RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 GMPPAQ96IJ6 420 aaPredicted RBP19.68■□□□□ 0.74
ATG4D-209ENST00000588857 CDADC1Q9BWV3 514 aa19.68■□□□□ 0.74
ATG4D-209ENST00000588857 TTTY10Q9BZA0 68 aa19.68■□□□□ 0.74
ATG4D-209ENST00000588857 SLCO5A1Q9H2Y9 848 aa19.68■□□□□ 0.74
ATG4D-209ENST00000588857 ISG20L2Q9H9L3 353 aaKnown RBP19.68■□□□□ 0.74
ATG4D-209ENST00000588857 ARHGAP21Q5T5U3 1957 aa19.68■□□□□ 0.74
ATG4D-209ENST00000588857 J3QLW9 94 aa19.67■□□□□ 0.74
ATG4D-209ENST00000588857 SCG5P05408 212 aa19.67■□□□□ 0.74
ATG4D-209ENST00000588857 TPOP07202 933 aa19.67■□□□□ 0.74
ATG4D-209ENST00000588857 ZNF19P17023 458 aa19.67■□□□□ 0.74
ATG4D-209ENST00000588857 ALOX5APP20292 161 aa19.67■□□□□ 0.74
ATG4D-209ENST00000588857 CDAP32320 146 aa19.67■□□□□ 0.74
ATG4D-209ENST00000588857 RPS27P42677 84 aaKnown RBP19.67■□□□□ 0.74
ATG4D-209ENST00000588857 CAPZA2P47755 286 aa19.67■□□□□ 0.74
ATG4D-209ENST00000588857 MLLT11Q13015 90 aaPredicted RBP19.67■□□□□ 0.74
ATG4D-209ENST00000588857 ACSF3Q4G176 576 aaPredicted RBP19.67■□□□□ 0.74
ATG4D-209ENST00000588857 RIPPLY2Q5TAB7 128 aa19.67■□□□□ 0.74
ATG4D-209ENST00000588857 SLC18B1Q6NT16 456 aa19.67■□□□□ 0.74
ATG4D-209ENST00000588857 ZNF454Q8N9F8 522 aa19.67■□□□□ 0.74
ATG4D-209ENST00000588857 ZNF485Q8NCK3 441 aa19.67■□□□□ 0.74
ATG4D-209ENST00000588857 APH1AQ96BI3 265 aa19.67■□□□□ 0.74
ATG4D-209ENST00000588857 SNRNP40Q96DI7 357 aaKnown RBP19.67■□□□□ 0.74
ATG4D-209ENST00000588857 C4orf36Q96KX1 117 aa19.67■□□□□ 0.74
ATG4D-209ENST00000588857 DOCK7Q96N67 2140 aa19.67■□□□□ 0.74
ATG4D-209ENST00000588857 CRLF2Q9HC73 371 aa19.67■□□□□ 0.74
ATG4D-209ENST00000588857 ISYNA1Q9NPH2 558 aa19.67■□□□□ 0.74
ATG4D-209ENST00000588857 KCNG2Q9UJ96 466 aa19.67■□□□□ 0.74
ATG4D-209ENST00000588857 CEPT1Q9Y6K0 416 aa19.67■□□□□ 0.74
ATG4D-209ENST00000588857 CACNA1CQ13936 2221 aa19.67■□□□□ 0.74
ATG4D-209ENST00000588857 GABRA1P14867 456 aa19.66■□□□□ 0.74
ATG4D-209ENST00000588857 LIPAP38571 399 aa19.66■□□□□ 0.74
ATG4D-209ENST00000588857 TSTQ16762 297 aaKnown RBP19.66■□□□□ 0.74
ATG4D-209ENST00000588857 CDONQ4KMG0 1287 aa19.66■□□□□ 0.74
ATG4D-209ENST00000588857 TEX30Q5JUR7 227 aa19.66■□□□□ 0.74
ATG4D-209ENST00000588857 ZC3HAV1Q7Z2W4 902 aaKnown RBP19.66■□□□□ 0.74
ATG4D-209ENST00000588857 ZNF100Q8IYN0 542 aa19.66■□□□□ 0.74
ATG4D-209ENST00000588857 SYS1Q8N2H4 156 aa19.66■□□□□ 0.74
ATG4D-209ENST00000588857 DGCR14Q96DF8 476 aaKnown RBP19.66■□□□□ 0.74
ATG4D-209ENST00000588857 OPALINQ96PE5 141 aa19.66■□□□□ 0.74
ATG4D-209ENST00000588857 LINC00470Q9BZP3 86 aa19.66■□□□□ 0.74
ATG4D-209ENST00000588857 BABAM2Q9NXR7 383 aa19.66■□□□□ 0.74
ATG4D-209ENST00000588857 KLHDC2Q9Y2U9 406 aa19.66■□□□□ 0.74
ATG4D-209ENST00000588857 UGT2A1Q9Y4X1 527 aa19.66■□□□□ 0.74
ATG4D-209ENST00000588857 FREM1Q5H8C1 2179 aa19.66■□□□□ 0.74
ATG4D-209ENST00000588857 ABOP16442 354 aa19.66■□□□□ 0.74
ATG4D-209ENST00000588857 CD36P16671 472 aa19.66■□□□□ 0.74
ATG4D-209ENST00000588857 AGTR1P30556 359 aa19.66■□□□□ 0.74
ATG4D-209ENST00000588857 RGS6P49758 472 aa19.66■□□□□ 0.74
ATG4D-209ENST00000588857 TDGF1P3P51864 188 aa19.66■□□□□ 0.74
ATG4D-209ENST00000588857 OR12D2P58182 307 aa19.66■□□□□ 0.74
ATG4D-209ENST00000588857 DOC2BQ14184 412 aa19.66■□□□□ 0.74
ATG4D-209ENST00000588857 EIF2B1Q14232 305 aaKnown RBP19.66■□□□□ 0.74
ATG4D-209ENST00000588857 TP53I3Q53FA7 332 aa19.66■□□□□ 0.74
ATG4D-209ENST00000588857 FOXB2Q5VYV0 432 aa19.66■□□□□ 0.74
ATG4D-209ENST00000588857 PLEKHG7Q6ZR37 379 aa19.66■□□□□ 0.74
ATG4D-209ENST00000588857 KLBQ86Z14 1044 aa19.66■□□□□ 0.74
ATG4D-209ENST00000588857 ASB17Q8WXJ9 295 aa19.66■□□□□ 0.74
ATG4D-209ENST00000588857 YIPF6Q96EC8 236 aa19.66■□□□□ 0.74
ATG4D-209ENST00000588857 ALKBH3Q96Q83 286 aaPredicted RBP19.66■□□□□ 0.74
ATG4D-209ENST00000588857 TTYH2Q9BSA4 534 aa19.66■□□□□ 0.74
ATG4D-209ENST00000588857 FUNDC2Q9BWH2 189 aa19.66■□□□□ 0.74
ATG4D-209ENST00000588857 RBM38Q9H0Z9 239 aaKnown RBP19.66■□□□□ 0.74
ATG4D-209ENST00000588857 POLE4Q9NR33 117 aa19.66■□□□□ 0.74
ATG4D-209ENST00000588857 GNG8Q9UK08 70 aa19.66■□□□□ 0.74
ATG4D-209ENST00000588857 POLR1DQ9Y2S0 133 aa19.66■□□□□ 0.74
ATG4D-209ENST00000588857 FIGNL2A6NMB9 653 aa19.65■□□□□ 0.74
ATG4D-209ENST00000588857 CCRL2O00421 344 aa19.65■□□□□ 0.74
ATG4D-209ENST00000588857 NOL3O60936 208 aaKnown RBP19.65■□□□□ 0.74
ATG4D-209ENST00000588857 WDR1O75083 606 aa19.65■□□□□ 0.74
ATG4D-209ENST00000588857 SS18L1O75177 396 aaPredicted RBP19.65■□□□□ 0.74
ATG4D-209ENST00000588857 TACSTD2P09758 323 aa19.65■□□□□ 0.74
ATG4D-209ENST00000588857 PLA2G2AP14555 144 aa19.65■□□□□ 0.74
ATG4D-209ENST00000588857 PTGER4P35408 488 aa19.65■□□□□ 0.74
ATG4D-209ENST00000588857 EGR3Q06889 387 aa19.65■□□□□ 0.74
ATG4D-209ENST00000588857 ACSM1Q08AH1 577 aa19.65■□□□□ 0.74
ATG4D-209ENST00000588857 KCNMB1Q16558 191 aa19.65■□□□□ 0.74
ATG4D-209ENST00000588857 SGCAQ16586 387 aa19.65■□□□□ 0.74
ATG4D-209ENST00000588857 PCK2Q16822 640 aa19.65■□□□□ 0.74
ATG4D-209ENST00000588857 NSUN5P2Q63ZY6 315 aa19.65■□□□□ 0.74
ATG4D-209ENST00000588857 OR2A2Q6IF42 318 aa19.65■□□□□ 0.74
ATG4D-209ENST00000588857 RPTNQ6XPR3 784 aa19.65■□□□□ 0.74
ATG4D-209ENST00000588857 KCTD20Q7Z5Y7 419 aa19.65■□□□□ 0.74
ATG4D-209ENST00000588857 FAM57AQ8TBR7 257 aa19.65■□□□□ 0.74
ATG4D-209ENST00000588857 CPT1CQ8TCG5 803 aa19.65■□□□□ 0.74
ATG4D-209ENST00000588857 TM9SF2Q99805 663 aa19.65■□□□□ 0.74
ATG4D-209ENST00000588857 SLX1AQ9BQ83 275 aa19.65■□□□□ 0.74
ATG4D-209ENST00000588857 GPR35Q9HC97 309 aa19.65■□□□□ 0.74
ATG4D-209ENST00000588857 EMC7Q9NPA0 242 aa19.65■□□□□ 0.74
ATG4D-209ENST00000588857 TRIM36Q9NQ86 728 aa19.65■□□□□ 0.74
ATG4D-209ENST00000588857 CD8B2A6NJW9 211 aa19.64■□□□□ 0.73
ATG4D-209ENST00000588857 MAGEB4O15481 346 aaPredicted RBP19.64■□□□□ 0.73
ATG4D-209ENST00000588857 IGHV3-9P01782 118 aa19.64■□□□□ 0.73
ATG4D-209ENST00000588857 KRT8P05787 483 aa19.64■□□□□ 0.73
ATG4D-209ENST00000588857 PSKH1P11801 424 aa19.64■□□□□ 0.73
ATG4D-209ENST00000588857 MSR1P21757 451 aa19.64■□□□□ 0.73
ATG4D-209ENST00000588857 ROR2Q01974 943 aaKnown RBP19.64■□□□□ 0.73
ATG4D-209ENST00000588857 TSPO2Q5TGU0 170 aa19.64■□□□□ 0.73
ATG4D-209ENST00000588857 FOXL2NBQ6ZUU3 175 aa19.64■□□□□ 0.73
ATG4D-209ENST00000588857 VASH1Q7L8A9 365 aaPredicted RBP19.64■□□□□ 0.73
ATG4D-209ENST00000588857 NUFIP2Q7Z417 695 aaKnown RBP19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms