RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	LAP3	P28838	519 aa		19.26	■□□□□ 0.67
LTBP4-227	ENST00000600026	HTR1F	P30939	366 aa		19.26	■□□□□ 0.67
LTBP4-227	ENST00000600026	FMO3	P31513	532 aa		19.26	■□□□□ 0.67
LTBP4-227	ENST00000600026	PEX19	P40855	299 aa		19.26	■□□□□ 0.67
LTBP4-227	ENST00000600026	ETFDH	Q16134	617 aa		19.26	■□□□□ 0.67
LTBP4-227	ENST00000600026	GLB1L2	Q8IW92	636 aa		19.26	■□□□□ 0.67
LTBP4-227	ENST00000600026	STEAP2	Q8NFT2	490 aa		19.26	■□□□□ 0.67
LTBP4-227	ENST00000600026	OR51L1	Q8NGJ5	315 aa		19.26	■□□□□ 0.67
LTBP4-227	ENST00000600026	TEAD3	Q99594	435 aa		19.26	■□□□□ 0.67
LTBP4-227	ENST00000600026	HDHD5	Q9BXW7	423 aa		19.26	■□□□□ 0.67
LTBP4-227	ENST00000600026	ACTR6	Q9GZN1	396 aa		19.26	■□□□□ 0.67
LTBP4-227	ENST00000600026	OR10A4	Q9H209	315 aa		19.26	■□□□□ 0.67
LTBP4-227	ENST00000600026	CIB4	A0PJX0	185 aa		19.25	■□□□□ 0.67
LTBP4-227	ENST00000600026	FAM171A2	A8MVW0	826 aa		19.25	■□□□□ 0.67
LTBP4-227	ENST00000600026	SH3BGR	P55822	239 aa	Predicted RBP	19.25	■□□□□ 0.67
LTBP4-227	ENST00000600026	CSNK2B	P67870	215 aa		19.25	■□□□□ 0.67
LTBP4-227	ENST00000600026	C6orf141	Q5SZD1	244 aa		19.25	■□□□□ 0.67
LTBP4-227	ENST00000600026	LINC01560	Q8TB33	94 aa		19.25	■□□□□ 0.67
LTBP4-227	ENST00000600026	S100PBP	Q96BU1	408 aa		19.25	■□□□□ 0.67
LTBP4-227	ENST00000600026	ZNF837	Q96EG3	531 aa	Predicted RBP	19.25	■□□□□ 0.67
LTBP4-227	ENST00000600026	SPOCK3	Q9BQ16	436 aa		19.25	■□□□□ 0.67
LTBP4-227	ENST00000600026	SEC61A2	Q9H9S3	476 aa		19.25	■□□□□ 0.67
LTBP4-227	ENST00000600026	LRCH1	Q9Y2L9	728 aa		19.25	■□□□□ 0.67
LTBP4-227	ENST00000600026	RPL36	Q9Y3U8	105 aa	Known RBP	19.25	■□□□□ 0.67
LTBP4-227	ENST00000600026	CCDC182	A6NF36	153 aa		19.24	■□□□□ 0.67
LTBP4-227	ENST00000600026	TUBAL3	A6NHL2	446 aa		19.24	■□□□□ 0.67
LTBP4-227	ENST00000600026	ZNF99	A8MXY4	864 aa	Predicted RBP	19.24	■□□□□ 0.67
LTBP4-227	ENST00000600026	COX6B1	P14854	86 aa		19.24	■□□□□ 0.67
LTBP4-227	ENST00000600026	NUDT6	P53370	316 aa		19.24	■□□□□ 0.67
LTBP4-227	ENST00000600026	TGFBR3	Q03167	851 aa		19.24	■□□□□ 0.67
LTBP4-227	ENST00000600026	GABRA6	Q16445	453 aa		19.24	■□□□□ 0.67
LTBP4-227	ENST00000600026	OR10H5	Q8NGA6	315 aa		19.24	■□□□□ 0.67
LTBP4-227	ENST00000600026	ZMYND19	Q96E35	227 aa	Predicted RBP	19.24	■□□□□ 0.67
LTBP4-227	ENST00000600026	FOXB1	Q99853	325 aa		19.24	■□□□□ 0.67
LTBP4-227	ENST00000600026	FAM20B	O75063	409 aa		19.23	■□□□□ 0.67
LTBP4-227	ENST00000600026	NPR2	P20594	1047 aa		19.23	■□□□□ 0.67
LTBP4-227	ENST00000600026	GSTT1	P30711	240 aa		19.23	■□□□□ 0.67
LTBP4-227	ENST00000600026	KIR2DL3	P43628	341 aa		19.23	■□□□□ 0.67
LTBP4-227	ENST00000600026	CXCR4	P61073	352 aa		19.23	■□□□□ 0.67
LTBP4-227	ENST00000600026	MRPS34	P82930	218 aa	Known RBP	19.23	■□□□□ 0.67
LTBP4-227	ENST00000600026	ARF1	P84077	181 aa	Known RBP	19.23	■□□□□ 0.67
LTBP4-227	ENST00000600026	HSF2	Q03933	536 aa		19.23	■□□□□ 0.67
LTBP4-227	ENST00000600026	DBP	Q10586	325 aa	Predicted RBP	19.23	■□□□□ 0.67
LTBP4-227	ENST00000600026	POU4F2	Q12837	409 aa		19.23	■□□□□ 0.67
LTBP4-227	ENST00000600026	SGCA	Q16586	387 aa		19.23	■□□□□ 0.67
LTBP4-227	ENST00000600026	SMN1	Q16637	294 aa	Known RBP	19.23	■□□□□ 0.67
LTBP4-227	ENST00000600026	LINC01590	Q5TEZ4	76 aa		19.23	■□□□□ 0.67
LTBP4-227	ENST00000600026	ZNF813	Q6ZN06	617 aa		19.23	■□□□□ 0.67
LTBP4-227	ENST00000600026	FOXL2NB	Q6ZUU3	175 aa		19.23	■□□□□ 0.67
LTBP4-227	ENST00000600026	C22orf34	Q6ZV56	151 aa		19.23	■□□□□ 0.67
LTBP4-227	ENST00000600026	C1orf162	Q8NEQ5	155 aa	Predicted RBP	19.23	■□□□□ 0.67
LTBP4-227	ENST00000600026	BPIFB6	Q8NFQ5	453 aa		19.23	■□□□□ 0.67
LTBP4-227	ENST00000600026	OR1K1	Q8NGR3	316 aa		19.23	■□□□□ 0.67
LTBP4-227	ENST00000600026	ZNRF4	Q8WWF5	429 aa		19.23	■□□□□ 0.67
LTBP4-227	ENST00000600026	FOXN4	Q96NZ1	517 aa		19.23	■□□□□ 0.67
LTBP4-227	ENST00000600026	WFIKKN1	Q96NZ8	548 aa		19.23	■□□□□ 0.67
LTBP4-227	ENST00000600026	TMEM38B	Q9NVV0	291 aa		19.23	■□□□□ 0.67
LTBP4-227	ENST00000600026	SCN3B	Q9NY72	215 aa		19.23	■□□□□ 0.67
LTBP4-227	ENST00000600026	HAO2	Q9NYQ3	351 aa		19.23	■□□□□ 0.67
LTBP4-227	ENST00000600026	UBAP1	Q9NZ09	502 aa		19.23	■□□□□ 0.67
LTBP4-227	ENST00000600026	CRIM1	Q9NZV1	1036 aa		19.23	■□□□□ 0.67
LTBP4-227	ENST00000600026	NDRG3	Q9UGV2	375 aa		19.23	■□□□□ 0.67
LTBP4-227	ENST00000600026	UGT2A1	Q9Y4X1	527 aa		19.23	■□□□□ 0.67
LTBP4-227	ENST00000600026	PPP3CB	P16298	524 aa		19.22	■□□□□ 0.67
LTBP4-227	ENST00000600026	ZNF823	P16415	610 aa		19.22	■□□□□ 0.67
LTBP4-227	ENST00000600026	CDA	P32320	146 aa		19.22	■□□□□ 0.67
LTBP4-227	ENST00000600026	ATP6V1E1	P36543	226 aa		19.22	■□□□□ 0.67
LTBP4-227	ENST00000600026	MTNR1A	P48039	350 aa		19.22	■□□□□ 0.67
LTBP4-227	ENST00000600026	ZNF91	Q05481	1191 aa		19.22	■□□□□ 0.67
LTBP4-227	ENST00000600026	KLHL22	Q53GT1	634 aa		19.22	■□□□□ 0.67
LTBP4-227	ENST00000600026	ZNF786	Q8N393	782 aa		19.22	■□□□□ 0.67
LTBP4-227	ENST00000600026	RNFT2	Q96EX2	444 aa		19.22	■□□□□ 0.67
LTBP4-227	ENST00000600026	MED18	Q9BUE0	208 aa		19.22	■□□□□ 0.67
LTBP4-227	ENST00000600026	NELFA	Q9H3P2	528 aa		19.22	■□□□□ 0.67
LTBP4-227	ENST00000600026	AMBN	Q9NP70	447 aa		19.22	■□□□□ 0.67
LTBP4-227	ENST00000600026	PLCXD1	Q9NUJ7	323 aa		19.22	■□□□□ 0.67
LTBP4-227	ENST00000600026	UTP20	O75691	2785 aa	Known RBP	19.21	■□□□□ 0.67
LTBP4-227	ENST00000600026	IRGM	A1A4Y4	181 aa		19.21	■□□□□ 0.67
LTBP4-227	ENST00000600026	TVP23A	A6NH52	213 aa		19.21	■□□□□ 0.67
LTBP4-227	ENST00000600026	SEC14L2	O76054	403 aa		19.21	■□□□□ 0.67
LTBP4-227	ENST00000600026	FARS2	O95363	451 aa	Known RBP	19.21	■□□□□ 0.67
LTBP4-227	ENST00000600026	HRG	P04196	525 aa		19.21	■□□□□ 0.67
LTBP4-227	ENST00000600026	GAA	P10253	952 aa		19.21	■□□□□ 0.67
LTBP4-227	ENST00000600026	DBT	P11182	482 aa	Known RBP	19.21	■□□□□ 0.67
LTBP4-227	ENST00000600026	MSR1	P21757	451 aa		19.21	■□□□□ 0.67
LTBP4-227	ENST00000600026	GGTLC2	Q14390	218 aa		19.21	■□□□□ 0.67
LTBP4-227	ENST00000600026	KCNMB1	Q16558	191 aa		19.21	■□□□□ 0.67
LTBP4-227	ENST00000600026	NRN1L	Q496H8	165 aa		19.21	■□□□□ 0.67
LTBP4-227	ENST00000600026	RBM48	Q5RL73	367 aa	Known RBP	19.21	■□□□□ 0.67
LTBP4-227	ENST00000600026	OR7E24	Q6IFN5	339 aa		19.21	■□□□□ 0.67
LTBP4-227	ENST00000600026	LAIR2	Q6ISS4	152 aa		19.21	■□□□□ 0.67
LTBP4-227	ENST00000600026	B3GLCT	Q6Y288	498 aa		19.21	■□□□□ 0.67
LTBP4-227	ENST00000600026	ZNF511	Q8NB15	262 aa		19.21	■□□□□ 0.67
LTBP4-227	ENST00000600026	SLC26A10	Q8NG04	563 aa		19.21	■□□□□ 0.67
LTBP4-227	ENST00000600026	ZC3HAV1L	Q96H79	300 aa	Known RBP	19.21	■□□□□ 0.67
LTBP4-227	ENST00000600026	DACH2	Q96NX9	599 aa		19.21	■□□□□ 0.67
LTBP4-227	ENST00000600026	CNN2	Q99439	309 aa	Known RBP	19.21	■□□□□ 0.67
LTBP4-227	ENST00000600026	USB1	Q9BQ65	265 aa	Known RBP	19.21	■□□□□ 0.67
LTBP4-227	ENST00000600026	SIAE	Q9HAT2	523 aa		19.21	■□□□□ 0.67
LTBP4-227	ENST00000600026	POLE4	Q9NR33	117 aa		19.21	■□□□□ 0.67

Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms