RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 LINC00346Q8IVM7 164 aa11.63□□□□□ -0.55
TCF4-248ENST00000616053 OR8J3Q8NGG0 315 aa11.63□□□□□ -0.55
TCF4-248ENST00000616053 ZNF230Q9UIE0 474 aaPredicted RBP11.63□□□□□ -0.55
TCF4-248ENST00000616053 OR2T8A6NH00 312 aa11.63□□□□□ -0.55
TCF4-248ENST00000616053 CDK5Q00535 292 aa11.63□□□□□ -0.55
TCF4-248ENST00000616053 NKAIN1Q4KMZ8 207 aa11.63□□□□□ -0.55
TCF4-248ENST00000616053 C2CD4AQ8NCU7 369 aaPredicted RBP11.63□□□□□ -0.55
TCF4-248ENST00000616053 PTPRUQ92729 1446 aa11.63□□□□□ -0.55
TCF4-248ENST00000616053 SLC46A1Q96NT5 459 aa11.63□□□□□ -0.55
TCF4-248ENST00000616053 RYDENQ9NUL5 291 aaKnown RBP11.63□□□□□ -0.55
TCF4-248ENST00000616053 SLCO1B1Q9Y6L6 691 aa11.63□□□□□ -0.55
TCF4-248ENST00000616053 WDR1O75083 606 aa11.63□□□□□ -0.55
TCF4-248ENST00000616053 AIFM1O95831 613 aa11.63□□□□□ -0.55
TCF4-248ENST00000616053 ZNF865P0CJ78 1059 aaPredicted RBP11.63□□□□□ -0.55
TCF4-248ENST00000616053 GCSHP23434 173 aa11.63□□□□□ -0.55
TCF4-248ENST00000616053 GNG10P50151 68 aa11.63□□□□□ -0.55
TCF4-248ENST00000616053 RTP2Q5QGT7 225 aa11.63□□□□□ -0.55
TCF4-248ENST00000616053 MRPL43Q8N983 215 aaKnown RBP11.63□□□□□ -0.55
TCF4-248ENST00000616053 PCOLCE2Q9UKZ9 415 aa11.63□□□□□ -0.55
TCF4-248ENST00000616053 PPIL1Q9Y3C6 166 aa11.63□□□□□ -0.55
TCF4-248ENST00000616053 ARPC1BO15143 372 aaKnown RBP11.63□□□□□ -0.55
TCF4-248ENST00000616053 ASCL1P50553 236 aa11.63□□□□□ -0.55
TCF4-248ENST00000616053 ZNF280AP59817 542 aaPredicted RBP11.63□□□□□ -0.55
TCF4-248ENST00000616053 ZC3H3Q8IXZ2 948 aaKnown RBP11.63□□□□□ -0.55
TCF4-248ENST00000616053 PDLIM2Q96JY6 352 aa11.63□□□□□ -0.55
TCF4-248ENST00000616053 IKZF4Q9H2S9 585 aa11.63□□□□□ -0.55
TCF4-248ENST00000616053 TP53BP1Q12888 1972 aaPredicted RBP11.63□□□□□ -0.55
TCF4-248ENST00000616053 DFFBO76075 338 aa11.63□□□□□ -0.55
TCF4-248ENST00000616053 TBXA2RP21731 343 aa11.63□□□□□ -0.55
TCF4-248ENST00000616053 SLC6A11P48066 632 aa11.63□□□□□ -0.55
TCF4-248ENST00000616053 SLC25A30Q5SVS4 291 aa11.63□□□□□ -0.55
TCF4-248ENST00000616053 HRH3Q9Y5N1 445 aa11.63□□□□□ -0.55
TCF4-248ENST00000616053 GALNT2Q10471 571 aa11.62□□□□□ -0.55
TCF4-248ENST00000616053 SMAD4Q13485 552 aaKnown RBP11.62□□□□□ -0.55
TCF4-248ENST00000616053 MICBQ29980 383 aa11.62□□□□□ -0.55
TCF4-248ENST00000616053 RHOUQ7L0Q8 258 aa11.62□□□□□ -0.55
TCF4-248ENST00000616053 ARPC4-TTLL3A0A0A6YYG9 625 aa11.62□□□□□ -0.55
TCF4-248ENST00000616053 EIF3FO00303 357 aaPredicted RBP11.62□□□□□ -0.55
TCF4-248ENST00000616053 CYC1P08574 325 aa11.62□□□□□ -0.55
TCF4-248ENST00000616053 OPRK1P41145 380 aa11.62□□□□□ -0.55
TCF4-248ENST00000616053 OR10K2Q6IF99 312 aa11.62□□□□□ -0.55
TCF4-248ENST00000616053 LSMEM1Q8N8F7 131 aa11.62□□□□□ -0.55
TCF4-248ENST00000616053 VN1R2Q8NFZ6 395 aa11.62□□□□□ -0.55
TCF4-248ENST00000616053 OR1L1Q8NH94 360 aa11.62□□□□□ -0.55
TCF4-248ENST00000616053 SLC2A9Q9NRM0 540 aa11.62□□□□□ -0.55
TCF4-248ENST00000616053 R4GN57 208 aa11.62□□□□□ -0.55
TCF4-248ENST00000616053 SLC25A6P12236 298 aa11.62□□□□□ -0.55
TCF4-248ENST00000616053 NAGAP17050 411 aa11.62□□□□□ -0.55
TCF4-248ENST00000616053 DEFB103AP81534 67 aa11.62□□□□□ -0.55
TCF4-248ENST00000616053 OR1Q1Q15612 314 aa11.62□□□□□ -0.55
TCF4-248ENST00000616053 PXT1Q8NFP0 134 aa11.62□□□□□ -0.55
TCF4-248ENST00000616053 SSC4DQ8WTU2 575 aa11.62□□□□□ -0.55
TCF4-248ENST00000616053 COQ10AQ96MF6 247 aa11.62□□□□□ -0.55
TCF4-248ENST00000616053 CHST6Q9GZX3 395 aa11.62□□□□□ -0.55
TCF4-248ENST00000616053 DOCK10Q96BY6 2186 aa11.62□□□□□ -0.55
TCF4-248ENST00000616053 ILKQ13418 452 aa11.62□□□□□ -0.55
TCF4-248ENST00000616053 FAM78AQ5JUQ0 283 aa11.62□□□□□ -0.55
TCF4-248ENST00000616053 SPANXN5Q5MJ07 72 aa11.62□□□□□ -0.55
TCF4-248ENST00000616053 C6orf136Q5SQH8 315 aa11.62□□□□□ -0.55
TCF4-248ENST00000616053 CPZQ66K79 652 aa11.62□□□□□ -0.55
TCF4-248ENST00000616053 UBE2DNLQ8IWF7 75 aa11.62□□□□□ -0.55
TCF4-248ENST00000616053 OR8B3Q8NGG8 313 aa11.62□□□□□ -0.55
TCF4-248ENST00000616053 RND1Q92730 232 aa11.62□□□□□ -0.55
TCF4-248ENST00000616053 OR8B2Q96RD0 313 aa11.62□□□□□ -0.55
TCF4-248ENST00000616053 CEPT1Q9Y6K0 416 aa11.62□□□□□ -0.55
TCF4-248ENST00000616053 BRWD1Q9NSI6 2320 aa11.62□□□□□ -0.55
TCF4-248ENST00000616053 GFRA2O00451 464 aa11.62□□□□□ -0.55
TCF4-248ENST00000616053 OR3A4PP47883 348 aa11.62□□□□□ -0.55
TCF4-248ENST00000616053 HINT1P49773 126 aaPredicted RBP11.62□□□□□ -0.55
TCF4-248ENST00000616053 PCBP4P57723 403 aaKnown RBP11.62□□□□□ -0.55
TCF4-248ENST00000616053 LCN6P62502 163 aa11.62□□□□□ -0.55
TCF4-248ENST00000616053 SPATS1Q496A3 300 aa11.62□□□□□ -0.55
TCF4-248ENST00000616053 DGAT2L6Q6ZPD8 337 aa11.62□□□□□ -0.55
TCF4-248ENST00000616053 IGSF8Q969P0 613 aa11.62□□□□□ -0.55
TCF4-248ENST00000616053 SNX22Q96L94 193 aa11.62□□□□□ -0.55
TCF4-248ENST00000616053 TMEM56Q96MV1 263 aa11.62□□□□□ -0.55
TCF4-248ENST00000616053 OR6C68A6NDL8 312 aa11.62□□□□□ -0.55
TCF4-248ENST00000616053 H7C1C5 153 aa11.62□□□□□ -0.55
TCF4-248ENST00000616053 HCRTR1O43613 425 aa11.62□□□□□ -0.55
TCF4-248ENST00000616053 PBX1P40424 430 aa11.62□□□□□ -0.55
TCF4-248ENST00000616053 ZNF140P52738 457 aaPredicted RBP11.62□□□□□ -0.55
TCF4-248ENST00000616053 ACKR1Q16570 336 aa11.62□□□□□ -0.55
TCF4-248ENST00000616053 FAM43BQ6ZT52 329 aaPredicted RBP11.62□□□□□ -0.55
TCF4-248ENST00000616053 OR2T35Q8NGX2 323 aa11.62□□□□□ -0.55
TCF4-248ENST00000616053 TXLNGYQ9BZA5 131 aa11.62□□□□□ -0.55
TCF4-248ENST00000616053 IGHV3-20A0A0C4DH32 117 aa11.62□□□□□ -0.55
TCF4-248ENST00000616053 GUSBP08236 651 aa11.62□□□□□ -0.55
TCF4-248ENST00000616053 MGPP08493 103 aa11.62□□□□□ -0.55
TCF4-248ENST00000616053 INSM1Q01101 510 aaPredicted RBP11.62□□□□□ -0.55
TCF4-248ENST00000616053 OLIG2Q13516 323 aa11.62□□□□□ -0.55
TCF4-248ENST00000616053 DUSP6Q16828 381 aa11.62□□□□□ -0.55
TCF4-248ENST00000616053 PM20D1Q6GTS8 502 aa11.62□□□□□ -0.55
TCF4-248ENST00000616053 SEZ6L2Q6UXD5 910 aa11.62□□□□□ -0.55
TCF4-248ENST00000616053 PTGER1P34995 402 aa11.61□□□□□ -0.55
TCF4-248ENST00000616053 DLX1P56177 255 aa11.61□□□□□ -0.55
TCF4-248ENST00000616053 SIMC1Q8NDZ2 872 aa11.61□□□□□ -0.55
TCF4-248ENST00000616053 B3GNT7Q8NFL0 401 aa11.61□□□□□ -0.55
TCF4-248ENST00000616053 EBF4Q9BQW3 602 aa11.61□□□□□ -0.55
TCF4-248ENST00000616053 RAB19A4D1S5 217 aa11.61□□□□□ -0.55
TCF4-248ENST00000616053 TNFRSF10AO00220 468 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms