RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 IGHV3-13P01766 116 aa13.52□□□□□ -0.25
VRK3-221ENST00000600284 MT-ND5P03915 603 aa13.52□□□□□ -0.25
VRK3-221ENST00000600284 CST2P09228 141 aa13.52□□□□□ -0.25
VRK3-221ENST00000600284 ZNF32P17041 273 aa13.52□□□□□ -0.25
VRK3-221ENST00000600284 PCMT1P22061 227 aa13.52□□□□□ -0.25
VRK3-221ENST00000600284 IL2RGP31785 369 aa13.52□□□□□ -0.25
VRK3-221ENST00000600284 GSK3BP49841 420 aa13.52□□□□□ -0.25
VRK3-221ENST00000600284 PCBD1P61457 104 aa13.52□□□□□ -0.25
VRK3-221ENST00000600284 FMODQ06828 376 aa13.52□□□□□ -0.25
VRK3-221ENST00000600284 TOP3AQ13472 1001 aaPredicted RBP13.52□□□□□ -0.25
VRK3-221ENST00000600284 FHL1Q13642 323 aa13.52□□□□□ -0.25
VRK3-221ENST00000600284 TRIP10Q15642 601 aa13.52□□□□□ -0.25
VRK3-221ENST00000600284 CR1LQ2VPA4 569 aa13.52□□□□□ -0.25
VRK3-221ENST00000600284 ZNF730Q6ZMV8 503 aa13.52□□□□□ -0.25
VRK3-221ENST00000600284 FOXL2NBQ6ZUU3 175 aa13.52□□□□□ -0.25
VRK3-221ENST00000600284 TMPRSS11FQ6ZWK6 438 aa13.52□□□□□ -0.25
VRK3-221ENST00000600284 RRM2BQ7LG56 351 aa13.52□□□□□ -0.25
VRK3-221ENST00000600284 SYT9Q86SS6 491 aa13.52□□□□□ -0.25
VRK3-221ENST00000600284 CYP4Z1Q86W10 505 aa13.52□□□□□ -0.25
VRK3-221ENST00000600284 OR51A7Q8NH64 312 aa13.52□□□□□ -0.25
VRK3-221ENST00000600284 HSH2DQ96JZ2 352 aa13.52□□□□□ -0.25
VRK3-221ENST00000600284 RACGAP1Q9H0H5 632 aa13.52□□□□□ -0.25
VRK3-221ENST00000600284 GMPR2Q9P2T1 348 aaKnown RBP13.52□□□□□ -0.25
VRK3-221ENST00000600284 RHCGQ9UBD6 479 aa13.52□□□□□ -0.25
VRK3-221ENST00000600284 ABCD2Q9UBJ2 740 aa13.52□□□□□ -0.25
VRK3-221ENST00000600284 RPS6KA6Q9UK32 745 aa13.52□□□□□ -0.25
VRK3-221ENST00000600284 TIMM10BQ9Y5J6 103 aa13.52□□□□□ -0.25
VRK3-221ENST00000600284 TRAV27A0A087WT01 109 aa13.51□□□□□ -0.25
VRK3-221ENST00000600284 B4DSR2 109 aa13.51□□□□□ -0.25
VRK3-221ENST00000600284 ATP8B1O43520 1251 aa13.51□□□□□ -0.25
VRK3-221ENST00000600284 ICMTO60725 284 aa13.51□□□□□ -0.25
VRK3-221ENST00000600284 TFP02787 698 aa13.51□□□□□ -0.25
VRK3-221ENST00000600284 FUT4P22083 530 aa13.51□□□□□ -0.25
VRK3-221ENST00000600284 GDI2P50395 445 aaKnown RBP13.51□□□□□ -0.25
VRK3-221ENST00000600284 DVL1P1P54792 670 aaPredicted RBP13.51□□□□□ -0.25
VRK3-221ENST00000600284 PSG4Q00888 419 aa13.51□□□□□ -0.25
VRK3-221ENST00000600284 TEKQ02763 1124 aa13.51□□□□□ -0.25
VRK3-221ENST00000600284 ZNF718Q3SXZ3 478 aa13.51□□□□□ -0.25
VRK3-221ENST00000600284 TREML1Q86YW5 311 aa13.51□□□□□ -0.25
VRK3-221ENST00000600284 PHC2Q8IXK0 858 aa13.51□□□□□ -0.25
VRK3-221ENST00000600284 OR1J1Q8NGS3 322 aa13.51□□□□□ -0.25
VRK3-221ENST00000600284 FAM162AQ96A26 154 aa13.51□□□□□ -0.25
VRK3-221ENST00000600284 TSPAN32Q96QS1 320 aa13.51□□□□□ -0.25
VRK3-221ENST00000600284 KCTD14Q9BQ13 255 aaPredicted RBP13.51□□□□□ -0.25
VRK3-221ENST00000600284 NDEL1Q9GZM8 345 aa13.51□□□□□ -0.25
VRK3-221ENST00000600284 NMNAT1Q9HAN9 279 aaPredicted RBP13.51□□□□□ -0.25
VRK3-221ENST00000600284 ZNF275Q9NSD4 429 aaPredicted RBP13.51□□□□□ -0.25
VRK3-221ENST00000600284 TMEFF2Q9UIK5 374 aaPredicted RBP13.51□□□□□ -0.25
VRK3-221ENST00000600284 TMEM5Q9Y2B1 443 aa13.51□□□□□ -0.25
VRK3-221ENST00000600284 ENPP4Q9Y6X5 453 aa13.51□□□□□ -0.25
VRK3-221ENST00000600284 LOC100509620A0A075B734 347 aa13.5□□□□□ -0.25
VRK3-221ENST00000600284 RP2O75695 350 aa13.5□□□□□ -0.25
VRK3-221ENST00000600284 NCR1O76036 304 aa13.5□□□□□ -0.25
VRK3-221ENST00000600284 CD14P08571 375 aa13.5□□□□□ -0.25
VRK3-221ENST00000600284 DRD4P21917 467 aa13.5□□□□□ -0.25
VRK3-221ENST00000600284 CCNOP22674 350 aa13.5□□□□□ -0.25
VRK3-221ENST00000600284 LAP3P28838 519 aa13.5□□□□□ -0.25
VRK3-221ENST00000600284 PRDX6P30041 224 aa13.5□□□□□ -0.25
VRK3-221ENST00000600284 GCH1P30793 250 aa13.5□□□□□ -0.25
VRK3-221ENST00000600284 CRYBB2P43320 205 aa13.5□□□□□ -0.25
VRK3-221ENST00000600284 MAGEB1P43366 347 aa13.5□□□□□ -0.25
VRK3-221ENST00000600284 NUDT2P50583 147 aa13.5□□□□□ -0.25
VRK3-221ENST00000600284 ERVS71-1P61550 626 aa13.5□□□□□ -0.25
VRK3-221ENST00000600284 ERVK-25P63136 954 aa13.5□□□□□ -0.25
VRK3-221ENST00000600284 ZBED5Q49AG3 693 aa13.5□□□□□ -0.25
VRK3-221ENST00000600284 FAM209AQ5JX71 171 aa13.5□□□□□ -0.25
VRK3-221ENST00000600284 IGFN1Q86VF2 1251 aa13.5□□□□□ -0.25
VRK3-221ENST00000600284 CLDND2Q8NHS1 167 aa13.5□□□□□ -0.25
VRK3-221ENST00000600284 YIPF5Q969M3 257 aa13.5□□□□□ -0.25
VRK3-221ENST00000600284 OR2H1Q9GZK4 316 aa13.5□□□□□ -0.25
VRK3-221ENST00000600284 MYLK2Q9H1R3 596 aa13.5□□□□□ -0.25
VRK3-221ENST00000600284 OR51B6Q9H340 312 aa13.5□□□□□ -0.25
VRK3-221ENST00000600284 GRHPRQ9UBQ7 328 aa13.5□□□□□ -0.25
VRK3-221ENST00000600284 A0A1W2PRQ8 180 aa13.49□□□□□ -0.25
VRK3-221ENST00000600284 C5orf49A4QMS7 147 aa13.49□□□□□ -0.25
VRK3-221ENST00000600284 C12orf71A8MTZ7 269 aa13.49□□□□□ -0.25
VRK3-221ENST00000600284 H3BSA7 217 aa13.49□□□□□ -0.25
VRK3-221ENST00000600284 CDC42EP2O14613 210 aa13.49□□□□□ -0.25
VRK3-221ENST00000600284 PPIHO43447 177 aaKnown RBP13.49□□□□□ -0.25
VRK3-221ENST00000600284 RHCEP18577 417 aa13.49□□□□□ -0.25
VRK3-221ENST00000600284 MSR1P21757 451 aa13.49□□□□□ -0.25
VRK3-221ENST00000600284 RPL4P36578 427 aaKnown RBP13.49□□□□□ -0.25
VRK3-221ENST00000600284 LIPAP38571 399 aa13.49□□□□□ -0.25
VRK3-221ENST00000600284 PSME3P61289 254 aa13.49□□□□□ -0.25
VRK3-221ENST00000600284 CCNIQ14094 377 aa13.49□□□□□ -0.25
VRK3-221ENST00000600284 DGCR6Q14129 220 aa13.49□□□□□ -0.25
VRK3-221ENST00000600284 ALKBH6Q3KRA9 238 aa13.49□□□□□ -0.25
VRK3-221ENST00000600284 MBNL2Q5VZF2 373 aaKnown RBP13.49□□□□□ -0.25
VRK3-221ENST00000600284 TBPL2Q6SJ96 375 aa13.49□□□□□ -0.25
VRK3-221ENST00000600284 ARL9Q6T311 187 aa13.49□□□□□ -0.25
VRK3-221ENST00000600284 IL17RELQ6ZVW7 336 aa13.49□□□□□ -0.25
VRK3-221ENST00000600284 TSEN54Q7Z6J9 526 aaKnown RBP13.49□□□□□ -0.25
VRK3-221ENST00000600284 CLDN22Q8N7P3 220 aa13.49□□□□□ -0.25
VRK3-221ENST00000600284 ICA1LQ8NDH6 482 aa13.49□□□□□ -0.25
VRK3-221ENST00000600284 OR13C2Q8NGS9 318 aa13.49□□□□□ -0.25
VRK3-221ENST00000600284 AKR7LQ8NHP1 331 aa13.49□□□□□ -0.25
VRK3-221ENST00000600284 SLC7A13Q8TCU3 470 aa13.49□□□□□ -0.25
VRK3-221ENST00000600284 MARS2Q96GW9 593 aaKnown RBP13.49□□□□□ -0.25
VRK3-221ENST00000600284 ELAC2Q9BQ52 826 aaKnown RBP13.49□□□□□ -0.25
VRK3-221ENST00000600284 WNT5BQ9H1J7 359 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms