RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 GTPBP1O00178 669 aaKnown RBP11.29□□□□□ -0.6
SCAF1-202ENST00000595242 ARPC3O15145 178 aa11.29□□□□□ -0.6
SCAF1-202ENST00000595242 LIMS3P0CW19 117 aa11.29□□□□□ -0.6
SCAF1-202ENST00000595242 LIMS4P0CW20 117 aa11.29□□□□□ -0.6
SCAF1-202ENST00000595242 CPEP16870 476 aa11.29□□□□□ -0.6
SCAF1-202ENST00000595242 HK1P19367 917 aa11.29□□□□□ -0.6
SCAF1-202ENST00000595242 SLC1A3P43003 542 aa11.29□□□□□ -0.6
SCAF1-202ENST00000595242 SERPINB10P48595 397 aa11.29□□□□□ -0.6
SCAF1-202ENST00000595242 CLK1P49759 484 aaKnown RBP11.29□□□□□ -0.6
SCAF1-202ENST00000595242 ENTPD1P49961 510 aa11.29□□□□□ -0.6
SCAF1-202ENST00000595242 TPBGQ13641 420 aa11.29□□□□□ -0.6
SCAF1-202ENST00000595242 ELOA3BQ3SY89 546 aa11.29□□□□□ -0.6
SCAF1-202ENST00000595242 ALKBH2Q6NS38 261 aa11.29□□□□□ -0.6
SCAF1-202ENST00000595242 TMEM81Q6P7N7 255 aa11.29□□□□□ -0.6
SCAF1-202ENST00000595242 MEPCEQ7L2J0 689 aaKnown RBP11.29□□□□□ -0.6
SCAF1-202ENST00000595242 CROCCP3Q8IVE0 287 aa11.29□□□□□ -0.6
SCAF1-202ENST00000595242 CPOQ8IVL8 374 aa11.29□□□□□ -0.6
SCAF1-202ENST00000595242 GATSQ8NAP1 163 aa11.29□□□□□ -0.6
SCAF1-202ENST00000595242 ELOA3Q8NG57 546 aa11.29□□□□□ -0.6
SCAF1-202ENST00000595242 OR52N1Q8NH53 320 aa11.29□□□□□ -0.6
SCAF1-202ENST00000595242 ZHX1-C8orf76Q96EF9 292 aa11.29□□□□□ -0.6
SCAF1-202ENST00000595242 IFT27Q9BW83 186 aa11.29□□□□□ -0.6
SCAF1-202ENST00000595242 RTN4RQ9BZR6 473 aa11.29□□□□□ -0.6
SCAF1-202ENST00000595242 ACTR6Q9GZN1 396 aa11.29□□□□□ -0.6
SCAF1-202ENST00000595242 SLIRPQ9GZT3 109 aaKnown RBP11.29□□□□□ -0.6
SCAF1-202ENST00000595242 NXF2Q9GZY0 626 aaKnown RBP11.29□□□□□ -0.6
SCAF1-202ENST00000595242 DCSTAMPQ9H295 470 aa11.29□□□□□ -0.6
SCAF1-202ENST00000595242 CHODLQ9H9P2 273 aa11.29□□□□□ -0.6
SCAF1-202ENST00000595242 SIAEQ9HAT2 523 aa11.29□□□□□ -0.6
SCAF1-202ENST00000595242 PALMDQ9NP74 551 aa11.29□□□□□ -0.6
SCAF1-202ENST00000595242 INPP5EQ9NRR6 644 aa11.29□□□□□ -0.6
SCAF1-202ENST00000595242 CHCHD3Q9NX63 227 aaKnown RBP11.29□□□□□ -0.6
SCAF1-202ENST00000595242 KLRF1Q9NZS2 232 aa11.29□□□□□ -0.6
SCAF1-202ENST00000595242 KLHL21Q9UJP4 597 aa11.29□□□□□ -0.6
SCAF1-202ENST00000595242 ZNF337Q9Y3M9 751 aa11.29□□□□□ -0.6
SCAF1-202ENST00000595242 HEATR1Q9H583 2144 aaKnown RBP11.29□□□□□ -0.6
SCAF1-202ENST00000595242 METTL15A6NJ78 407 aa11.28□□□□□ -0.6
SCAF1-202ENST00000595242 SLC22A31A6NKX4 558 aa11.28□□□□□ -0.6
SCAF1-202ENST00000595242 RIIAD1A6NNX1 92 aa11.28□□□□□ -0.6
SCAF1-202ENST00000595242 PRR23D1E9PI22 279 aaPredicted RBP11.28□□□□□ -0.6
SCAF1-202ENST00000595242 NDUFB5O43674 189 aa11.28□□□□□ -0.6
SCAF1-202ENST00000595242 IDH3BO43837 385 aa11.28□□□□□ -0.6
SCAF1-202ENST00000595242 PPP1R3DO95685 299 aa11.28□□□□□ -0.6
SCAF1-202ENST00000595242 IFNGP01579 166 aa11.28□□□□□ -0.6
SCAF1-202ENST00000595242 PRR23D2P0DMB1 279 aaPredicted RBP11.28□□□□□ -0.6
SCAF1-202ENST00000595242 IGHV4-31P0DP07 118 aa11.28□□□□□ -0.6
SCAF1-202ENST00000595242 APEHP13798 732 aaKnown RBP11.28□□□□□ -0.6
SCAF1-202ENST00000595242 PGCP20142 388 aa11.28□□□□□ -0.6
SCAF1-202ENST00000595242 TCEA1P23193 301 aaKnown RBP11.28□□□□□ -0.6
SCAF1-202ENST00000595242 SRD5A2P31213 254 aa11.28□□□□□ -0.6
SCAF1-202ENST00000595242 P2RX1P51575 399 aa11.28□□□□□ -0.6
SCAF1-202ENST00000595242 SUMO3P55854 103 aaPredicted RBP11.28□□□□□ -0.6
SCAF1-202ENST00000595242 PRPS1P60891 318 aa11.28□□□□□ -0.6
SCAF1-202ENST00000595242 BDH1Q02338 343 aa11.28□□□□□ -0.6
SCAF1-202ENST00000595242 SNTA1Q13424 505 aa11.28□□□□□ -0.6
SCAF1-202ENST00000595242 BCL2A1Q16548 175 aa11.28□□□□□ -0.6
SCAF1-202ENST00000595242 ZNF74Q16587 644 aa11.28□□□□□ -0.6
SCAF1-202ENST00000595242 ZNF829Q3KNS6 432 aaPredicted RBP11.28□□□□□ -0.6
SCAF1-202ENST00000595242 PAQR6Q6TCH4 344 aa11.28□□□□□ -0.6
SCAF1-202ENST00000595242 CLEC2AQ6UVW9 174 aa11.28□□□□□ -0.6
SCAF1-202ENST00000595242 DPY19L2P2Q6ZN68 376 aa11.28□□□□□ -0.6
SCAF1-202ENST00000595242 FAM214BQ7L5A3 538 aa11.28□□□□□ -0.6
SCAF1-202ENST00000595242 TMCO5AQ8N6Q1 288 aa11.28□□□□□ -0.6
SCAF1-202ENST00000595242 BBS1Q8NFJ9 593 aa11.28□□□□□ -0.6
SCAF1-202ENST00000595242 OR51A7Q8NH64 312 aa11.28□□□□□ -0.6
SCAF1-202ENST00000595242 OR5W2Q8NH69 310 aa11.28□□□□□ -0.6
SCAF1-202ENST00000595242 SGMS2Q8NHU3 365 aa11.28□□□□□ -0.6
SCAF1-202ENST00000595242 HGDQ93099 445 aa11.28□□□□□ -0.6
SCAF1-202ENST00000595242 BORCS5Q969J3 196 aa11.28□□□□□ -0.6
SCAF1-202ENST00000595242 DTNBP1Q96EV8 351 aa11.28□□□□□ -0.6
SCAF1-202ENST00000595242 C1orf159Q96HA4 380 aa11.28□□□□□ -0.6
SCAF1-202ENST00000595242 OR51E2Q9H255 320 aa11.28□□□□□ -0.6
SCAF1-202ENST00000595242 NRIP3Q9NQ35 241 aa11.28□□□□□ -0.6
SCAF1-202ENST00000595242 PLSCR4Q9NRQ2 329 aa11.28□□□□□ -0.6
SCAF1-202ENST00000595242 H2AFY2Q9P0M6 372 aaPredicted RBP11.28□□□□□ -0.6
SCAF1-202ENST00000595242 IL20RAQ9UHF4 553 aa11.28□□□□□ -0.6
SCAF1-202ENST00000595242 STUB1Q9UNE7 303 aa11.28□□□□□ -0.6
SCAF1-202ENST00000595242 HIF3AQ9Y2N7 669 aa11.28□□□□□ -0.6
SCAF1-202ENST00000595242 PMF1-BGLAPU3KQ54 211 aa11.28□□□□□ -0.6
SCAF1-202ENST00000595242 IMPA2O14732 288 aa11.27□□□□□ -0.61
SCAF1-202ENST00000595242 TCF21O43680 179 aa11.27□□□□□ -0.61
SCAF1-202ENST00000595242 CD8AP01732 235 aa11.27□□□□□ -0.61
SCAF1-202ENST00000595242 CD3EP07766 207 aa11.27□□□□□ -0.61
SCAF1-202ENST00000595242 ASAH2BP0C7U1 165 aa11.27□□□□□ -0.61
SCAF1-202ENST00000595242 HSMCR30P0CW71 290 aa11.27□□□□□ -0.61
SCAF1-202ENST00000595242 GAAP10253 952 aa11.27□□□□□ -0.61
SCAF1-202ENST00000595242 ZNF3P17036 446 aa11.27□□□□□ -0.61
SCAF1-202ENST00000595242 EVI2BP34910 448 aa11.27□□□□□ -0.61
SCAF1-202ENST00000595242 CLDN15P56746 228 aa11.27□□□□□ -0.61
SCAF1-202ENST00000595242 DSCR9P59020 149 aa11.27□□□□□ -0.61
SCAF1-202ENST00000595242 LSM3P62310 102 aaKnown RBP11.27□□□□□ -0.61
SCAF1-202ENST00000595242 EGR4Q05215 589 aa11.27□□□□□ -0.61
SCAF1-202ENST00000595242 POU4F2Q12837 409 aa11.27□□□□□ -0.61
SCAF1-202ENST00000595242 ITGADQ13349 1161 aa11.27□□□□□ -0.61
SCAF1-202ENST00000595242 GGTLC2Q14390 218 aa11.27□□□□□ -0.61
SCAF1-202ENST00000595242 GUSBP1Q15486 140 aa11.27□□□□□ -0.61
SCAF1-202ENST00000595242 ZNF672Q499Z4 452 aaPredicted RBP11.27□□□□□ -0.61
SCAF1-202ENST00000595242 PDLIM3Q53GG5 364 aaPredicted RBP11.27□□□□□ -0.61
SCAF1-202ENST00000595242 PLBD1Q6P4A8 553 aa11.27□□□□□ -0.61
SCAF1-202ENST00000595242 MARCH3Q86UD3 253 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms