RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 TMCC3Q9ULS5 477 aa9.02□□□□□ -0.97
SDF2-208ENST00000589788 F8P00451 2351 aa9.01□□□□□ -0.97
SDF2-208ENST00000589788 PLCE1Q9P212 2302 aa9.01□□□□□ -0.97
SDF2-208ENST00000589788 E7EQL1 145 aa9.01□□□□□ -0.97
SDF2-208ENST00000589788 CDC42EP2O14613 210 aa9.01□□□□□ -0.97
SDF2-208ENST00000589788 RAB36O95755 333 aa9.01□□□□□ -0.97
SDF2-208ENST00000589788 BAG2O95816 211 aa9.01□□□□□ -0.97
SDF2-208ENST00000589788 CST1P01037 141 aa9.01□□□□□ -0.97
SDF2-208ENST00000589788 IGKV3-15P01624 115 aa9.01□□□□□ -0.97
SDF2-208ENST00000589788 IGLV1-44P01699 117 aa9.01□□□□□ -0.97
SDF2-208ENST00000589788 IGHMP01871 453 aa9.01□□□□□ -0.97
SDF2-208ENST00000589788 OR8G3PP0DMU2 310 aa9.01□□□□□ -0.97
SDF2-208ENST00000589788 RRM2P31350 389 aa9.01□□□□□ -0.97
SDF2-208ENST00000589788 TTKP33981 857 aa9.01□□□□□ -0.97
SDF2-208ENST00000589788 IFNGR2P38484 337 aa9.01□□□□□ -0.97
SDF2-208ENST00000589788 PTDSS1P48651 473 aaKnown RBP9.01□□□□□ -0.97
SDF2-208ENST00000589788 ATP5J2P56134 94 aa9.01□□□□□ -0.97
SDF2-208ENST00000589788 NAAAQ02083 359 aa9.01□□□□□ -0.97
SDF2-208ENST00000589788 SLC34A1Q06495 639 aa9.01□□□□□ -0.97
SDF2-208ENST00000589788 SEC23BQ15437 767 aa9.01□□□□□ -0.97
SDF2-208ENST00000589788 HIST3H3Q16695 136 aa9.01□□□□□ -0.97
SDF2-208ENST00000589788 GSG1Q2KHT4 349 aa9.01□□□□□ -0.97
SDF2-208ENST00000589788 PGGHGQ32M88 737 aa9.01□□□□□ -0.97
SDF2-208ENST00000589788 Q5PR19 223 aa9.01□□□□□ -0.97
SDF2-208ENST00000589788 OR2T5Q6IEZ7 315 aa9.01□□□□□ -0.97
SDF2-208ENST00000589788 ZNF544Q6NX49 715 aa9.01□□□□□ -0.97
SDF2-208ENST00000589788 B3GLCTQ6Y288 498 aa9.01□□□□□ -0.97
SDF2-208ENST00000589788 SLC22A24Q8N4F4 322 aa9.01□□□□□ -0.97
SDF2-208ENST00000589788 OR2T29Q8NH02 315 aa9.01□□□□□ -0.97
SDF2-208ENST00000589788 IGFBPL1Q8WX77 278 aa9.01□□□□□ -0.97
SDF2-208ENST00000589788 HDAC2Q92769 488 aaKnown RBP9.01□□□□□ -0.97
SDF2-208ENST00000589788 MCHR2Q969V1 340 aa9.01□□□□□ -0.97
SDF2-208ENST00000589788 CENPNQ96H22 339 aaPredicted RBP9.01□□□□□ -0.97
SDF2-208ENST00000589788 RBP7Q96R05 134 aa9.01□□□□□ -0.97
SDF2-208ENST00000589788 PKP2Q99959 881 aa9.01□□□□□ -0.97
SDF2-208ENST00000589788 BDH2Q9BUT1 245 aa9.01□□□□□ -0.97
SDF2-208ENST00000589788 TRAF4Q9BUZ4 470 aaPredicted RBP9.01□□□□□ -0.97
SDF2-208ENST00000589788 ALG12Q9BV10 488 aa9.01□□□□□ -0.97
SDF2-208ENST00000589788 MRPL13Q9BYD1 178 aaKnown RBP9.01□□□□□ -0.97
SDF2-208ENST00000589788 TMEM38BQ9NVV0 291 aa9.01□□□□□ -0.97
SDF2-208ENST00000589788 GRHPRQ9UBQ7 328 aa9.01□□□□□ -0.97
SDF2-208ENST00000589788 NKX1-2Q9UD57 310 aaPredicted RBP9.01□□□□□ -0.97
SDF2-208ENST00000589788 ZNF346Q9UL40 294 aaKnown RBP9.01□□□□□ -0.97
SDF2-208ENST00000589788 ITPR3Q14573 2671 aa9□□□□□ -0.97
SDF2-208ENST00000589788 USF3Q68DE3 2245 aa9□□□□□ -0.97
SDF2-208ENST00000589788 MED13LQ71F56 2210 aa9□□□□□ -0.97
SDF2-208ENST00000589788 SH3PXD2BA1X283 911 aa9□□□□□ -0.97
SDF2-208ENST00000589788 ZNF503-AS2A6NEH8 195 aa9□□□□□ -0.97
SDF2-208ENST00000589788 UNC119BA6NIH7 251 aa9□□□□□ -0.97
SDF2-208ENST00000589788 XKRYO14609 159 aa9□□□□□ -0.97
SDF2-208ENST00000589788 OR10H3O60404 316 aa9□□□□□ -0.97
SDF2-208ENST00000589788 UBL3O95164 117 aa9□□□□□ -0.97
SDF2-208ENST00000589788 NDUFB2O95178 105 aa9□□□□□ -0.97
SDF2-208ENST00000589788 CD14P08571 375 aa9□□□□□ -0.97
SDF2-208ENST00000589788 CELA3BP08861 270 aa9□□□□□ -0.97
SDF2-208ENST00000589788 CD99P14209 185 aa9□□□□□ -0.97
SDF2-208ENST00000589788 GUCA1AP43080 201 aaPredicted RBP9□□□□□ -0.97
SDF2-208ENST00000589788 OMPP47874 163 aa9□□□□□ -0.97
SDF2-208ENST00000589788 ERVK-25P63136 954 aa9□□□□□ -0.97
SDF2-208ENST00000589788 FMODQ06828 376 aa9□□□□□ -0.97
SDF2-208ENST00000589788 FHL1Q13642 323 aa9□□□□□ -0.97
SDF2-208ENST00000589788 GK3PQ14409 553 aa9□□□□□ -0.97
SDF2-208ENST00000589788 TMEM53Q6P2H8 277 aa9□□□□□ -0.97
SDF2-208ENST00000589788 DPPA2Q7Z7J5 298 aa9□□□□□ -0.97
SDF2-208ENST00000589788 DTX2Q86UW9 622 aa9□□□□□ -0.97
SDF2-208ENST00000589788 SKA3Q8IX90 412 aa9□□□□□ -0.97
SDF2-208ENST00000589788 MUC15Q8N387 334 aa9□□□□□ -0.97
SDF2-208ENST00000589788 LRRC75AQ8NAA5 344 aa9□□□□□ -0.97
SDF2-208ENST00000589788 WFDC11Q8NEX6 87 aa9□□□□□ -0.97
SDF2-208ENST00000589788 IL17RDQ8NFM7 739 aa9□□□□□ -0.97
SDF2-208ENST00000589788 OR4F15Q8NGB8 312 aa9□□□□□ -0.97
SDF2-208ENST00000589788 FNDC8Q8TC99 324 aa9□□□□□ -0.97
SDF2-208ENST00000589788 TSPAN32Q96QS1 320 aa9□□□□□ -0.97
SDF2-208ENST00000589788 SH3GL3Q99963 347 aa9□□□□□ -0.97
SDF2-208ENST00000589788 KCNN2Q9H2S1 579 aa9□□□□□ -0.97
SDF2-208ENST00000589788 SMURF2Q9HAU4 748 aa9□□□□□ -0.97
SDF2-208ENST00000589788 CBLN4Q9NTU7 201 aa9□□□□□ -0.97
SDF2-208ENST00000589788 ZNF701Q9NV72 531 aaPredicted RBP9□□□□□ -0.97
SDF2-208ENST00000589788 B3GNT2Q9NY97 397 aa9□□□□□ -0.97
SDF2-208ENST00000589788 FBXL3Q9UKT7 428 aa9□□□□□ -0.97
SDF2-208ENST00000589788 SIGLEC7Q9Y286 467 aa9□□□□□ -0.97
SDF2-208ENST00000589788 CSMD2Q7Z408 3487 aa8.99□□□□□ -0.97
SDF2-208ENST00000589788 TRAV20A0A0B4J274 112 aa8.99□□□□□ -0.97
SDF2-208ENST00000589788 VSTM5A8MXK1 200 aa8.99□□□□□ -0.97
SDF2-208ENST00000589788 OVOL3O00110 214 aa8.99□□□□□ -0.97
SDF2-208ENST00000589788 GNGT2O14610 69 aa8.99□□□□□ -0.97
SDF2-208ENST00000589788 CASQ2O14958 399 aaPredicted RBP8.99□□□□□ -0.97
SDF2-208ENST00000589788 SLC2A10O95528 541 aa8.99□□□□□ -0.97
SDF2-208ENST00000589788 CD8AP01732 235 aa8.99□□□□□ -0.97
SDF2-208ENST00000589788 PAX1P15863 534 aa8.99□□□□□ -0.97
SDF2-208ENST00000589788 APOBEC3AP31941 199 aaPredicted RBP8.99□□□□□ -0.97
SDF2-208ENST00000589788 CDKN1AP38936 164 aa8.99□□□□□ -0.97
SDF2-208ENST00000589788 LIMS1P48059 325 aa8.99□□□□□ -0.97
SDF2-208ENST00000589788 ZNF133P52736 654 aaPredicted RBP8.99□□□□□ -0.97
SDF2-208ENST00000589788 RAB1AP62820 205 aa8.99□□□□□ -0.97
SDF2-208ENST00000589788 SLC36A2Q495M3 483 aa8.99□□□□□ -0.97
SDF2-208ENST00000589788 NRN1LQ496H8 165 aa8.99□□□□□ -0.97
SDF2-208ENST00000589788 FAM209AQ5JX71 171 aa8.99□□□□□ -0.97
SDF2-208ENST00000589788 THEM4Q5T1C6 240 aa8.99□□□□□ -0.97
SDF2-208ENST00000589788 C10orf128Q5T292 105 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms