown RBP3.03□□□□□ -1.92
LPP-220ENST00000617246 HOXA6P31267 233 aa3.03□□□□□ -1.92
LPP-220ENST00000617246 MTCP1P56278 107 aa3.03□□□□□ -1.92
LPP-220ENST00000617246 SRPXP78539 464 aa3.03□□□□□ -1.92
LPP-220ENST00000617246 FAM189BP81408 668 aa3.03□□□□□ -1.92
LPP-220ENST00000617246 SAXO2Q658L1 398 aa3.03□□□□□ -1.92
LPP-220ENST00000617246 HUS1BQ8NHY5 278 aa3.03□□□□□ -1.92
LPP-220ENST00000617246 ZNF675Q8TD23 568 aa3.03□□□□□ -1.92
LPP-220ENST00000617246 IMP4Q96G21 291 aaKnown RBP3.03□□□□□ -1.92
LPP-220ENST00000617246 RGCCQ9H4X1 137 aa3.03□□□□□ -1.92
LPP-220ENST00000617246 DNAJC27Q9NZQ0 273 aa3.03□□□□□ -1.92
LPP-220ENST00000617246 G3V3Y1 287 aa3.03□□□□□ -1.92
LPP-220ENST00000617246 GFYI3L273 518 aa3.03□□□□□ -1.92
LPP-220ENST00000617246 K7ENP7 123 aa3.03□□□□□ -1.92
LPP-220ENST00000617246 PNPP00491 289 aa3.03□□□□□ -1.92
LPP-220ENST00000617246 SERPINA2P20848 420 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms