RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 RAB6AP20340 208 aa11.32□□□□□ -0.6
CDH1-212ENST00000611625 IL32P24001 234 aa11.32□□□□□ -0.6
CDH1-212ENST00000611625 GABREP78334 506 aa11.32□□□□□ -0.6
CDH1-212ENST00000611625 EXOSC6Q5RKV6 272 aaKnown RBP11.32□□□□□ -0.6
CDH1-212ENST00000611625 SLC25A30Q5SVS4 291 aa11.32□□□□□ -0.6
CDH1-212ENST00000611625 PXDC1Q5TGL8 231 aa11.32□□□□□ -0.6
CDH1-212ENST00000611625 RHOUQ7L0Q8 258 aa11.32□□□□□ -0.6
CDH1-212ENST00000611625 ETFBKMTQ8IXQ9 262 aa11.32□□□□□ -0.6
CDH1-212ENST00000611625 RNF141Q8WVD5 230 aa11.32□□□□□ -0.6
CDH1-212ENST00000611625 OR11A1Q9GZK7 315 aa11.32□□□□□ -0.6
CDH1-212ENST00000611625 NXF2Q9GZY0 626 aaKnown RBP11.32□□□□□ -0.6
CDH1-212ENST00000611625 FBXO34Q9NWN3 711 aa11.32□□□□□ -0.6
CDH1-212ENST00000611625 FBXL4Q9UKA2 621 aa11.32□□□□□ -0.6
CDH1-212ENST00000611625 RGS13O14921 159 aa11.31□□□□□ -0.6
CDH1-212ENST00000611625 ICOSLGO75144 302 aa11.31□□□□□ -0.6
CDH1-212ENST00000611625 EN2P19622 333 aaPredicted RBP11.31□□□□□ -0.6
CDH1-212ENST00000611625 LSM11P83369 360 aaKnown RBP eCLIP11.31□□□□□ -0.6
CDH1-212ENST00000611625 DBPQ10586 325 aaPredicted RBP11.31□□□□□ -0.6
CDH1-212ENST00000611625 KCNAB1Q14722 419 aa11.31□□□□□ -0.6
CDH1-212ENST00000611625 OTPQ5XKR4 325 aa11.31□□□□□ -0.6
CDH1-212ENST00000611625 MDGA2Q7Z553 956 aa11.31□□□□□ -0.6
CDH1-212ENST00000611625 LIX1LQ8IVB5 337 aa11.31□□□□□ -0.6
CDH1-212ENST00000611625 OR4C16Q8NGL9 310 aa11.31□□□□□ -0.6
CDH1-212ENST00000611625 JAM3Q9BX67 310 aa11.31□□□□□ -0.6
CDH1-212ENST00000611625 METTL9Q9H1A3 318 aa11.31□□□□□ -0.6
CDH1-212ENST00000611625 CHRNA9Q9UGM1 479 aa11.31□□□□□ -0.6
CDH1-212ENST00000611625 ZNF175Q9Y473 711 aa11.31□□□□□ -0.6
CDH1-212ENST00000611625 SEC16AO15027 2179 aa11.31□□□□□ -0.6
CDH1-212ENST00000611625 A0A1B0GX78 115 aa11.31□□□□□ -0.6
CDH1-212ENST00000611625 OR2W5A6NFC9 320 aa11.31□□□□□ -0.6
CDH1-212ENST00000611625 IFNA1P01562 189 aa11.31□□□□□ -0.6
CDH1-212ENST00000611625 SEMG1P04279 462 aa11.31□□□□□ -0.6
CDH1-212ENST00000611625 M6PRP20645 277 aa11.31□□□□□ -0.6
CDH1-212ENST00000611625 RFX2P48378 723 aa11.31□□□□□ -0.6
CDH1-212ENST00000611625 MTCP1P56278 107 aa11.31□□□□□ -0.6
CDH1-212ENST00000611625 PLA2G7Q13093 441 aa11.31□□□□□ -0.6
CDH1-212ENST00000611625 SLC17A1Q14916 467 aa11.31□□□□□ -0.6
CDH1-212ENST00000611625 TCTN1Q2MV58 587 aa11.31□□□□□ -0.6
CDH1-212ENST00000611625 TMEM81Q6P7N7 255 aa11.31□□□□□ -0.6
CDH1-212ENST00000611625 S100PBPQ96BU1 408 aa11.31□□□□□ -0.6
CDH1-212ENST00000611625 RSPRY1Q96DX4 576 aa11.31□□□□□ -0.6
CDH1-212ENST00000611625 OR2A5Q96R48 311 aa11.31□□□□□ -0.6
CDH1-212ENST00000611625 ABHD1Q96SE0 405 aa11.31□□□□□ -0.6
CDH1-212ENST00000611625 EMC6Q9BV81 110 aa11.31□□□□□ -0.6
CDH1-212ENST00000611625 PRSS37A4D1T9 235 aa11.31□□□□□ -0.6
CDH1-212ENST00000611625 ZNF254O75437 659 aa11.31□□□□□ -0.6
CDH1-212ENST00000611625 WNT1P04628 370 aa11.31□□□□□ -0.6
CDH1-212ENST00000611625 APEHP13798 732 aaKnown RBP11.31□□□□□ -0.6
CDH1-212ENST00000611625 NPY4RP50391 375 aa11.31□□□□□ -0.6
CDH1-212ENST00000611625 SRYQ05066 204 aa11.31□□□□□ -0.6
CDH1-212ENST00000611625 FAM53BQ14153 422 aa11.31□□□□□ -0.6
CDH1-212ENST00000611625 PEA15Q15121 130 aa11.31□□□□□ -0.6
CDH1-212ENST00000611625 C14orf28Q4W4Y0 310 aa11.31□□□□□ -0.6
CDH1-212ENST00000611625 PGAP1Q75T13 922 aa11.31□□□□□ -0.6
CDH1-212ENST00000611625 MRPL21Q7Z2W9 205 aaKnown RBP11.31□□□□□ -0.6
CDH1-212ENST00000611625 LRRC18Q8N456 261 aa11.31□□□□□ -0.6
CDH1-212ENST00000611625 ZSCAN4Q8NAM6 433 aaPredicted RBP11.31□□□□□ -0.6
CDH1-212ENST00000611625 FGF14Q92915 247 aa11.31□□□□□ -0.6
CDH1-212ENST00000611625 RNF32Q9H0A6 362 aa11.31□□□□□ -0.6
CDH1-212ENST00000611625 IGHV3-20A0A0C4DH32 117 aa11.31□□□□□ -0.6
CDH1-212ENST00000611625 FTCDNL1E5RQL4 147 aa11.31□□□□□ -0.6
CDH1-212ENST00000611625 BCAT2O15382 392 aaPredicted RBP11.31□□□□□ -0.6
CDH1-212ENST00000611625 AKR7A3O95154 331 aa11.31□□□□□ -0.6
CDH1-212ENST00000611625 CPT2P23786 658 aa11.31□□□□□ -0.6
CDH1-212ENST00000611625 MAP2K6P52564 334 aa11.31□□□□□ -0.6
CDH1-212ENST00000611625 ATP1B3P54709 279 aa11.31□□□□□ -0.6
CDH1-212ENST00000611625 RPS15P62841 145 aaKnown RBP11.31□□□□□ -0.6
CDH1-212ENST00000611625 CMTM3Q96MX0 182 aa11.31□□□□□ -0.6
CDH1-212ENST00000611625 C1orf123Q9NWV4 160 aa11.31□□□□□ -0.6
CDH1-212ENST00000611625 SLCO1C1Q9NYB5 712 aa11.31□□□□□ -0.6
CDH1-212ENST00000611625 LUZP4Q9P127 313 aa11.31□□□□□ -0.6
CDH1-212ENST00000611625 POMT2Q9UKY4 750 aa11.31□□□□□ -0.6
CDH1-212ENST00000611625 LOC102725191A0A1B0GVB3 256 aa11.3□□□□□ -0.6
CDH1-212ENST00000611625 A0A1W2PS29 197 aa11.3□□□□□ -0.6
CDH1-212ENST00000611625 GCM2O75603 506 aaPredicted RBP11.3□□□□□ -0.6
CDH1-212ENST00000611625 CNOT4O95628 575 aaKnown RBP11.3□□□□□ -0.6
CDH1-212ENST00000611625 NTN1O95631 604 aa11.3□□□□□ -0.6
CDH1-212ENST00000611625 CAPZBP47756 277 aa11.3□□□□□ -0.6
CDH1-212ENST00000611625 RAG2P55895 527 aa11.3□□□□□ -0.6
CDH1-212ENST00000611625 SLC35A1P78382 337 aa11.3□□□□□ -0.6
CDH1-212ENST00000611625 EBPQ15125 230 aaKnown RBP11.3□□□□□ -0.6
CDH1-212ENST00000611625 GPR157Q5UAW9 335 aa11.3□□□□□ -0.6
CDH1-212ENST00000611625 ZNF425Q6IV72 752 aa11.3□□□□□ -0.6
CDH1-212ENST00000611625 TMPPEQ6ZT21 453 aa11.3□□□□□ -0.6
CDH1-212ENST00000611625 PRSS41Q7RTY9 318 aa11.3□□□□□ -0.6
CDH1-212ENST00000611625 SIGLEC11Q96RL6 698 aa11.3□□□□□ -0.6
CDH1-212ENST00000611625 PTDSS2Q9BVG9 487 aa11.3□□□□□ -0.6
CDH1-212ENST00000611625 BIN3Q9NQY0 253 aa11.3□□□□□ -0.6
CDH1-212ENST00000611625 H0YIG0 161 aa11.3□□□□□ -0.6
CDH1-212ENST00000611625 ARPC3O15145 178 aa11.3□□□□□ -0.6
CDH1-212ENST00000611625 PLA2G10O15496 165 aa11.3□□□□□ -0.6
CDH1-212ENST00000611625 CD27P26842 260 aa11.3□□□□□ -0.6
CDH1-212ENST00000611625 FOLR3P41439 243 aa11.3□□□□□ -0.6
CDH1-212ENST00000611625 MFAP5Q13361 173 aa11.3□□□□□ -0.6
CDH1-212ENST00000611625 NR0B2Q15466 257 aa11.3□□□□□ -0.6
CDH1-212ENST00000611625 MRM1Q6IN84 353 aaKnown RBP11.3□□□□□ -0.6
CDH1-212ENST00000611625 FJX1Q86VR8 437 aa11.3□□□□□ -0.6
CDH1-212ENST00000611625 MARC2Q969Z3 335 aa11.3□□□□□ -0.6
CDH1-212ENST00000611625 ZNF707Q96C28 371 aaPredicted RBP11.3□□□□□ -0.6
CDH1-212ENST00000611625 MYO16Q9Y6X6 1858 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms