RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 HBQ1P09105 142 aa17.28■□□□□ 0.36
SPAST-203ENST00000615843 MAP2K6P52564 334 aa17.28■□□□□ 0.36
SPAST-203ENST00000615843 HAGHQ16775 308 aa17.28■□□□□ 0.36
SPAST-203ENST00000615843 FAM199XQ6PEV8 388 aaPredicted RBP17.28■□□□□ 0.36
SPAST-203ENST00000615843 ST6GAL2Q96JF0 529 aa17.28■□□□□ 0.36
SPAST-203ENST00000615843 LRFN5Q96NI6 719 aa17.28■□□□□ 0.36
SPAST-203ENST00000615843 ARV1Q9H2C2 271 aa17.28■□□□□ 0.36
SPAST-203ENST00000615843 RAB9BQ9NP90 201 aa17.28■□□□□ 0.36
SPAST-203ENST00000615843 H7BYZ3 331 aa17.28■□□□□ 0.36
SPAST-203ENST00000615843 UQCC3Q6UW78 93 aa17.28■□□□□ 0.36
SPAST-203ENST00000615843 CLEC9AQ6UXN8 241 aa17.28■□□□□ 0.36
SPAST-203ENST00000615843 GLDNQ6ZMI3 551 aaPredicted RBP17.28■□□□□ 0.36
SPAST-203ENST00000615843 OR4C16Q8NGL9 310 aa17.28■□□□□ 0.36
SPAST-203ENST00000615843 ARRDC3Q96B67 414 aa17.28■□□□□ 0.36
SPAST-203ENST00000615843 SLC35A4Q96G79 324 aa17.28■□□□□ 0.36
SPAST-203ENST00000615843 BANF2Q9H503 90 aa17.28■□□□□ 0.36
SPAST-203ENST00000615843 NWD2Q9ULI1 1742 aa17.28■□□□□ 0.36
SPAST-203ENST00000615843 IRF2P14316 349 aa17.28■□□□□ 0.36
SPAST-203ENST00000615843 RPL12P30050 165 aaKnown RBP17.28■□□□□ 0.36
SPAST-203ENST00000615843 HTR5AP47898 357 aa17.28■□□□□ 0.36
SPAST-203ENST00000615843 ZNF133P52736 654 aaPredicted RBP17.28■□□□□ 0.36
SPAST-203ENST00000615843 IKZF1Q13422 519 aa17.28■□□□□ 0.36
SPAST-203ENST00000615843 TMEM31Q5JXX7 168 aa17.28■□□□□ 0.36
SPAST-203ENST00000615843 FAM219BQ5XKK7 198 aa17.28■□□□□ 0.36
SPAST-203ENST00000615843 SDF2Q99470 211 aa17.28■□□□□ 0.36
SPAST-203ENST00000615843 HCSTQ9UBK5 93 aa17.28■□□□□ 0.36
SPAST-203ENST00000615843 ARID1BQ8NFD5 2236 aaPredicted RBP17.28■□□□□ 0.36
SPAST-203ENST00000615843 HCRTR1O43613 425 aa17.27■□□□□ 0.36
SPAST-203ENST00000615843 DUSP22Q9NRW4 184 aa17.27■□□□□ 0.36
SPAST-203ENST00000615843 CBY1Q9Y3M2 126 aa17.27■□□□□ 0.36
SPAST-203ENST00000615843 NXPH3O95157 252 aa17.27■□□□□ 0.36
SPAST-203ENST00000615843 CD37P11049 281 aa17.27■□□□□ 0.36
SPAST-203ENST00000615843 FCRL6Q6DN72 434 aa17.27■□□□□ 0.36
SPAST-203ENST00000615843 STAC2Q6ZMT1 411 aa17.27■□□□□ 0.36
SPAST-203ENST00000615843 SEH1LQ96EE3 360 aa17.27■□□□□ 0.36
SPAST-203ENST00000615843 SLC6A17Q9H1V8 727 aa17.27■□□□□ 0.36
SPAST-203ENST00000615843 OR51B6Q9H340 312 aa17.27■□□□□ 0.36
SPAST-203ENST00000615843 MEIKINA0A087WXM9 373 aa17.27■□□□□ 0.36
SPAST-203ENST00000615843 CRYBB2P43320 205 aa17.27■□□□□ 0.36
SPAST-203ENST00000615843 ARHGAP11BQ3KRB8 267 aa17.27■□□□□ 0.36
SPAST-203ENST00000615843 GALNT16Q8N428 558 aa17.27■□□□□ 0.36
SPAST-203ENST00000615843 OR5M1Q8NGP8 315 aa17.27■□□□□ 0.36
SPAST-203ENST00000615843 SLC22A12Q96S37 553 aa17.27■□□□□ 0.36
SPAST-203ENST00000615843 BCL2L10Q9HD36 194 aa17.27■□□□□ 0.36
SPAST-203ENST00000615843 WSB2Q9NYS7 404 aaPredicted RBP17.27■□□□□ 0.36
SPAST-203ENST00000615843 OSGIN2Q9Y236 505 aa17.27■□□□□ 0.36
SPAST-203ENST00000615843 LOC107986453A0A1B0GWG9 222 aa17.27■□□□□ 0.35
SPAST-203ENST00000615843 PRAMEF26H0Y7S4 382 aa17.27■□□□□ 0.35
SPAST-203ENST00000615843 TGOLN2O43493 480 aa17.27■□□□□ 0.35
SPAST-203ENST00000615843 IL5P05113 134 aa17.27■□□□□ 0.35
SPAST-203ENST00000615843 NQO2P16083 231 aa17.27■□□□□ 0.35
SPAST-203ENST00000615843 PTAFRP25105 342 aa17.27■□□□□ 0.35
SPAST-203ENST00000615843 DUSP1P28562 367 aa17.27■□□□□ 0.35
SPAST-203ENST00000615843 CSF2RBP32927 897 aa17.27■□□□□ 0.35
SPAST-203ENST00000615843 NKX2-1P43699 371 aaPredicted RBP17.27■□□□□ 0.35
SPAST-203ENST00000615843 RNF151Q2KHN1 245 aa17.27■□□□□ 0.35
SPAST-203ENST00000615843 OR5L1Q8NGL2 311 aa17.27■□□□□ 0.35
SPAST-203ENST00000615843 NKX2-4Q9H2Z4 354 aa17.27■□□□□ 0.35
SPAST-203ENST00000615843 SLC6A13Q9NSD5 602 aa17.27■□□□□ 0.35
SPAST-203ENST00000615843 GAR1Q9NY12 217 aaKnown RBP17.27■□□□□ 0.35
SPAST-203ENST00000615843 PRRC2BQ5JSZ5 2229 aaKnown RBP17.27■□□□□ 0.35
SPAST-203ENST00000615843 CTNSO60931 367 aa17.26■□□□□ 0.35
SPAST-203ENST00000615843 FGF9P31371 208 aaPredicted RBP17.26■□□□□ 0.35
SPAST-203ENST00000615843 LIM2P55344 173 aa17.26■□□□□ 0.35
SPAST-203ENST00000615843 GABREP78334 506 aa17.26■□□□□ 0.35
SPAST-203ENST00000615843 RPUSD3Q6P087 351 aaKnown RBP17.26■□□□□ 0.35
SPAST-203ENST00000615843 PIGTQ969N2 578 aa17.26■□□□□ 0.35
SPAST-203ENST00000615843 SLC46A1Q96NT5 459 aa17.26■□□□□ 0.35
SPAST-203ENST00000615843 DERL3Q96Q80 235 aa17.26■□□□□ 0.35
SPAST-203ENST00000615843 MGST1P10620 155 aaKnown RBP17.26■□□□□ 0.35
SPAST-203ENST00000615843 C12orf73Q69YU5 71 aa17.26■□□□□ 0.35
SPAST-203ENST00000615843 ADAMTSL4Q6UY14 1074 aa17.26■□□□□ 0.35
SPAST-203ENST00000615843 WFDC5Q8TCV5 224 aa17.26■□□□□ 0.35
SPAST-203ENST00000615843 TRAV1-2A0A0B4J238 106 aa17.26■□□□□ 0.35
SPAST-203ENST00000615843 HSPB6O14558 160 aa17.26■□□□□ 0.35
SPAST-203ENST00000615843 BMPR1AP36894 532 aa17.26■□□□□ 0.35
SPAST-203ENST00000615843 DUSP3P51452 185 aaPredicted RBP17.26■□□□□ 0.35
SPAST-203ENST00000615843 CLDN17P56750 224 aa17.26■□□□□ 0.35
SPAST-203ENST00000615843 C2orf76Q3KRA6 126 aa17.26■□□□□ 0.35
SPAST-203ENST00000615843 LYG2Q86SG7 212 aa17.26■□□□□ 0.35
SPAST-203ENST00000615843 C15orf54Q8N8G6 183 aa17.26■□□□□ 0.35
SPAST-203ENST00000615843 TMPRSS11DO60235 418 aa17.26■□□□□ 0.35
SPAST-203ENST00000615843 TMEM176BQ3YBM2 270 aaPredicted RBP17.26■□□□□ 0.35
SPAST-203ENST00000615843 TMEM81Q6P7N7 255 aa17.26■□□□□ 0.35
SPAST-203ENST00000615843 CYHR1Q6ZMK1 362 aa17.26■□□□□ 0.35
SPAST-203ENST00000615843 NAXDQ8IW45 347 aa17.26■□□□□ 0.35
SPAST-203ENST00000615843 FKRPQ9H9S5 495 aa17.26■□□□□ 0.35
SPAST-203ENST00000615843 PDFQ9HBH1 243 aa17.26■□□□□ 0.35
SPAST-203ENST00000615843 COA3Q9Y2R0 106 aaPredicted RBP17.26■□□□□ 0.35
SPAST-203ENST00000615843 PIAS3Q9Y6X2 628 aa17.26■□□□□ 0.35
SPAST-203ENST00000615843 TRBV11-1A0A0K0K1C0 115 aa17.25■□□□□ 0.35
SPAST-203ENST00000615843 TSPAN12O95859 305 aa17.25■□□□□ 0.35
SPAST-203ENST00000615843 THBS3P49746 956 aa17.25■□□□□ 0.35
SPAST-203ENST00000615843 TRMT12Q53H54 448 aaKnown RBP17.25■□□□□ 0.35
SPAST-203ENST00000615843 PYCR3Q53H96 274 aa17.25■□□□□ 0.35
SPAST-203ENST00000615843 FAM58AQ8N1B3 248 aa17.25■□□□□ 0.35
SPAST-203ENST00000615843 TCTN2Q96GX1 697 aa17.25■□□□□ 0.35
SPAST-203ENST00000615843 RHOFQ9HBH0 211 aa17.25■□□□□ 0.35
SPAST-203ENST00000615843 RFPL4AA6NLU0 287 aa17.25■□□□□ 0.35
SPAST-203ENST00000615843 RFPL4AL1F8VTS6 287 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms