RNA–Protein interactions for RNA: ENST00000615653.1

HMGB1P24-202, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 685 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-202ENST00000615653 HPGDSO60760 199 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 MPDU1O75352 247 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 LYPLA2O95372 231 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 KRT75O95678 551 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 SNAP29O95721 258 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 RAB36O95755 333 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 ANGPTL1O95841 491 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 IGSF6O95976 241 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 DHFRP00374 187 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 CA1P00915 261 aaPredicted RBP2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 ORM1P02763 201 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 CALB1P05937 261 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 GP1BAP07359 652 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 GP1BBP13224 206 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 UCHL3P15374 230 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 HIST1H1CP16403 213 aaKnown RBP2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 MGMTP16455 207 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 HLA-GP17693 338 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 CELP19835 753 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 PVALBP20472 110 aaPredicted RBP2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 ME2P23368 584 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 CRABP2P29373 138 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 IL12AP29459 219 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 TGFBR2P37173 567 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 YAP1P46937 504 aaKnown RBP2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 RGRP47804 291 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 QARSP47897 775 aaKnown RBP2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 CSNK1A1P48729 337 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 IDH3GP51553 393 aaPredicted RBP2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 RAG2P55895 527 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 OR4D2P58180 307 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 SPCS3P61009 180 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 RHOAP61586 193 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 TLE4Q04727 773 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 AESQ08117 197 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 C2orf80Q0P641 193 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 RAB40BQ12829 278 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 TAF10Q12962 218 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 BNIP2Q12982 314 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 GNMTQ14749 295 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 PON3Q15166 354 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 PTGES3Q15185 160 aaKnown RBP2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 PSMD5Q16401 504 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 GABRA6Q16445 453 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 C3AR1Q16581 482 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 PGGHGQ32M88 737 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 CCDC58Q4VC31 144 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 PHLDA2Q53GA4 152 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 SOHLH1Q5JUK2 328 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 SPIN3Q5JUX0 258 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 C1orf220Q5T0J3 134 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 DCAF12Q5T6F0 453 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 HES5Q5TA89 166 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 FAHD2BQ6P2I3 314 aaPredicted RBP2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 PNCKQ6P2M8 343 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 BTNL3Q6UXE8 466 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 CD300LGQ6UXG3 332 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 LRRN1Q6UXK5 716 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 ZNF730Q6ZMV8 503 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 NUFIP2Q7Z417 695 aaKnown RBP2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 CEACAM19Q7Z692 300 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 MRPL52Q86TS9 123 aaKnown RBP2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 KCNMB4Q86W47 210 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 ZC3H3Q8IXZ2 948 aaKnown RBP2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 CMTM1Q8IZ96 169 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 KIRREL3Q8IZU9 778 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 RIBC1Q8N443 379 aaPredicted RBP2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 GVQW1Q8N7I0 195 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 MAPKAPK5-AS1Q8N8E1 139 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 ATP6V0D2Q8N8Y2 350 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 CATSPER1Q8NEC5 780 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 OR7A2PQ8NGA2 310 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 OR5L2Q8NGL0 311 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 OR10G8Q8NGN5 311 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 OR1B1Q8NGR6 318 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 OR4C3Q8NH37 302 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 OR52N5Q8NH56 324 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 OR5K2Q8NHB8 316 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 ITFG1Q8TB96 612 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 PIGXQ8TBF5 258 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 GPR148Q8TDV2 347 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 DOK4Q8TEW6 326 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 TFB1MQ8WVM0 346 aaKnown RBP2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 APH1BQ8WW43 257 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 IL1F10Q8WWZ1 152 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 PIK3R3Q92569 461 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 BADQ92934 168 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 ART4Q93070 314 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 PTH2Q96A98 100 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 RPEQ96AT9 228 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 DGCR14Q96DF8 476 aaKnown RBP2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 FAHD2AQ96GK7 314 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 C18orf12Q96KH6 178 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 C4orf45Q96LM5 186 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 C10orf90Q96M02 699 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 CPXM1Q96SM3 734 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 SLC35A5Q9BS91 424 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 BEX2Q9BXY8 128 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 METTL9Q9H1A3 318 aa2.16□□□□□ -2.06
HMGB1P24-202ENST00000615653 LHX5Q9H2C1 402 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms