RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 OR2T12Q8NG77 320 aa6.49□□□□□ -1.37
CUX1-219ENST00000606749 OR51F2Q8NH61 342 aa6.49□□□□□ -1.37
CUX1-219ENST00000606749 SNX33Q8WV41 574 aa6.49□□□□□ -1.37
CUX1-219ENST00000606749 LZICQ8WZA0 190 aa6.49□□□□□ -1.37
CUX1-219ENST00000606749 MARS2Q96GW9 593 aaKnown RBP6.49□□□□□ -1.37
CUX1-219ENST00000606749 PRRC1Q96M27 445 aa6.49□□□□□ -1.37
CUX1-219ENST00000606749 RBP7Q96R05 134 aa6.49□□□□□ -1.37
CUX1-219ENST00000606749 ALG12Q9BV10 488 aa6.49□□□□□ -1.37
CUX1-219ENST00000606749 WNT5BQ9H1J7 359 aa6.49□□□□□ -1.37
CUX1-219ENST00000606749 OCEL1Q9H607 264 aa6.49□□□□□ -1.37
CUX1-219ENST00000606749 METTL17Q9H7H0 456 aaPredicted RBP6.49□□□□□ -1.37
CUX1-219ENST00000606749 LPAR2Q9HBW0 351 aa6.49□□□□□ -1.37
CUX1-219ENST00000606749 DECR2Q9NUI1 292 aa6.49□□□□□ -1.37
CUX1-219ENST00000606749 CMTM6Q9NX76 183 aa6.49□□□□□ -1.37
CUX1-219ENST00000606749 KLHL21Q9UJP4 597 aa6.49□□□□□ -1.37
CUX1-219ENST00000606749 GRIP1Q9Y3R0 1128 aa6.49□□□□□ -1.37
CUX1-219ENST00000606749 SNX13Q9Y5W8 968 aa6.49□□□□□ -1.37
CUX1-219ENST00000606749 STAB1Q9NY15 2570 aa6.49□□□□□ -1.37
CUX1-219ENST00000606749 A0A0A6YYJ9 748 aa6.48□□□□□ -1.37
CUX1-219ENST00000606749 TRAV20A0A0B4J274 112 aa6.48□□□□□ -1.37
CUX1-219ENST00000606749 C5orf49A4QMS7 147 aa6.48□□□□□ -1.37
CUX1-219ENST00000606749 GMNCA6NCL1 334 aa6.48□□□□□ -1.37
CUX1-219ENST00000606749 J3KTA2 159 aa6.48□□□□□ -1.37
CUX1-219ENST00000606749 FFAR1O14842 300 aa6.48□□□□□ -1.37
CUX1-219ENST00000606749 TPD52L2O43399 206 aaKnown RBP6.48□□□□□ -1.37
CUX1-219ENST00000606749 VENTXO95231 258 aa6.48□□□□□ -1.37
CUX1-219ENST00000606749 NGFP01138 241 aa6.48□□□□□ -1.37
CUX1-219ENST00000606749 AVPP01185 164 aa6.48□□□□□ -1.37
CUX1-219ENST00000606749 IGHV1-46P01743 117 aa6.48□□□□□ -1.37
CUX1-219ENST00000606749 SCG5P05408 212 aa6.48□□□□□ -1.37
CUX1-219ENST00000606749 CST2P09228 141 aa6.48□□□□□ -1.37
CUX1-219ENST00000606749 NR2C1P13056 603 aa6.48□□□□□ -1.37
CUX1-219ENST00000606749 DRD4P21917 467 aa6.48□□□□□ -1.37
CUX1-219ENST00000606749 LAP3P28838 519 aa6.48□□□□□ -1.37
CUX1-219ENST00000606749 GCH1P30793 250 aa6.48□□□□□ -1.37
CUX1-219ENST00000606749 IFNA8P32881 189 aa6.48□□□□□ -1.37
CUX1-219ENST00000606749 MPV17P39210 176 aa6.48□□□□□ -1.37
CUX1-219ENST00000606749 GUCA1AP43080 201 aaPredicted RBP6.48□□□□□ -1.37
CUX1-219ENST00000606749 GDI2P50395 445 aaKnown RBP6.48□□□□□ -1.37
CUX1-219ENST00000606749 ZNF81P51508 661 aa6.48□□□□□ -1.37
CUX1-219ENST00000606749 MMP15P51511 669 aa6.48□□□□□ -1.37
CUX1-219ENST00000606749 GLO1Q04760 184 aa6.48□□□□□ -1.37
CUX1-219ENST00000606749 TOP3AQ13472 1001 aaPredicted RBP6.48□□□□□ -1.37
CUX1-219ENST00000606749 TSTQ16762 297 aaKnown RBP6.48□□□□□ -1.37
CUX1-219ENST00000606749 HFEQ30201 348 aa6.48□□□□□ -1.37
CUX1-219ENST00000606749 ANKDD1AQ495B1 522 aa6.48□□□□□ -1.37
CUX1-219ENST00000606749 SPATA46Q5T0L3 261 aa6.48□□□□□ -1.37
CUX1-219ENST00000606749 MBNL2Q5VZF2 373 aaKnown RBP6.48□□□□□ -1.37
CUX1-219ENST00000606749 FAHD2BQ6P2I3 314 aaPredicted RBP6.48□□□□□ -1.37
CUX1-219ENST00000606749 TBPL2Q6SJ96 375 aa6.48□□□□□ -1.37
CUX1-219ENST00000606749 UNQ6126/PRO20091Q6UXV3 157 aa6.48□□□□□ -1.37
CUX1-219ENST00000606749 C1orf229Q6ZS94 237 aaPredicted RBP6.48□□□□□ -1.37
CUX1-219ENST00000606749 FOXL2NBQ6ZUU3 175 aa6.48□□□□□ -1.37
CUX1-219ENST00000606749 USP51Q70EK9 711 aa6.48□□□□□ -1.37
CUX1-219ENST00000606749 VTCN1Q7Z7D3 282 aa6.48□□□□□ -1.37
CUX1-219ENST00000606749 OAFQ86UD1 273 aa6.48□□□□□ -1.37
CUX1-219ENST00000606749 IGFN1Q86VF2 1251 aa6.48□□□□□ -1.37
CUX1-219ENST00000606749 MEX3DQ86XN8 651 aaKnown RBP6.48□□□□□ -1.37
CUX1-219ENST00000606749 NRMQ8IXM6 262 aa6.48□□□□□ -1.37
CUX1-219ENST00000606749 SLC15A3Q8IY34 581 aa6.48□□□□□ -1.37
CUX1-219ENST00000606749 C1orf174Q8IYL3 243 aa6.48□□□□□ -1.37
CUX1-219ENST00000606749 ALDH16A1Q8IZ83 802 aa6.48□□□□□ -1.37
CUX1-219ENST00000606749 RNF113BQ8IZP6 322 aaKnown RBP6.48□□□□□ -1.37
CUX1-219ENST00000606749 OR51A7Q8NH64 312 aa6.48□□□□□ -1.37
CUX1-219ENST00000606749 SLC25A40Q8TBP6 338 aa6.48□□□□□ -1.37
CUX1-219ENST00000606749 FNDC8Q8TC99 324 aa6.48□□□□□ -1.37
CUX1-219ENST00000606749 KLF14Q8TD94 323 aaPredicted RBP6.48□□□□□ -1.37
CUX1-219ENST00000606749 FAHD2AQ96GK7 314 aa6.48□□□□□ -1.37
CUX1-219ENST00000606749 FNDC11Q9BVV2 318 aa6.48□□□□□ -1.37
CUX1-219ENST00000606749 OR2H1Q9GZK4 316 aa6.48□□□□□ -1.37
CUX1-219ENST00000606749 OR2J1Q9GZK6 312 aa6.48□□□□□ -1.37
CUX1-219ENST00000606749 MAN2C1Q9NTJ4 1040 aa6.48□□□□□ -1.37
CUX1-219ENST00000606749 ARMCX1Q9P291 453 aa6.48□□□□□ -1.37
CUX1-219ENST00000606749 GMPR2Q9P2T1 348 aaKnown RBP6.48□□□□□ -1.37
CUX1-219ENST00000606749 RHCGQ9UBD6 479 aa6.48□□□□□ -1.37
CUX1-219ENST00000606749 AP3M1Q9Y2T2 418 aa6.48□□□□□ -1.37
CUX1-219ENST00000606749 TIMM10BQ9Y5J6 103 aa6.48□□□□□ -1.37
CUX1-219ENST00000606749 CACNG2Q9Y698 323 aa6.48□□□□□ -1.37
CUX1-219ENST00000606749 TRAV27A0A087WT01 109 aa6.47□□□□□ -1.37
CUX1-219ENST00000606749 A0A087WUU8 490 aa6.47□□□□□ -1.37
CUX1-219ENST00000606749 PLSCR5A0PG75 271 aa6.47□□□□□ -1.37
CUX1-219ENST00000606749 A6NIZ1 184 aa6.47□□□□□ -1.37
CUX1-219ENST00000606749 EFCAB9A8MZ26 197 aa6.47□□□□□ -1.37
CUX1-219ENST00000606749 CLDN25C9JDP6 229 aa6.47□□□□□ -1.37
CUX1-219ENST00000606749 SLC22A2O15244 555 aa6.47□□□□□ -1.37
CUX1-219ENST00000606749 SPRY3O43610 288 aa6.47□□□□□ -1.37
CUX1-219ENST00000606749 PLPP2O43688 288 aa6.47□□□□□ -1.37
CUX1-219ENST00000606749 ICMTO60725 284 aa6.47□□□□□ -1.37
CUX1-219ENST00000606749 DEAF1O75398 565 aaPredicted RBP6.47□□□□□ -1.37
CUX1-219ENST00000606749 MPZL1O95297 269 aa6.47□□□□□ -1.37
CUX1-219ENST00000606749 PNPP00491 289 aa6.47□□□□□ -1.37
CUX1-219ENST00000606749 IFNW1P05000 195 aa6.47□□□□□ -1.37
CUX1-219ENST00000606749 LIPAP38571 399 aa6.47□□□□□ -1.37
CUX1-219ENST00000606749 RAP1BP61224 184 aa6.47□□□□□ -1.37
CUX1-219ENST00000606749 PCBD1P61457 104 aa6.47□□□□□ -1.37
CUX1-219ENST00000606749 PPP1CBP62140 327 aa6.47□□□□□ -1.37
CUX1-219ENST00000606749 RAP1AP62834 184 aa6.47□□□□□ -1.37
CUX1-219ENST00000606749 LIPEQ05469 1076 aa6.47□□□□□ -1.37
CUX1-219ENST00000606749 ENDOGQ14249 297 aaKnown RBP6.47□□□□□ -1.37
CUX1-219ENST00000606749 TRAM2Q15035 370 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms