RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 ANOS1P23352 680 aa6.94□□□□□ -1.3
NEK3-207ENST00000617054 MAGEA5P43359 124 aa6.94□□□□□ -1.3
NEK3-207ENST00000617054 DAP3P51398 398 aaKnown RBP6.94□□□□□ -1.3
NEK3-207ENST00000617054 CCL11P51671 97 aa6.94□□□□□ -1.3
NEK3-207ENST00000617054 PPP5CP53041 499 aa6.94□□□□□ -1.3
NEK3-207ENST00000617054 CLDN15P56746 228 aa6.94□□□□□ -1.3
NEK3-207ENST00000617054 CLDN12P56749 244 aa6.94□□□□□ -1.3
NEK3-207ENST00000617054 BDH1Q02338 343 aa6.94□□□□□ -1.3
NEK3-207ENST00000617054 MFGE8Q08431 387 aaPredicted RBP6.94□□□□□ -1.3
NEK3-207ENST00000617054 FOXO1Q12778 655 aa6.94□□□□□ -1.3
NEK3-207ENST00000617054 C3AR1Q16581 482 aa6.94□□□□□ -1.3
NEK3-207ENST00000617054 BAK1Q16611 211 aa6.94□□□□□ -1.3
NEK3-207ENST00000617054 DMRTC1Q5HYR2 192 aa6.94□□□□□ -1.3
NEK3-207ENST00000617054 LRFN4Q6PJG9 635 aa6.94□□□□□ -1.3
NEK3-207ENST00000617054 NHLRC1Q6VVB1 395 aa6.94□□□□□ -1.3
NEK3-207ENST00000617054 ASCL5Q7RTU5 278 aa6.94□□□□□ -1.3
NEK3-207ENST00000617054 CCDC190Q86UF4 302 aa6.94□□□□□ -1.3
NEK3-207ENST00000617054 SCAIQ8N9R8 606 aa6.94□□□□□ -1.3
NEK3-207ENST00000617054 DNAAF1Q8NEP3 725 aa6.94□□□□□ -1.3
NEK3-207ENST00000617054 MIB2Q96AX9 1013 aa6.94□□□□□ -1.3
NEK3-207ENST00000617054 MAP6Q96JE9 813 aa6.94□□□□□ -1.3
NEK3-207ENST00000617054 SLC30A2Q9BRI3 323 aa6.94□□□□□ -1.3
NEK3-207ENST00000617054 NDEL1Q9GZM8 345 aa6.94□□□□□ -1.3
NEK3-207ENST00000617054 CMAHPQ9Y471 501 aa6.94□□□□□ -1.3
NEK3-207ENST00000617054 PCDHGB6Q9Y5F9 930 aa6.94□□□□□ -1.3
NEK3-207ENST00000617054 APC2O95996 2303 aa6.94□□□□□ -1.3
NEK3-207ENST00000617054 ACACAQ13085 2346 aa6.93□□□□□ -1.3
NEK3-207ENST00000617054 CXCL13O43927 109 aa6.93□□□□□ -1.3
NEK3-207ENST00000617054 ABHD16AO95870 558 aa6.93□□□□□ -1.3
NEK3-207ENST00000617054 QDPRP09417 244 aa6.93□□□□□ -1.3
NEK3-207ENST00000617054 SELENOPP49908 381 aa6.93□□□□□ -1.3
NEK3-207ENST00000617054 B3GALT5-AS1P59052 145 aa6.93□□□□□ -1.3
NEK3-207ENST00000617054 ZP4Q12836 540 aa6.93□□□□□ -1.3
NEK3-207ENST00000617054 MFSD13AQ14CX5 517 aa6.93□□□□□ -1.3
NEK3-207ENST00000617054 P2RY14Q15391 338 aa6.93□□□□□ -1.3
NEK3-207ENST00000617054 TAB1Q15750 504 aa6.93□□□□□ -1.3
NEK3-207ENST00000617054 ZNF79Q15937 498 aa6.93□□□□□ -1.3
NEK3-207ENST00000617054 RPL22L1Q6P5R6 122 aaKnown RBP6.93□□□□□ -1.3
NEK3-207ENST00000617054 C5orf46Q6UWT4 87 aa6.93□□□□□ -1.3
NEK3-207ENST00000617054 FAM131AQ6UXB0 335 aa6.93□□□□□ -1.3
NEK3-207ENST00000617054 ESPNLQ6ZVH7 1005 aa6.93□□□□□ -1.3
NEK3-207ENST00000617054 FAM220AQ7Z4H9 259 aa6.93□□□□□ -1.3
NEK3-207ENST00000617054 KRT77Q7Z794 578 aa6.93□□□□□ -1.3
NEK3-207ENST00000617054 GLRX5Q86SX6 157 aa6.93□□□□□ -1.3
NEK3-207ENST00000617054 ZNF295-AS1Q8N0V1 137 aa6.93□□□□□ -1.3
NEK3-207ENST00000617054 SYS1Q8N2H4 156 aa6.93□□□□□ -1.3
NEK3-207ENST00000617054 SNRNP27Q8WVK2 155 aaKnown RBP6.93□□□□□ -1.3
NEK3-207ENST00000617054 SFXN2Q96NB2 322 aa6.93□□□□□ -1.3
NEK3-207ENST00000617054 UTP23Q9BRU9 249 aaKnown RBP6.93□□□□□ -1.3
NEK3-207ENST00000617054 RASD1Q9Y272 281 aa6.93□□□□□ -1.3
NEK3-207ENST00000617054 TM4SF5O14894 197 aa6.93□□□□□ -1.3
NEK3-207ENST00000617054 LILRA1O75019 489 aa6.93□□□□□ -1.3
NEK3-207ENST00000617054 SC5DO75845 299 aa6.93□□□□□ -1.3
NEK3-207ENST00000617054 SULT1C4O75897 302 aa6.93□□□□□ -1.3
NEK3-207ENST00000617054 IGHV3-9P01782 118 aa6.93□□□□□ -1.3
NEK3-207ENST00000617054 ZNF823P16415 610 aa6.93□□□□□ -1.3
NEK3-207ENST00000617054 APEX1P27695 318 aaKnown RBP6.93□□□□□ -1.3
NEK3-207ENST00000617054 ADH6P28332 368 aa6.93□□□□□ -1.3
NEK3-207ENST00000617054 HSF2Q03933 536 aa6.93□□□□□ -1.3
NEK3-207ENST00000617054 GPR50Q13585 617 aa6.93□□□□□ -1.3
NEK3-207ENST00000617054 CARTPTQ16568 116 aa6.93□□□□□ -1.3
NEK3-207ENST00000617054 DCDC5Q6ZRR9 648 aa6.93□□□□□ -1.3
NEK3-207ENST00000617054 SLC22A16Q86VW1 577 aa6.93□□□□□ -1.3
NEK3-207ENST00000617054 DTX1Q86Y01 620 aa6.93□□□□□ -1.3
NEK3-207ENST00000617054 RAB43Q86YS6 212 aa6.93□□□□□ -1.3
NEK3-207ENST00000617054 CROCCP3Q8IVE0 287 aa6.93□□□□□ -1.3
NEK3-207ENST00000617054 ARMC10Q8N2F6 343 aa6.93□□□□□ -1.3
NEK3-207ENST00000617054 GALNT16Q8N428 558 aa6.93□□□□□ -1.3
NEK3-207ENST00000617054 LRRC18Q8N456 261 aa6.93□□□□□ -1.3
NEK3-207ENST00000617054 SLC26A10Q8NG04 563 aa6.93□□□□□ -1.3
NEK3-207ENST00000617054 OR5AK2Q8NH90 309 aa6.93□□□□□ -1.3
NEK3-207ENST00000617054 C11orf40Q8WZ69 217 aa6.93□□□□□ -1.3
NEK3-207ENST00000617054 MCHR2Q969V1 340 aa6.93□□□□□ -1.3
NEK3-207ENST00000617054 DERL3Q96Q80 235 aa6.93□□□□□ -1.3
NEK3-207ENST00000617054 PIGQQ9BRB3 760 aa6.93□□□□□ -1.3
NEK3-207ENST00000617054 MRPL13Q9BYD1 178 aaKnown RBP6.93□□□□□ -1.3
NEK3-207ENST00000617054 MROQ9BYG7 248 aa6.93□□□□□ -1.3
NEK3-207ENST00000617054 KCNN2Q9H2S1 579 aa6.93□□□□□ -1.3
NEK3-207ENST00000617054 MS4A5Q9H3V2 200 aa6.93□□□□□ -1.3
NEK3-207ENST00000617054 ASCL3Q9NQ33 180 aa6.93□□□□□ -1.3
NEK3-207ENST00000617054 V9GYH0 126 aa6.93□□□□□ -1.3
NEK3-207ENST00000617054 FABP12A6NFH5 140 aa6.93□□□□□ -1.3
NEK3-207ENST00000617054 AQP7P3A6NL99 342 aa6.93□□□□□ -1.3
NEK3-207ENST00000617054 ZNF726A6NNF4 738 aa6.93□□□□□ -1.3
NEK3-207ENST00000617054 IGHMP01871 453 aa6.93□□□□□ -1.3
NEK3-207ENST00000617054 MAS1P04201 325 aa6.93□□□□□ -1.3
NEK3-207ENST00000617054 OCM2P0CE71 109 aa6.93□□□□□ -1.3
NEK3-207ENST00000617054 PGA4P0DJD7 388 aa6.93□□□□□ -1.3
NEK3-207ENST00000617054 PGA3P0DJD8 388 aa6.93□□□□□ -1.3
NEK3-207ENST00000617054 SLC2A1P11166 492 aa6.93□□□□□ -1.3
NEK3-207ENST00000617054 CRABP1P29762 137 aa6.93□□□□□ -1.3
NEK3-207ENST00000617054 DLX5P56178 289 aa6.93□□□□□ -1.3
NEK3-207ENST00000617054 TAS2R43P59537 309 aa6.93□□□□□ -1.3
NEK3-207ENST00000617054 ALKBH1Q13686 389 aaKnown RBP6.93□□□□□ -1.3
NEK3-207ENST00000617054 RGS21Q2M5E4 152 aa6.93□□□□□ -1.3
NEK3-207ENST00000617054 WDR38Q5JTN6 314 aa6.93□□□□□ -1.3
NEK3-207ENST00000617054 LYSMD2Q8IV50 215 aa6.93□□□□□ -1.3
NEK3-207ENST00000617054 ZNF676Q8N7Q3 588 aa6.93□□□□□ -1.3
NEK3-207ENST00000617054 OR2M7Q8NG81 312 aa6.93□□□□□ -1.3
NEK3-207ENST00000617054 OR2G2Q8NGZ5 317 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms