RNA–Protein interactions for RNA: ENST00000613795.4

CLCN3-211, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,874 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-211ENST00000613795 Q6ZSR6 202 aa6.32□□□□□ -1.4
CLCN3-211ENST00000613795 FJX1Q86VR8 437 aa6.32□□□□□ -1.4
CLCN3-211ENST00000613795 TP53INP2Q8IXH6 220 aa6.32□□□□□ -1.4
CLCN3-211ENST00000613795 L3MBTL4Q8NA19 623 aa6.32□□□□□ -1.4
CLCN3-211ENST00000613795 ADPRHL1Q8NDY3 354 aa6.32□□□□□ -1.4
CLCN3-211ENST00000613795 OR51A4Q8NGJ6 313 aa6.32□□□□□ -1.4
CLCN3-211ENST00000613795 OR6K3Q8NGY3 331 aa6.32□□□□□ -1.4
CLCN3-211ENST00000613795 WDR83Q9BRX9 315 aaKnown RBP6.32□□□□□ -1.4
CLCN3-211ENST00000613795 TMEM59Q9BXS4 323 aa6.32□□□□□ -1.4
CLCN3-211ENST00000613795 C1orf198Q9H425 327 aa6.32□□□□□ -1.4
CLCN3-211ENST00000613795 SLC35D1Q9NTN3 355 aa6.32□□□□□ -1.4
CLCN3-211ENST00000613795 ACER3Q9NUN7 267 aa6.32□□□□□ -1.4
CLCN3-211ENST00000613795 ATXN7L1Q9ULK2 861 aaPredicted RBP6.32□□□□□ -1.4
CLCN3-211ENST00000613795 BOKQ9UMX3 212 aaPredicted RBP6.32□□□□□ -1.4
CLCN3-211ENST00000613795 HS3ST2Q9Y278 367 aa6.32□□□□□ -1.4
CLCN3-211ENST00000613795 PQLC2LA1A4F0 135 aa6.32□□□□□ -1.4
CLCN3-211ENST00000613795 FAM166BA8MTA8 275 aa6.32□□□□□ -1.4
CLCN3-211ENST00000613795 H0YIV9 168 aa6.32□□□□□ -1.4
CLCN3-211ENST00000613795 H3BQ06 376 aaPredicted RBP6.32□□□□□ -1.4
CLCN3-211ENST00000613795 TK1P04183 234 aa6.32□□□□□ -1.4
CLCN3-211ENST00000613795 HMGN2P05204 90 aaKnown RBP6.32□□□□□ -1.4
CLCN3-211ENST00000613795 CHRM4P08173 479 aa6.32□□□□□ -1.4
CLCN3-211ENST00000613795 RPL29P47914 159 aaKnown RBP6.32□□□□□ -1.4
CLCN3-211ENST00000613795 NOVA1P51513 510 aaKnown RBP6.32□□□□□ -1.4
CLCN3-211ENST00000613795 CEBPEQ15744 281 aa6.32□□□□□ -1.4
CLCN3-211ENST00000613795 ST3GAL2Q16842 350 aa6.32□□□□□ -1.4
CLCN3-211ENST00000613795 PKDCCQ504Y2 493 aa6.32□□□□□ -1.4
CLCN3-211ENST00000613795 NCR3LG1Q68D85 454 aa6.32□□□□□ -1.4
CLCN3-211ENST00000613795 TOMM20LQ6UXN7 152 aa6.32□□□□□ -1.4
CLCN3-211ENST00000613795 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.32□□□□□ -1.42e-8■■□□□ 13
CLCN3-211ENST00000613795 AMIGO3Q86WK7 504 aa6.32□□□□□ -1.4
CLCN3-211ENST00000613795 OR2L13Q8N349 312 aa6.32□□□□□ -1.4
CLCN3-211ENST00000613795 ZNF426Q9BUY5 554 aa6.32□□□□□ -1.4
CLCN3-211ENST00000613795 C1QTNF3Q9BXJ4 246 aa6.32□□□□□ -1.4
CLCN3-211ENST00000613795 WWTR1Q9GZV5 400 aa6.32□□□□□ -1.4
CLCN3-211ENST00000613795 SIDT1Q9NXL6 827 aaKnown RBP6.32□□□□□ -1.4
CLCN3-211ENST00000613795 B3GALT5Q9Y2C3 310 aa6.32□□□□□ -1.4
CLCN3-211ENST00000613795 TRPM3Q9HCF6 1732 aaPredicted RBP6.32□□□□□ -1.4
CLCN3-211ENST00000613795 NUP98P52948 1817 aa6.32□□□□□ -1.4
CLCN3-211ENST00000613795 C4AP0C0L4 1744 aa6.32□□□□□ -1.4
CLCN3-211ENST00000613795 MCRIP1C9JLW8 97 aa6.32□□□□□ -1.4
CLCN3-211ENST00000613795 CLDN34H7C241 214 aa6.32□□□□□ -1.4
CLCN3-211ENST00000613795 SOCS6O14544 535 aa6.32□□□□□ -1.4
CLCN3-211ENST00000613795 NDUFB6O95139 128 aa6.32□□□□□ -1.4
CLCN3-211ENST00000613795 GYPBP06028 91 aa6.32□□□□□ -1.4
CLCN3-211ENST00000613795 GCH1P30793 250 aa6.32□□□□□ -1.4
CLCN3-211ENST00000613795 RRADP55042 308 aa6.32□□□□□ -1.4
CLCN3-211ENST00000613795 FOXK2Q01167 660 aa6.32□□□□□ -1.4
CLCN3-211ENST00000613795 MDGA1Q8NFP4 955 aa6.32□□□□□ -1.4
CLCN3-211ENST00000613795 SLC38A5Q8WUX1 472 aa6.32□□□□□ -1.4
CLCN3-211ENST00000613795 PPP1R1CQ8WVI7 109 aa6.32□□□□□ -1.4
CLCN3-211ENST00000613795 ASB11Q8WXH4 323 aa6.32□□□□□ -1.4
CLCN3-211ENST00000613795 ARV1Q9H2C2 271 aa6.32□□□□□ -1.4
CLCN3-211ENST00000613795 WDR76Q9H967 626 aa6.32□□□□□ -1.4
CLCN3-211ENST00000613795 NGBQ9NPG2 151 aa6.32□□□□□ -1.4
CLCN3-211ENST00000613795 GPR55Q9Y2T6 319 aaPredicted RBP6.32□□□□□ -1.4
CLCN3-211ENST00000613795 YTHDF2Q9Y5A9 579 aaKnown RBP6.32□□□□□ -1.4
CLCN3-211ENST00000613795 NRAPQ86VF7 1730 aa6.32□□□□□ -1.4
CLCN3-211ENST00000613795 TRAV27A0A087WT01 109 aa6.32□□□□□ -1.4
CLCN3-211ENST00000613795 ZNF354AO60765 605 aaPredicted RBP6.32□□□□□ -1.4
CLCN3-211ENST00000613795 CEBPBP17676 345 aa6.32□□□□□ -1.4
CLCN3-211ENST00000613795 EXOSC6Q5RKV6 272 aaKnown RBP6.32□□□□□ -1.4
CLCN3-211ENST00000613795 CMTM4Q8IZR5 234 aa6.32□□□□□ -1.4
CLCN3-211ENST00000613795 SYS1Q8N2H4 156 aa6.32□□□□□ -1.4
CLCN3-211ENST00000613795 OR52E1Q8NGJ3 308 aa6.32□□□□□ -1.4
CLCN3-211ENST00000613795 EXTL1Q92935 676 aa6.32□□□□□ -1.4
CLCN3-211ENST00000613795 NEURL3Q96EH8 262 aa6.32□□□□□ -1.4
CLCN3-211ENST00000613795 SDSLQ96GA7 329 aa6.32□□□□□ -1.4
CLCN3-211ENST00000613795 UCK1Q9HA47 277 aa6.32□□□□□ -1.4
CLCN3-211ENST00000613795 UBQLN4Q9NRR5 601 aa6.32□□□□□ -1.4
CLCN3-211ENST00000613795 MYH13Q9UKX3 1938 aa6.32□□□□□ -1.4
CLCN3-211ENST00000613795 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.32□□□□□ -1.4
CLCN3-211ENST00000613795 HSPB2A8KAH6 182 aa6.32□□□□□ -1.4
CLCN3-211ENST00000613795 FAM171A2A8MVW0 826 aa6.32□□□□□ -1.4
CLCN3-211ENST00000613795 K7ERU9 68 aa6.32□□□□□ -1.4
CLCN3-211ENST00000613795 TNFSF12O43508 249 aa6.32□□□□□ -1.4
CLCN3-211ENST00000613795 GLSO94925 669 aaPredicted RBP6.32□□□□□ -1.4
CLCN3-211ENST00000613795 CST4P01036 141 aa6.32□□□□□ -1.4
CLCN3-211ENST00000613795 STATHP02808 62 aa6.32□□□□□ -1.4
CLCN3-211ENST00000613795 CRYBA1P05813 215 aa6.32□□□□□ -1.4
CLCN3-211ENST00000613795 QDPRP09417 244 aa6.32□□□□□ -1.4
CLCN3-211ENST00000613795 OMGP23515 440 aa6.32□□□□□ -1.4
CLCN3-211ENST00000613795 DTYMKP23919 212 aa6.32□□□□□ -1.4
CLCN3-211ENST00000613795 CXCL12P48061 93 aa6.32□□□□□ -1.4
CLCN3-211ENST00000613795 RPS18P62269 152 aaKnown RBP6.32□□□□□ -1.4
CLCN3-211ENST00000613795 REEP5Q00765 189 aa6.32□□□□□ -1.4
CLCN3-211ENST00000613795 HSPB2Q16082 182 aa6.32□□□□□ -1.4
CLCN3-211ENST00000613795 OR2B11Q5JQS5 317 aa6.32□□□□□ -1.4
CLCN3-211ENST00000613795 OR2A2Q6IF42 318 aa6.32□□□□□ -1.4
CLCN3-211ENST00000613795 ZNF600Q6ZNG1 722 aa6.32□□□□□ -1.4
CLCN3-211ENST00000613795 GCNT2Q8N0V5 402 aa6.32□□□□□ -1.4
CLCN3-211ENST00000613795 NLGN4XQ8N0W4 816 aa6.32□□□□□ -1.4
CLCN3-211ENST00000613795 CHST14Q8NCH0 376 aa6.32□□□□□ -1.4
CLCN3-211ENST00000613795 GCDHQ92947 438 aaPredicted RBP6.32□□□□□ -1.4
CLCN3-211ENST00000613795 EGLN2Q96KS0 407 aa6.32□□□□□ -1.4
CLCN3-211ENST00000613795 IL17FQ96PD4 163 aa6.32□□□□□ -1.4
CLCN3-211ENST00000613795 LYSMD1Q96S90 227 aa6.32□□□□□ -1.4
CLCN3-211ENST00000613795 ARHGDIGQ99819 225 aa6.32□□□□□ -1.4
CLCN3-211ENST00000613795 SLC35B3Q9H1N7 401 aa6.32□□□□□ -1.4
CLCN3-211ENST00000613795 DCAF16Q9NXF7 216 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms