RNA–Protein interactions for RNA: ENST00000590630.5

LIG3-213, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-213ENST00000590630 CDKN2AP42771 156 aaKnown RBP10.31□□□□□ -0.76
LIG3-213ENST00000590630 FABP6P51161 128 aa10.31□□□□□ -0.76
LIG3-213ENST00000590630 ARHGDIAP52565 204 aa10.31□□□□□ -0.76
LIG3-213ENST00000590630 PCBD1P61457 104 aa10.31□□□□□ -0.76
LIG3-213ENST00000590630 PLP2Q04941 152 aa10.31□□□□□ -0.76
LIG3-213ENST00000590630 RAB39AQ14964 217 aa10.31□□□□□ -0.76
LIG3-213ENST00000590630 CLEC12AQ5QGZ9 265 aa10.31□□□□□ -0.76
LIG3-213ENST00000590630 SHEQ5VZ18 495 aa10.31□□□□□ -0.76
LIG3-213ENST00000590630 DNM1P34Q6PK57 102 aa10.31□□□□□ -0.76
LIG3-213ENST00000590630 ZNF584Q8IVC4 421 aa10.31□□□□□ -0.76
LIG3-213ENST00000590630 GLB1L2Q8IW92 636 aa10.31□□□□□ -0.76
LIG3-213ENST00000590630 WACQ9BTA9 647 aa10.31□□□□□ -0.76
LIG3-213ENST00000590630 NUAK2Q9H093 628 aa10.31□□□□□ -0.76
LIG3-213ENST00000590630 ZNF442Q9H7R0 627 aa10.31□□□□□ -0.76
LIG3-213ENST00000590630 CCNB1IP1Q9NPC3 277 aa10.31□□□□□ -0.76
LIG3-213ENST00000590630 POLE4Q9NR33 117 aa10.31□□□□□ -0.76
LIG3-213ENST00000590630 CBLN4Q9NTU7 201 aa10.31□□□□□ -0.76
LIG3-213ENST00000590630 TBC1D23Q9NUY8 699 aa10.31□□□□□ -0.76
LIG3-213ENST00000590630 ARMC1Q9NVT9 282 aa10.31□□□□□ -0.76
LIG3-213ENST00000590630 PDP1Q9P0J1 537 aaPredicted RBP10.31□□□□□ -0.76
LIG3-213ENST00000590630 BAIAP2Q9UQB8 552 aa10.31□□□□□ -0.76
LIG3-213ENST00000590630 SPEF1Q9Y4P9 236 aa10.31□□□□□ -0.76
LIG3-213ENST00000590630 IQCMA0A1B0GVH7 501 aa10.3□□□□□ -0.76
LIG3-213ENST00000590630 C12orf71A8MTZ7 269 aa10.3□□□□□ -0.76
LIG3-213ENST00000590630 VSTM5A8MXK1 200 aa10.3□□□□□ -0.76
LIG3-213ENST00000590630 KHDRBS3O75525 346 aaKnown RBP10.3□□□□□ -0.76
LIG3-213ENST00000590630 RENP00797 406 aa10.3□□□□□ -0.76
LIG3-213ENST00000590630 BMP4P12644 408 aa10.3□□□□□ -0.76
LIG3-213ENST00000590630 ZNF32P17041 273 aa10.3□□□□□ -0.76
LIG3-213ENST00000590630 NR4A1P22736 598 aa10.3□□□□□ -0.76
LIG3-213ENST00000590630 LAP3P28838 519 aa10.3□□□□□ -0.76
LIG3-213ENST00000590630 PTH2RP49190 550 aa10.3□□□□□ -0.76
LIG3-213ENST00000590630 NKX6-1P78426 367 aaPredicted RBP10.3□□□□□ -0.76
LIG3-213ENST00000590630 GALK2Q01415 458 aa10.3□□□□□ -0.76
LIG3-213ENST00000590630 HSF2Q03933 536 aa10.3□□□□□ -0.76
LIG3-213ENST00000590630 HGFACQ04756 655 aa10.3□□□□□ -0.76
LIG3-213ENST00000590630 CCNIQ14094 377 aa10.3□□□□□ -0.76
LIG3-213ENST00000590630 DAG1Q14118 895 aa10.3□□□□□ -0.76
LIG3-213ENST00000590630 ETFDHQ16134 617 aa10.3□□□□□ -0.76
LIG3-213ENST00000590630 PABPC1L2AQ5JQF8 200 aa10.3□□□□□ -0.76
LIG3-213ENST00000590630 C11orf71Q6IPW1 123 aa10.3□□□□□ -0.76
LIG3-213ENST00000590630 LEG1Q6P5S2 330 aa10.3□□□□□ -0.76
LIG3-213ENST00000590630 PRSS57Q6UWY2 283 aa10.3□□□□□ -0.76
LIG3-213ENST00000590630 TMEM179BQ7Z7N9 219 aa10.3□□□□□ -0.76
LIG3-213ENST00000590630 SYT9Q86SS6 491 aa10.3□□□□□ -0.76
LIG3-213ENST00000590630 LNX2Q8N448 690 aa10.3□□□□□ -0.76
LIG3-213ENST00000590630 SLC30A7Q8NEW0 376 aa10.3□□□□□ -0.76
LIG3-213ENST00000590630 OR2T33Q8NG76 320 aa10.3□□□□□ -0.76
LIG3-213ENST00000590630 OR1J2Q8NGS2 313 aa10.3□□□□□ -0.76
LIG3-213ENST00000590630 OR4K13Q8NH42 304 aa10.3□□□□□ -0.76
LIG3-213ENST00000590630 FBXO17Q96EF6 278 aa10.3□□□□□ -0.76
LIG3-213ENST00000590630 NRBF2Q96F24 287 aa10.3□□□□□ -0.76
LIG3-213ENST00000590630 TRMT61AQ96FX7 289 aaKnown RBP10.3□□□□□ -0.76
LIG3-213ENST00000590630 PERPQ96FX8 193 aa10.3□□□□□ -0.76
LIG3-213ENST00000590630 DUS3LQ96G46 650 aaKnown RBP10.3□□□□□ -0.76
LIG3-213ENST00000590630 NMNAT3Q96T66 252 aa10.3□□□□□ -0.76
LIG3-213ENST00000590630 NIPSNAP1Q9BPW8 284 aa10.3□□□□□ -0.76
LIG3-213ENST00000590630 PLA2G12AQ9BZM1 189 aa10.3□□□□□ -0.76
LIG3-213ENST00000590630 ZNF556Q9HAH1 456 aa10.3□□□□□ -0.76
LIG3-213ENST00000590630 ACANP16112 2415 aa10.3□□□□□ -0.76
LIG3-213ENST00000590630 TIPRLO75663 272 aa10.29□□□□□ -0.76
LIG3-213ENST00000590630 SOX14O95416 240 aa10.29□□□□□ -0.76
LIG3-213ENST00000590630 SNAP29O95721 258 aa10.29□□□□□ -0.76
LIG3-213ENST00000590630 FCGR1AP12314 374 aa10.29□□□□□ -0.76
LIG3-213ENST00000590630 ANXA8P13928 327 aa10.29□□□□□ -0.76
LIG3-213ENST00000590630 SERPINF1P36955 418 aa10.29□□□□□ -0.76
LIG3-213ENST00000590630 ATP5J2P56134 94 aa10.29□□□□□ -0.76
LIG3-213ENST00000590630 LSM6P62312 80 aaKnown RBP10.29□□□□□ -0.76
LIG3-213ENST00000590630 ADAM8P78325 824 aa10.29□□□□□ -0.76
LIG3-213ENST00000590630 GLO1Q04760 184 aa10.29□□□□□ -0.76
LIG3-213ENST00000590630 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.29□□□□□ -0.76
LIG3-213ENST00000590630 SNTB2Q13425 540 aaKnown RBP10.29□□□□□ -0.76
LIG3-213ENST00000590630 ENDOGQ14249 297 aaKnown RBP10.29□□□□□ -0.76
LIG3-213ENST00000590630 ADIPOQQ15848 244 aa10.29□□□□□ -0.76
LIG3-213ENST00000590630 ATP6AP1Q15904 470 aa10.29□□□□□ -0.76
LIG3-213ENST00000590630 TBC1D28Q2M2D7 210 aa10.29□□□□□ -0.76
LIG3-213ENST00000590630 SHQ1Q6PI26 577 aaKnown RBP10.29□□□□□ -0.76
LIG3-213ENST00000590630 ALDH16A1Q8IZ83 802 aa10.29□□□□□ -0.76
LIG3-213ENST00000590630 OR52E2Q8NGJ4 325 aa10.29□□□□□ -0.76
LIG3-213ENST00000590630 OR8D4Q8NGM9 314 aa10.29□□□□□ -0.76
LIG3-213ENST00000590630 TEX47Q8TBZ9 253 aa10.29□□□□□ -0.76
LIG3-213ENST00000590630 DNAJC9Q8WXX5 260 aa10.29□□□□□ -0.76
LIG3-213ENST00000590630 UTP4Q969X6 686 aaKnown RBP10.29□□□□□ -0.76
LIG3-213ENST00000590630 BDH2Q9BUT1 245 aa10.29□□□□□ -0.76
LIG3-213ENST00000590630 ZNF416Q9BWM5 594 aa10.29□□□□□ -0.76
LIG3-213ENST00000590630 TSSK6Q9BXA6 273 aa10.29□□□□□ -0.76
LIG3-213ENST00000590630 OR2H1Q9GZK4 316 aa10.29□□□□□ -0.76
LIG3-213ENST00000590630 RACGAP1Q9H0H5 632 aa10.29□□□□□ -0.76
LIG3-213ENST00000590630 RERGLQ9H628 205 aa10.29□□□□□ -0.76
LIG3-213ENST00000590630 NTN4Q9HB63 628 aa10.29□□□□□ -0.76
LIG3-213ENST00000590630 RPRD1BQ9NQG5 326 aaKnown RBP10.29□□□□□ -0.76
LIG3-213ENST00000590630 FBXO9Q9UK97 447 aaPredicted RBP10.29□□□□□ -0.76
LIG3-213ENST00000590630 COA3Q9Y2R0 106 aaPredicted RBP10.29□□□□□ -0.76
LIG3-213ENST00000590630 AP4S1Q9Y587 144 aa10.29□□□□□ -0.76
LIG3-213ENST00000590630 TIMM10BQ9Y5J6 103 aa10.29□□□□□ -0.76
LIG3-213ENST00000590630 ZANQ9Y493 2812 aa10.28□□□□□ -0.76
LIG3-213ENST00000590630 IGLV1-36A0A0B4J1U3 117 aa10.28□□□□□ -0.76
LIG3-213ENST00000590630 OR6C68A6NDL8 312 aa10.28□□□□□ -0.76
LIG3-213ENST00000590630 H3BN98 237 aa10.28□□□□□ -0.76
LIG3-213ENST00000590630 H7C417 338 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms